[Debian-med-packaging] Bug#1004455: python3-mappy: undefined symbol ksw_extz2_sse on several architectures

[Adrian Bunk]

Package: python3-mappy
Version: 2.22+dfsg-3
Severity: serious
Control: block 1001716 by -1
Control: affects -1 src:nanolyse

https://tracker.debian.org/pkg/minimap2

Migration status for minimap2 (2.17+dfsg-12 to 2.22+dfsg-3): BLOCKED: Rejected/violates migration policy/introduces a regression
Issues preventing migration:
∙ ∙ autopkgtest for nanolyse/1.2.0-2: amd64: Pass, arm64: Pass, armhf: Regression ♻ (reference ♻), i386: Regression ♻ (reference ♻), ppc64el: Regression ♻ (reference ♻)


This is due to:

(sid_armhf-dchroot)bunk at amdahl:~$ python3
Python 3.9.10 (main, Jan 16 2022, 17:12:18)
[GCC 11.2.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import mappy
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
ImportError: /usr/lib/python3/dist-packages/mappy.cpython-39-arm-linux-gnueabihf.so: undefined symbol: ksw_extz2_sse
>>>