[Debian-med-packaging] Bug#997120: camitk: FTBFS: ld: cannot find CMakeFiles/application-config.dir/CommandLineOptions.ixx.o: No such file or directory

[Lucas Nussbaum]

Source: camitk
Version: 4.1.2-4
Severity: serious
Justification: FTBFS
Tags: bookworm sid ftbfs

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
> /usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -Wl,-z,relro -Wl,-z,now -Wl,--as-needed  -rdynamic CMakeFiles/application-config.dir/application-config_autogen/mocs_compilation.cpp.o CMakeFiles/application-config.dir/main.cpp.o CMakeFiles/application-config.dir/CommandLineOptions.cxx.o CMakeFiles/application-config.dir/CommandLineOptions.ixx.o -o ../../../bin/camitk-config   -L/<<PKGBUILDDIR>>/camitk-build/lib/camitk-4.1  -L/<<PKGBUILDDIR>>/camitk-build/lib  -L/<<PKGBUILDDIR>>/camitk-build/bin  -L/sbuild-nonexistent/.config/CamiTK/lib/camitk-4.1  -L/sbuild-nonexistent/.config/CamiTK/lib  -L/sbuild-nonexistent/.config/CamiTK/bin  -L/<<PKGBUILDDIR>>/camitk-build/lib/camitk-4.1/components  -L/<<PKGBUILDDIR>>/camitk-build/lib/camitk-4.1/actions  -L/sbuild-nonexistent/.config/CamiTK/lib/camitk-4.1/components  -L/sbuild-nonexistent/.config/CamiTK/lib/camitk-4.1/actions  /usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.2 /usr/lib/x86_64-linux-gnu/libQt5XmlPatterns.so.5.15.2 /usr/lib/x86_64-linux-gnu/libQt5Help.so.5.15.2 /usr/lib/x86_64-linux-gnu/libQt5UiTools.a /usr/lib/x86_64-linux-gnu/libQt5OpenGL.so.5.15.2 /usr/lib/x86_64-linux-gnu/libQt5OpenGLExtensions.a /usr/lib/x86_64-linux-gnu/libQt5Test.so.5.15.2 -lcamitkcore -lfreetype -lz -lexpat /usr/lib/x86_64-linux-gnu/libvtkDomainsChemistryOpenGL2-7.1.so.7.1p.1 -ljpeg -lpng -ltiff /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneric-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersHyperTree-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersParallelDIY2-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersParallelFlowPaths-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersParallelGeometry-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersParallelImaging-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersParallelMPI-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersParallelStatistics-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersPoints-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersProgrammable-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersPython-7.1.so.7.1p.1 -lpython3.9 /usr/lib/libvtkWrappingTools-7.1.a /usr/lib/x86_64-linux-gnu/libvtkFiltersReebGraph-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersSMP-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersSelection-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersTexture-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersVerdict-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkverdict-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkGUISupportQt-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkGUISupportQtSQL-7.1.so.7.1p.1 -lsqlite3 /usr/lib/x86_64-linux-gnu/libvtkIOAMR-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so -lsz -ldl -lm /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libvtkIOEnSight-7.1.so.7.1p.1 -lnetcdf_c++ -lnetcdf /usr/lib/x86_64-linux-gnu/libvtkIOExport-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingGL2PSOpenGL2-7.1.so.7.1p.1 -lgl2ps /usr/lib/x86_64-linux-gnu/libvtkIOFFMPEG-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOMovie-7.1.so.7.1p.1 -ltheoraenc -ltheoradec -logg /usr/lib/x86_64-linux-gnu/libvtkIOGDAL-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOGeoJSON-7.1.so.7.1p.1 -ljsoncpp /usr/lib/x86_64-linux-gnu/libvtkIOImport-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOInfovis-7.1.so.7.1p.1 -lxml2 /usr/lib/x86_64-linux-gnu/libvtkIOMINC-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOMPIImage-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOMPIParallel-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOParallel-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIONetCDF-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOMySQL-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOODBC-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOPLY-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOParallelExodus-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOParallelLSDyna-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOParallelNetCDF-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOParallelXML-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOPostgreSQL-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOTecplotTable-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOVPIC-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkVPIC-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOVideo-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOXdmf2-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkxdmf2-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkImagingMorphological-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkImagingStatistics-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkImagingStencil-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkInfovisBoostGraphAlgorithms-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkInteractionImage-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkLocalExample-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkParallelMPI4Py-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingContextOpenGL2-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingExternal-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeTypeFontConfig-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingImage-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingLOD-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingMatplotlib-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingParallel-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingParallelLIC-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingSceneGraph-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingVolumeAMR-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingVolumeOpenGL2-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkTestingGenericBridge-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkTestingIOSQL-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkTestingRendering-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkViewsContext2D-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkViewsGeovis-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkViewsInfovis-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkWrappingJava-7.1.so.7.1p.1 -lqtpropertybrowser -lxerces-c /usr/lib/x86_64-linux-gnu/libQt5Network.so.5.15.2 -lQt5Widgets -lQt5Gui -lQt5Core -lpthread -lGL /usr/lib/x86_64-linux-gnu/libvtkDomainsChemistry-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersFlowPaths-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.2 /usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.2 /usr/lib/x86_64-linux-gnu/libQt5Sql.so.5.15.2 /usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.2 /usr/lib/x86_64-linux-gnu/libvtkIOGeometry-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOExodus-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkexoIIc-7.1.so.7.1p.1 -lnetcdf_c++ -lnetcdf /usr/lib/x86_64-linux-gnu/libvtkIOLSDyna-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so -lsz -ldl -lm /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5_hl.so -lxml2 /usr/lib/x86_64-linux-gnu/libvtkWrappingPython39Core-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkPythonInterpreter-7.1.so.7.1p.1 -lpython3.9 /usr/lib/x86_64-linux-gnu/libvtkFiltersParallel-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkParallelMPI-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingLICOpenGL2-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersAMR-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkParallelCore-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOLegacy-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-7.1.so.7.1p.1 -lGLEW -lSM -lICE -lX11 -lXext -lXt /usr/lib/x86_64-linux-gnu/libvtkImagingMath-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOSQL-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkGeovisCore-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkproj4-7.1.so.7.1p.1 -lm /usr/lib/x86_64-linux-gnu/libvtkChartsCore-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersImaging-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkInfovisLayout-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkInfovisCore-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkViewsCore-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersHybrid-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkImagingGeneral-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersModeling-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersExtraction-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersStatistics-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkImagingFourier-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkalglib-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkImagingHybrid-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOImage-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkDICOMParser-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkmetaio-7.1.so.7.1p.1 -lz /usr/lib/x86_64-linux-gnu/libvtkRenderingAnnotation-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkImagingColor-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingVolume-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkImagingCore-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOXML-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOXMLParser-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkIOCore-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingLabel-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkCommonColor-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeometry-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkCommonComputationalGeometry-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtkCommonSystem-7.1.so.7.1p.1 -lfreetype /usr/lib/x86_64-linux-gnu/libvtkCommonCore-7.1.so.7.1p.1 /usr/lib/x86_64-linux-gnu/libvtksys-7.1.so.7.1p.1 -ldl 
> /usr/bin/ld: cannot find CMakeFiles/application-config.dir/CommandLineOptions.ixx.o: No such file or directory
> collect2: error: ld returned 1 exit status


The full build log is available from:
http://qa-logs.debian.net/2021/10/23/camitk_4.1.2-4_unstable.log

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

If you reassign this bug to another package, please marking it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.