[Debian-med-packaging] Bug#990896: ITP: python-pyspoa -- Python bindings to spoa

Nilesh Patra nilesh at debian.org
Sat Jul 10 19:45:51 BST 2021


Package: wnpp
Severity: wishlist
X-Debbugs-Cc: nilesh at debian.org

Subject: ITP: python-pyspoa -- Python bindings to spoa
Package: wnpp
Owner: Nilesh Patra <nilesh at debian.org>
Severity: wishlist

* Package name    : python-pyspoa
  Version         : 0.0.8
  Upstream Author : Oxford Nanopore Technologies
* URL             : https://github.com/nanoporetech/pyspoa
* License         : Expat
  Programming Lang: Python
  Description     : Python bindings to spoa
 Spoa (SIMD POA) is a c++ implementation of the partial order alignment
 (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which
 is used to generate consensus sequences (as described in
 10.1093/bioinformatics/btg109). It supports three alignment modes: local
 (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment
 (overlap).
 .
 This package presents Python bindings for the spoa library

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/python-pyspoa



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