[Debian-med-packaging] Bug#1010568: busco: missing dependencies on hmmer and prodigal

[Andreas Tille]

Control: tags -1 pending

Hi Andrius,

Am Wed, May 04, 2022 at 05:59:01PM +0300 schrieb Andrius Merkys:
> I have installed busco and attempted calculating coverage of a genome of
> interest:
> 
> $ busco -i GCA_000742995.1_ASM74299v1_genomic.fna -l
> xanthomonadales_odb10 -o xanthomonadales -m genome
> 
> busco first crashed due to missing hmmsearch executable, then, after
> installing hmmer, due to missing prodigal executable. I propose adding
> hmmer and prodigal as dependencies of busco.

Adding these is easy.  Would you mind adding either this fna file (or
some similar example) to the test suite enabling us to test that package
properly in autopkgtest?

(And feel free to do a team upload if you are in that mood.)

Kind regards

    Andreas.

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