[Debian-med-packaging] Bug#1027415: ITP: python-bioframe -- library to enable flexible, scalable operations on genomic interval dataframes

Nilesh Patra nilesh at debian.org
Sat Dec 31 05:57:58 GMT 2022


Package: wnpp
Severity: wishlist
X-Debbugs-Cc: nilesh at debian.org

Subject: ITP: python-bioframe -- library to enable flexible, scalable operations on genomic interval dataframes
Package: wnpp
Owner: Nilesh Patra <nilesh at debian.org>
Severity: wishlist

* Package name    : python-bioframe
  Version         : 0.3.3
  Upstream Author : Open2C
* URL             : https://github.com/open2c/bioframe
* License         : Expat
  Programming Lang: Python
  Description     : library to enable flexible, scalable operations on genomic interval dataframes
 Building bioframe directly on top of pandas enables immediate access
 to a rich set of dataframe operations. Working in python enables
 rapid visualization (e.g. matplotlib, seaborn) and iteration of
 genomic analyses.
 .
 Bioframe implements a variety of genomic interval operations directly on
 dataframes. Bioframe also includes functions for loading diverse genomic
 data formats, and performing operations on special classes of genomic
 intervals, including chromosome arms and fixed size bins.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/python-bioframe



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