[Debian-med-packaging] Bug#1016346: pycorrfit: FTBFS: make[1]: *** [debian/rules:46: override_dh_auto_build] Error 1

Lucas Nussbaum lucas at debian.org
Fri Jul 29 19:41:23 BST 2022


Source: pycorrfit
Version: 1.1.7+dfsg-1
Severity: serious
Justification: FTBFS
Tags: bookworm sid ftbfs
User: lucas at debian.org
Usertags: ftbfs-20220728 ftbfs-bookworm

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> cd doc && \
> faketime -f "2019-12-04 13:19:32+00:00" pdflatex -synctex=1 -interaction=nonstopmode PyCorrFit_doc.tex && \
> bibtex PyCorrFit_doc.aux && \
> faketime -f "2019-12-04 13:19:32+00:00" pdflatex -synctex=1 -interaction=nonstopmode PyCorrFit_doc.tex && \
> faketime -f "2019-12-04 13:19:32+00:00" pdflatex -synctex=1 -interaction=nonstopmode PyCorrFit_doc.tex
> This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex)
>  restricted \write18 enabled.
> entering extended mode
> (./PyCorrFit_doc.tex
> LaTeX2e <2022-06-01> patch level 5
> L3 programming layer <2022-07-15>
> (/usr/share/texlive/texmf-dist/tex/latex/koma-script/scrartcl.cls
> Document Class: scrartcl 2022/07/04 v3.37 KOMA-Script document class (article)
> (/usr/share/texlive/texmf-dist/tex/latex/koma-script/scrkbase.sty
> (/usr/share/texlive/texmf-dist/tex/latex/koma-script/scrbase.sty
> (/usr/share/texlive/texmf-dist/tex/latex/koma-script/scrlfile.sty
> (/usr/share/texlive/texmf-dist/tex/latex/koma-script/scrlfile-hook.sty
> (/usr/share/texlive/texmf-dist/tex/latex/koma-script/scrlogo.sty)))
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)))
> (/usr/share/texlive/texmf-dist/tex/latex/koma-script/tocbasic.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/koma-script/scrsize12pt.clo)
> (/usr/share/texlive/texmf-dist/tex/latex/koma-script/typearea.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty
> (/usr/share/texlive/texmf-dist/tex/latex/ucs/utf8x.def))
> (/usr/share/texlive/texmf-dist/tex/latex/ucs/ucs.sty
> (/usr/share/texlive/texmf-dist/tex/latex/ucs/data/uni-global.def))
> (/usr/share/texlive/texmf-dist/tex/generic/babel/babel.sty
> (/usr/share/texlive/texmf-dist/tex/generic/babel/txtbabel.def)
> (/usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf))
> (/usr/share/texlive/texmf-dist/tex/generic/babel/locale/en/babel-english.tex)
> (/usr/share/texlive/texmf-dist/tex/latex/siunitx/siunitx.sty
> (/usr/share/texlive/texmf-dist/tex/latex/translations/translations.sty
> (/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty
> (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)))
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
> For additional information on amsmath, use the `?' option.
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/cite/cite.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/subfig/subfig.sty
> (/usr/share/texlive/texmf-dist/tex/latex/caption/caption.sty
> (/usr/share/texlive/texmf-dist/tex/latex/caption/caption3.sty
> (/usr/share/texlive/texmf-dist/tex/latex/caption/caption-koma.sto))))
> (/usr/share/texlive/texmf-dist/tex/latex/tools/tabularx.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/wrapfig/wrapfig.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)
> (/usr/share/texlive/texmf-dist/tex/latex/xcolor/svgnam.def))
> (/usr/share/texlive/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)))
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
> (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
> (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty
> (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)))
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
> (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def)
> 
> Package hyperref Warning: Unexpected value for option `pdftex'
> (hyperref)                is ignored on input line 4045.
> 
> (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
> (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
> (/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
> (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
> (/usr/share/texlive/texmf-dist/tex/latex/was/upgreek.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/doi/doi.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def)
> No file PyCorrFit_doc.aux.
> (/usr/share/texlive/texmf-dist/tex/latex/ucs/ucsencs.def)
> (/usr/share/texlive/texmf-dist/tex/latex/translations/translations-basic-dictio
> nary-english.trsl)
> *geometry* driver: auto-detecting
> *geometry* detected driver: pdftex
> (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
> [Loading MPS to PDF converter (version 2006.09.02).]
> ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
> (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
> (/usr/share/texlive/texmf-dist/tex/latex/bookmark/bookmark.sty
> (/usr/share/texlive/texmf-dist/tex/latex/bookmark/bkm-pdftex.def))
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)
> (/usr/share/texlive/texmf-dist/tex/latex/ucs/data/uni-0.def)
> No file PyCorrFit_doc.toc.
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> ! Argument of ? has an extra }.
> <inserted text> 
>                 \par 
> l.144 \newpage
>               
> Runaway argument?
> ! Paragraph ended before ? was complete.
> <to be read again> 
>                    \par 
> l.144 \newpage
>               
> (That makes 100 errors; please try again.)
> !  ==> Fatal error occurred, no output PDF file produced!
> Transcript written on PyCorrFit_doc.log.
> make[1]: *** [debian/rules:46: override_dh_auto_build] Error 1


The full build log is available from:
http://qa-logs.debian.net/2022/07/28/pycorrfit_1.1.7+dfsg-1_unstable.log

All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20220728;users=lucas@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20220728&fusertaguser=lucas@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

If you reassign this bug to another package, please marking it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.



More information about the Debian-med-packaging mailing list