[Debian-med-packaging] Freebayes and bio-vcf (Was: Released sambamba 0.8.0)

[Juhani Numminen]

Andreas Tille kirjoitti 18.1.2021 klo 22.38:
> Hi Juhani,
> 
> On Mon, Jan 18, 2021 at 08:11:14PM +0200, Juhani Numminen wrote:
>> I updated freebayes with "routine-update", discarded all pre-existing
>> debian patches and wrote a new patch; now we can build with meson.
>>
>> https://salsa.debian.org/med-team/freebayes
>>
>> The patch may not be fit for upstream as-is because it does not cater
>> for those who want to use the embedded source copies. But for those
>> interested, here is a direct link to the changes to use system libs.
>>
>> https://salsa.debian.org/med-team/freebayes/-/blob/master/debian/patches/libraries.patch
> 
> Really great, thanks a lot - I've uploaded your nice work.
> 
> Thanks again, Andreas.
> 

Hi,

Some build failures popped up, but they should be resolved by letting the
tests run longer – there was a 30sec timeout and that is just too tight.

Requesting sponsorship for freebayes 1.3.3-2:

 * Team upload
 * Fix FTBFS caused by too quick timeouts for tests
 * Add release notes to installed documentation
 * Update libraries.patch header to link to a related pull request

https://salsa.debian.org/med-team/freebayes


Thanks,
Juhani