[Debian-med-packaging] Bug#1013064: vmatch: ftbfs with GCC-12
Matthias Klose
doko at debian.org
Thu Jun 16 13:14:56 BST 2022
Package: src:vmatch
Version: 2.3.1+dfsg-7
Severity: normal
Tags: sid bookworm
User: debian-gcc at lists.debian.org
Usertags: ftbfs-gcc-12
[This bug is targeted to the upcoming bookworm release]
Please keep this issue open in the bug tracker for the package it
was filed for. If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.
The package fails to build in a test rebuild on at least amd64 with
gcc-12/g++-12, but succeeds to build with gcc-11/g++-11. The
severity of this report will be raised before the bookworm release.
The full build log can be found at:
http://qa-logs.debian.net/2022/06/09/gcc12/vmatch_2.3.1+dfsg-7_unstable_gcc12.log
The last lines of the build log are at the end of this report.
To build with GCC 11, either set CC=gcc-11 CXX=g++-11 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.
apt-get -t=experimental install g++
Common build failures are new warnings resulting in build failures with
-Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-11/porting_to.html
GCC 11 defaults to the GNU++17 standard. If your package installs
header files in /usr/include, please don't work around C++17 issues
by choosing a lower C++ standard for the package build, but fix these
issues to build with the C++17 standard.
[...]
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/kurtz-basic'
vmrelease.sh VMATCH -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 > ../include/vmrelease.h
mkdir -p ../lib/libfiles/kurtz-basic/
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c accvirt.c -o ../lib/libfiles/kurtz-basic/accvirt.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c alphabet.c -o ../lib/libfiles/kurtz-basic/alphabet.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c binsplitvn.c -o ../lib/libfiles/kurtz-basic/binsplitvn.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c bytehandler.c -o ../lib/libfiles/kurtz-basic/bytehandler.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c chain2count.c -o ../lib/libfiles/kurtz-basic/chain2count.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c chain2dim.c -o ../lib/libfiles/kurtz-basic/chain2dim.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c checkgzip.c -o ../lib/libfiles/kurtz-basic/checkgzip.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c checkonoff.c -o ../lib/libfiles/kurtz-basic/checkonoff.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c clock.c -o ../lib/libfiles/kurtz-basic/clock.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c cmpalpha.c -o ../lib/libfiles/kurtz-basic/cmpalpha.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c comparetabs.c -o ../lib/libfiles/kurtz-basic/comparetabs.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c compfilenm.c -o ../lib/libfiles/kurtz-basic/compfilenm.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c debug.c -o ../lib/libfiles/kurtz-basic/debug.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c detnumofcodes.c -o ../lib/libfiles/kurtz-basic/detnumofcodes.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c dictmaxsize.c -o ../lib/libfiles/kurtz-basic/dictmaxsize.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c distri.c -o ../lib/libfiles/kurtz-basic/distri.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c dstrdup.c -o ../lib/libfiles/kurtz-basic/dstrdup.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c encodedseq.c -o ../lib/libfiles/kurtz-basic/encodedseq.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c encseq2offset.c -o ../lib/libfiles/kurtz-basic/encseq2offset.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c endianess.c -o ../lib/libfiles/kurtz-basic/endianess.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c fastastream.c -o ../lib/libfiles/kurtz-basic/fastastream.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c filehandle.c -o ../lib/libfiles/kurtz-basic/filehandle.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c genericstream.c -o ../lib/libfiles/kurtz-basic/genericstream.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c genfile.c -o ../lib/libfiles/kurtz-basic/genfile.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c getbasename.c -o ../lib/libfiles/kurtz-basic/getbasename.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c getEqs.c -o ../lib/libfiles/kurtz-basic/getEqs.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c guessprot.c -o ../lib/libfiles/kurtz-basic/guessprot.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c handleesastream.c -o ../lib/libfiles/kurtz-basic/handleesastream.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c kmer2string.c -o ../lib/libfiles/kurtz-basic/kmer2string.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c mapfile.c -o ../lib/libfiles/kurtz-basic/mapfile.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c mergeesa.c -o ../lib/libfiles/kurtz-basic/mergeesa.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c mkidxfilecpy.c -o ../lib/libfiles/kurtz-basic/mkidxfilecpy.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c multiseq-adv.c -o ../lib/libfiles/kurtz-basic/multiseq-adv.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c multiseq.c -o ../lib/libfiles/kurtz-basic/multiseq.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c parsemultiform.c -o ../lib/libfiles/kurtz-basic/parsemultiform.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c procopt.c -o ../lib/libfiles/kurtz-basic/procopt.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c readgzip.c -o ../lib/libfiles/kurtz-basic/readgzip.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c readmulti.c -o ../lib/libfiles/kurtz-basic/readmulti.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c readnextline.c -o ../lib/libfiles/kurtz-basic/readnextline.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c readvirt.c -o ../lib/libfiles/kurtz-basic/readvirt.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c redblack.c -o ../lib/libfiles/kurtz-basic/redblack.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c safescpy.c -o ../lib/libfiles/kurtz-basic/safescpy.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c scanpaths.c -o ../lib/libfiles/kurtz-basic/scanpaths.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c scorematrix.c -o ../lib/libfiles/kurtz-basic/scorematrix.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c seterror.c -o ../lib/libfiles/kurtz-basic/seterror.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c showmemsize.c -o ../lib/libfiles/kurtz-basic/showmemsize.o
cc -DWITHSYSCONF -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -Wstrict-prototypes -O3 -Wundef -Wshadow -Wstrict-prototypes -Wcast-align -Wsign-compare -Wnested-externs -Wall -Wcast-qual -Wpointer-arith -Winline -Werror -Wno-unused-but-set-variable -Wno-cast-qual -Wno-error=maybe-uninitialized -fno-stack-protector -D_GNU_SOURCE -Wno-error=format-overflow -Wdate-time -D_FORTIFY_SOURCE=2 -I../include -DNOLICENSEMANAGER -Wdate-time -D_FORTIFY_SOURCE=2 -c space.c -o ../lib/libfiles/kurtz-basic/space.o
In function ‘findthespaceblock’,
inlined from ‘reusespaceblock’ at space.c:279:19,
inlined from ‘allocandusespaceviaptr’ at space.c:397:19:
space.c:222:22: error: pointer ‘ptr’ may be used after ‘realloc’ [-Werror=use-after-free]
222 | findblock.keyvalue = ptr;
| ~~~~~~~~~~~~~~~~~~~^~~~~
In function ‘reusespaceblock’,
inlined from ‘allocandusespaceviaptr’ at space.c:397:19:
space.c:272:12: note: call to ‘realloc’ here
272 | tmpptr = realloc(ptr,(size_t) (size*number));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cc1: all warnings being treated as errors
make[3]: *** [Filegoals.mf:5: ../lib/libfiles/kurtz-basic/space.o] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/kurtz-basic'
make[2]: *** [Makefile:49: all] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: *** [debian/rules:18: override_dh_auto_build] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:10: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
More information about the Debian-med-packaging
mailing list