[Debian-med-packaging] Bug#986768: snakemake: autopkgtest regression: Missing input files for rule remote_ancient

[Paul Gevers]

Source: snakemake
Version: 5.24.1-1
User: debian-ci at lists.debian.org
Usertags: regression
X-Debbugs-CC: debian-ci at lists.debian.org

Dear maintainer,

Your package has an autopkgtest, great! However, the last couple of days
it started to fail [1]. Looking at the error, it seems a remote file has
disappeared. Can you investigate and fix the situation? Additionally, if
your test needs internet, it must set the needs-internet restriction.

Paul

[1] https://ci.debian.net/packages/s/snakemake/

https://ci.debian.net/data/autopkgtest/testing/amd64/s/snakemake/11609476/log.gz

----------------------------- Captured stderr call
-----------------------------
Building DAG of jobs...
Full Traceback (most recent call last):
  File
"/tmp/autopkgtest-lxc.q0choluk/downtmp/build.FZs/src/snakemake/__init__.py",
line 643, in snakemake
    success = workflow.execute(
  File
"/tmp/autopkgtest-lxc.q0choluk/downtmp/build.FZs/src/snakemake/workflow.py",
line 672, in execute
    dag.init()
  File
"/tmp/autopkgtest-lxc.q0choluk/downtmp/build.FZs/src/snakemake/dag.py",
line 177, in init
    job = self.update(self.file2jobs(file), file=file, progress=progress)
  File
"/tmp/autopkgtest-lxc.q0choluk/downtmp/build.FZs/src/snakemake/dag.py",
line 753, in update
    raise exceptions[0]
  File
"/tmp/autopkgtest-lxc.q0choluk/downtmp/build.FZs/src/snakemake/dag.py",
line 711, in update
    self.update_(
  File
"/tmp/autopkgtest-lxc.q0choluk/downtmp/build.FZs/src/snakemake/dag.py",
line 848, in update_
    raise MissingInputException(job.rule, missing_input)
snakemake.exceptions.MissingInputException: Missing input files for rule
remote_ancient:
github.com/snakemake/snakemake/raw/master/tests/test_remote_http/expected-results/landsat-data.txt

MissingInputException in line 38 of /tmp/snakemake-s4m7gneh/Snakefile:
Missing input files for rule remote_ancient:
github.com/snakemake/snakemake/raw/master/tests/test_remote_http/expected-results/landsat-data.txt
unlocking
removed all locks
------------------------------ Captured log call
-------------------------------
WARNING  snakemake.logging:logging.py:373 Building DAG of jobs...
DEBUG    snakemake.logging:logging.py:379 Full Traceback (most recent
call last):
  File
"/tmp/autopkgtest-lxc.q0choluk/downtmp/build.FZs/src/snakemake/__init__.py",
line 643, in snakemake
    success = workflow.execute(
  File
"/tmp/autopkgtest-lxc.q0choluk/downtmp/build.FZs/src/snakemake/workflow.py",
line 672, in execute
    dag.init()
  File
"/tmp/autopkgtest-lxc.q0choluk/downtmp/build.FZs/src/snakemake/dag.py",
line 177, in init
    job = self.update(self.file2jobs(file), file=file, progress=progress)
  File
"/tmp/autopkgtest-lxc.q0choluk/downtmp/build.FZs/src/snakemake/dag.py",
line 753, in update
    raise exceptions[0]
  File
"/tmp/autopkgtest-lxc.q0choluk/downtmp/build.FZs/src/snakemake/dag.py",
line 711, in update
    self.update_(
  File
"/tmp/autopkgtest-lxc.q0choluk/downtmp/build.FZs/src/snakemake/dag.py",
line 848, in update_
    raise MissingInputException(job.rule, missing_input)
snakemake.exceptions.MissingInputException: Missing input files for rule
remote_ancient:
github.com/snakemake/snakemake/raw/master/tests/test_remote_http/expected-results/landsat-data.txt

ERROR    snakemake.logging:logging.py:377 MissingInputException in line
38 of /tmp/snakemake-s4m7gneh/Snakefile:
Missing input files for rule remote_ancient:
github.com/snakemake/snakemake/raw/master/tests/test_remote_http/expected-results/landsat-data.txt


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