[Debian-med-packaging] Bug#997488: Bug#997488: q2cli: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.9 returned exit code 13

Étienne Mollier emollier at emlwks999.eu
Sat Oct 23 23:43:03 BST 2021


Control: tags -1 + confirmed

Aloha,

From looking up ci.debian.net [1], this q2cli issue seems
related to a recent upgrade of python-click 8.0.2.

[1]: https://ci.debian.net/packages/q/q2cli/testing/amd64/

The multiple failures are probably all related to the following
issue, which can be simply triggered with the --version flag:

	$ qiime --version
	Traceback (most recent call last):
	  File "/usr/bin/qiime", line 33, in <module>
	    sys.exit(load_entry_point('q2cli==2021.8.0', 'console_scripts', 'qiime')())
	  File "/usr/lib/python3/dist-packages/click/core.py", line 1126, in __call__
	    return self.main(*args, **kwargs)
	  File "/usr/lib/python3/dist-packages/click/core.py", line 1050, in main
	    with self.make_context(prog_name, args, **extra) as ctx:
	  File "/usr/lib/python3/dist-packages/click/core.py", line 912, in make_context
	    self.parse_args(ctx, args)
	  File "/usr/lib/python3/dist-packages/q2cli/click/command.py", line 43, in parse_args
	    return super().parse_args(ctx, args)
	  File "/usr/lib/python3/dist-packages/click/core.py", line 1613, in parse_args
	    rest = super().parse_args(ctx, args)
	  File "/usr/lib/python3/dist-packages/click/core.py", line 1364, in parse_args
	    parser = self.make_parser(ctx)
	  File "/usr/lib/python3/dist-packages/q2cli/click/command.py", line 33, in make_parser
	    param.add_to_parser(parser, ctx)
	  File "/usr/lib/python3/dist-packages/click/core.py", line 2639, in add_to_parser
	    parser.add_option(
	  File "/usr/lib/python3/dist-packages/q2cli/click/parser.py", line 126, in add_option
	    option = Q2Option(opts, dest, action=action, nargs=nargs,
	TypeError: __init__() got multiple values for argument 'obj'

Have a good night,  :)
-- 
Étienne Mollier <emollier at emlwks999.eu>
Fingerprint:  8f91 b227 c7d6 f2b1 948c  8236 793c f67e 8f0d 11da
Sent from my alarm clock
-------------- next part --------------
A non-text attachment was scrubbed...
Name: signature.asc
Type: application/pgp-signature
Size: 833 bytes
Desc: not available
URL: <http://alioth-lists.debian.net/pipermail/debian-med-packaging/attachments/20211024/02a4cecf/attachment-0001.sig>


More information about the Debian-med-packaging mailing list