[Debian-med-packaging] Bug#997000: Bug#997000: snakemake: please make the build reproducible

Nilesh Patra nilesh at onenetbeyond.org
Fri Oct 22 13:44:07 BST 2021


On 10/22/21 1:56 PM, Chris Lamb wrote:
> Source: snakemake
> Version: 6.9.1+dfsg1-3
> Severity: wishlist
> Tags: patch
> User: reproducible-builds at lists.alioth.debian.org
> Usertags: randomness
> X-Debbugs-Cc: reproducible-bugs at lists.alioth.debian.org
> 
> Hi,
> 
> Whilst working on the Reproducible Builds effort [0] we noticed that
> snakemake could not be built reproducibly.
> 
> This is because it generates and ships a Graphviz .dot file during the
> tests and this file has a non-deterministic ordering. Also, the PDF
> file generated from this very .dot file contains a created date in its
> headers.
> 
> Patch attached that fixes the non-determinism in the .dot file
> generation and prevents the Debian packaging from shipping the
> non-deterministic PDF version.

Thanks, I will upload with this patch in the next couple of days (by sunday night)

Nilesh

-------------- next part --------------
A non-text attachment was scrubbed...
Name: OpenPGP_signature
Type: application/pgp-signature
Size: 840 bytes
Desc: OpenPGP digital signature
URL: <http://alioth-lists.debian.net/pipermail/debian-med-packaging/attachments/20211022/8e474404/attachment.sig>


More information about the Debian-med-packaging mailing list