[Debian-med-packaging] Bug#1006180: ITP: twopaco -- build the compacted de Bruijn graph from many complete genomes

Andreas Tille tille at debian.org
Sun Feb 20 17:40:22 GMT 2022


Package: wnpp
Severity: wishlist

Subject: ITP: twopaco -- build the compacted de Bruijn graph from many complete genomes
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist

* Package name    : twopaco
  Version         : 0.9.4
  Upstream Author : I. Minkin and P. Medvedev.
* URL             : https://github.com/medvedevgroup/TwoPaCo
* License         : BSD-4-clause
  Programming Lang: C
  Description     : build the compacted de Bruijn graph from many complete genomes
 TwoPaCo is an implementation of the algorithm described in the paper
 "TwoPaCo: An efficient algorithm to build the compacted de Bruijn graph
 from many complete genomes".
 .
 This package contains two programs:
 .
  twopaco: tool for direct construction of the compressed graph from
           multiple complete genomes
  graphdump: utility that turns output of twopaco into a text format

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/twopaco



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