[Debian-med-packaging] Bug#981295: ITP: bio-vcf -- domain specific language (DSL) for processing the VCF format

[Andreas Tille]

Package: wnpp
Severity: wishlist

Subject: ITP: bio-vcf -- domain specific language (DSL) for processing the VCF format
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist

* Package name    : bio-vcf
  Version         : 0.9.5
  Upstream Author : Pjotr Prins <pjotr.public68 at thebird.nl>
* URL             : https://rubygems.org/gems/bio-vcf/
* License         : MIT
  Programming Lang: (C, C++, C#, Perl, Python, etc.)
  Description     : domain specific language (DSL) for processing the VCF format
 Bio-vcf provides a domain specific language (DSL) for processing the
 VCF format. Record named fields can be queried with regular
 expressions, e.g.
 .
  sample.dp>20 and rec.filter !~ /LowQD/ and rec.tumor.bcount[rec.alt]>4
 .
 Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf
 is not only very fast for genome-wide (WGS) data, it also comes with a
 really nice filtering, evaluation and rewrite language and it can
 output any type of textual data, including VCF header and contents in
 RDF and JSON.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/bio-vcf