[Debian-med-packaging] Bug#979727: racon: FTBFS: fatal error: bioparser/bioparser.hpp: No such file or directory

[Sebastian Ramacher]

Source: racon
Version: 1.4.13-2
Severity: serious
Tags: ftbfs sid bullseye
Justification: fails to build from source (but built successfully in the past)
X-Debbugs-Cc: sramacher at debian.org

|  28%] Building CXX object CMakeFiles/racon.dir/src/main.cpp.o
| /usr/bin/c++ -DRACON_VERSION=\"v1.4.13\" -I/<<PKGBUILDDIR>>/src -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/config -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -pthread -std=c++11 -o CMakeFiles/racon.dir/src/main.cpp.o -c /<<PKGBUILDDIR>>/src/main.cpp
| /<<PKGBUILDDIR>>/test/racon_test.cpp:13:10: fatal error: bioparser/bioparser.hpp: No such file or directory
|    13 | #include "bioparser/bioparser.hpp"
|       |          ^~~~~~~~~~~~~~~~~~~~~~~~~
| compilation terminated.
| make[3]: *** [CMakeFiles/racon_test.dir/build.make:85: CMakeFiles/racon_test.dir/test/racon_test.cpp.o] Error 1
| make[3]: *** Waiting for unfinished jobs....
| [ 35%] Building CXX object CMakeFiles/racon.dir/src/logger.cpp.o
| /usr/bin/c++ -DRACON_VERSION=\"v1.4.13\" -I/<<PKGBUILDDIR>>/src -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/config -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -pthread -std=c++11 -o CMakeFiles/racon.dir/src/logger.cpp.o -c /<<PKGBUILDDIR>>/src/logger.cpp
| /<<PKGBUILDDIR>>/src/polisher.cpp:20:10: fatal error: bioparser/bioparser.hpp: No such file or directory
|    20 | #include "bioparser/bioparser.hpp"
|       |          ^~~~~~~~~~~~~~~~~~~~~~~~~
| compilation terminated.
| make[3]: *** [CMakeFiles/racon_test.dir/build.make:111: CMakeFiles/racon_test.dir/src/polisher.cpp.o] Error 1
| [ 42%] Building CXX object CMakeFiles/racon.dir/src/polisher.cpp.o
| /usr/bin/c++ -DRACON_VERSION=\"v1.4.13\" -I/<<PKGBUILDDIR>>/src -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/config -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -pthread -std=c++11 -o CMakeFiles/racon.dir/src/polisher.cpp.o -c /<<PKGBUILDDIR>>/src/polisher.cpp
| /<<PKGBUILDDIR>>/src/polisher.cpp:20:10: fatal error: bioparser/bioparser.hpp: No such file or directory
|    20 | #include "bioparser/bioparser.hpp"
|       |          ^~~~~~~~~~~~~~~~~~~~~~~~~
| compilation terminated.
| make[3]: *** [CMakeFiles/racon.dir/build.make:111: CMakeFiles/racon.dir/src/polisher.cpp.o] Error 1

See
https://buildd.debian.org/status/fetch.php?pkg=racon&arch=amd64&ver=1.4.13-2%2Bb1&stamp=1610291712&raw=0

Cheers
-- 
Sebastian Ramacher
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