[Debian-med-packaging] Bug#989961: picard-tools: Wrong classpath in PicardCommandLine

[Andreas Tille]

On Wed, Jun 16, 2021 at 10:00:25PM +0200, Vincent Danjean wrote:
>   The package correctly depends on libcommons-math3-java,
> but /usr/share/java/commons-math3.jar is not added in the classpath
> in /usr/bin/PicardCommandLine, leading to errors (in some situations)
> such as:
> [Tue Jun 15 15:59:20 CEST 2021] picard.analysis.CollectWgsMetrics done. Elapsed time: 135.31 minutes.
> Runtime.totalMemory()=6954156032
> To get help, see http://broadinstitute.github.io/picard/index.html#GettingHelp
> ...

I wonder whether this is a grave issue and should be fixed in testing?

Kind regards

        Andreas.

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