[Debian-med-packaging] Bug#1016160: ITP: unifrac-tools -- high-performance phylogenetic diversity calculations (binaries)

Andreas Tille tille at debian.org
Thu Jul 28 09:43:44 BST 2022


Package: wnpp
Severity: wishlist

Subject: ITP: unifrac-tools -- high-performance phylogenetic diversity calculations (binaries)
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist

* Package name    : unifrac-tools
  Version         : 1.1.1
  Upstream Author : UniFrac development team.
* URL             : https://github.com/biocore/unifrac-tools
* License         : BSD-3-Clause
  Programming Lang: C
  Description     : high-performance phylogenetic diversity calculations (binaries)
 The de facto repository for high-performance phylogenetic diversity
 calculations. The methods in this repository are based on an
 implementation of the Strided State UniFrac algorithm which is faster,
 and uses less memory than Fast UniFrac. Strided State UniFrac supports
 Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance
 Adjusted UniFrac and meta UniFrac. This repository also includes Stacked
 Faith (manuscript in preparation), a method for calculating Faith's PD
 that is faster and uses less memory than the Fast UniFrac-based
 reference implementation.
 .
 This package contains target binaries ssu and faithpd

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/unifrac-tools



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