[Debian-med-packaging] Bug#1000423: python-biom-format: FTBFS with Python 3.10 - Test failures

[Stefano Rivera]

Source: python-biom-format
Version: 2.1.10-2
Severity: serious
Tags: upstream
Justification: FTBFS
Block -1 with 1000422

python-biom-format FTBFS with Python 3.10:
=========================== short test summary info ============================
ERROR biom/tests/test_err.py
ERROR biom/tests/test_parse.py
ERROR biom/tests/test_table.py
ERROR biom/tests/test_util.py
ERROR biom/tests/test_cli/test_add_metadata.py
ERROR biom/tests/test_cli/test_show_install_info.py
ERROR biom/tests/test_cli/test_subset_table.py
ERROR biom/tests/test_cli/test_summarize_table.py
ERROR biom/tests/test_cli/test_table_converter.py
ERROR biom/tests/test_cli/test_table_normalizer.py
ERROR biom/tests/test_cli/test_uc_processor.py
ERROR biom/tests/test_cli/test_validate_table.py
!!!!!!!!!!!!!!!!!!! Interrupted: 12 errors during collection !!!!!!!!!!!!!!!!!!!
============================== 12 errors in 2.27s ==============================
E: pybuild pybuild:354: test: plugin distutils failed with: exit code=2: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_biom-format/build; python3.10 -m pytest

See: https://buildd.debian.org/status/fetch.php?pkg=python-biom-format&arch=amd64&ver=2.1.10-2%2Bb1&stamp=1637570066&raw=0

I adapted an upstream patch, in https://salsa.debian.org/med-team/python-biom-format/-/merge_requests/1

But it still doesn't build because we need pandas, first.

SR