[Debian-med-packaging] Bug#990896: ITP: python-pyspoa -- Python bindings to spoa
Nilesh Patra
nilesh at debian.org
Sat Jul 10 19:45:51 BST 2021
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: nilesh at debian.org
Subject: ITP: python-pyspoa -- Python bindings to spoa
Package: wnpp
Owner: Nilesh Patra <nilesh at debian.org>
Severity: wishlist
* Package name : python-pyspoa
Version : 0.0.8
Upstream Author : Oxford Nanopore Technologies
* URL : https://github.com/nanoporetech/pyspoa
* License : Expat
Programming Lang: Python
Description : Python bindings to spoa
Spoa (SIMD POA) is a c++ implementation of the partial order alignment
(POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which
is used to generate consensus sequences (as described in
10.1093/bioinformatics/btg109). It supports three alignment modes: local
(Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment
(overlap).
.
This package presents Python bindings for the spoa library
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/python-pyspoa
More information about the Debian-med-packaging
mailing list