[Debian-med-packaging] Bug#1001284: python-pysam: libhts-dev build dependency must be bumped to >= 1.14

Adrian Bunk bunk at debian.org
Tue Dec 7 17:51:17 GMT 2021


Source: python-pysam
Version: 0.18.0+ds-1~exp1
Severity: serious
Tags: ftbfs

https://buildd.debian.org/status/fetch.php?pkg=python-pysam&arch=amd64&ver=0.18.0%2Bds-1~exp1&stamp=1638890599&raw=0

...
samtools/bam_import.c.pysam.c: In function ‘import_fastq’:
samtools/bam_import.c.pysam.c:182:35: error: ‘FASTQ_OPT_NAME2’ undeclared (first use in this function); did you mean ‘FASTQ_OPT_RNUM’?
  182 |             hts_set_opt(fp_in[i], FASTQ_OPT_NAME2, 1);
      |                                   ^~~~~~~~~~~~~~~
...


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