[Debian-med-packaging] Bug#1043647: bali-phy: Fails to build source after successful build

Sun Aug 13 14:17:55 BST 2023

Source: bali-phy
Version: 3.6.1+dfsg-1
Severity: minor
Tags: trixie sid ftbfs
User: lucas at debian.org
Usertags: ftbfs-sab-20230813 ftbfs-source-after-build
User: debian-qa at lists.debian.org
Usertags: qa-doublebuild

Hi,

This package fails to build a source package after a successful build
(dpkg-buildpackage ; dpkg-buildpackage -S).

This is probably a clear violation of Debian Policy section 4.9 (clean target),
but this is filed as severity:minor for now, because a discussion on
debian-devel showed that we might want to revisit the requirement of a working
'clean' target.

More information about this class of issues, included common problems and
solutions, is available at
https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild

Relevant part of the build log:
> cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S
> ----------------------------------------------------------------------------------------------------------------------------
> 
> dpkg-buildpackage: info: source package bali-phy
> dpkg-buildpackage: info: source version 3.6.1+dfsg-1
> dpkg-buildpackage: info: source distribution unstable
> dpkg-buildpackage: info: source changed by Andreas Tille <tille at debian.org>
>  dpkg-source --before-build .
>  debian/rules clean
> dh clean --buildsystem=meson
>    dh_auto_clean -O--buildsystem=meson
>    dh_autoreconf_clean -O--buildsystem=meson
>    dh_clean -O--buildsystem=meson
>  dpkg-source -b .
> dpkg-source: info: using source format '3.0 (quilt)'
> dpkg-source: info: building bali-phy using existing ./bali-phy_3.6.1+dfsg.orig.tar.xz
> dpkg-source: warning: newly created empty file 'tests/IO/errors/Codons/1/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/IO/errors/Codons/2/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/IO/errors/Codons/3/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/IO/errors/Codons/AUTGC/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/IO/errors/Codons/stop/1/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/IO/errors/Codons/stop/2/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/IO/errors/DNA-RNA/1/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/IO/errors/DNA-RNA/2/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/IO/errors/DNA-RNA/3/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/IO/errors/Triplets/1/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/IO/errors/Triplets/2/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/IO/errors/Triplets/AUTGC/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/haskell/Data/Map/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/haskell/IO/1/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/haskell/IO/3/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/haskell/Ord/1/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/haskell/Ord/2/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/haskell/Ord/3/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/haskell/parse/1/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/mcmc/fixed-scale/ignore-output-1/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/mcmc/no-imodel/ignore-output-1/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/mcmc/one-sequence/1/ignore-output-1/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/mcmc/two-sequences/1/ignore-output-1/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/mcmc/with-imodel/ignore-output-1/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/optimizer/1/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/10/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/11/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/12/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/13/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/14/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/15/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/16/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/2/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/3/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/4/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/5/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/6/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/7/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/8/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/9/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/eta-reduction/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/optimizer/pat-bind/obtained-output' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/10/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/10/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/11/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/11/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/12/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/12/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/13/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/13/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/14/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/14/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/16/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/16/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/17/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/17/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/18/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/18/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/19/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/19/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/21/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/21/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/22/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/22/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/23/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/23/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/24/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/24/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/25/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/25/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/26/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/26/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/3/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/3/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/4/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/4/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/5/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/5/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/6/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/6/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/7/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/7/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/8/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/8/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/9/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/9/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/M3/1/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/M3/1/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/M3/2/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/M3/2/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/constraints/1/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/error/1/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/parse/error/2/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/parse/error/3/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/parse/error/4/obtained-output' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/functions/1/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/functions/1/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Codons/dna/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/guess-alphabet/Codons/dna/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Codons/rna/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/guess-alphabet/Codons/rna/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Triplets/dna/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/guess-alphabet/Triplets/dna/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Triplets/rna/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/guess-alphabet/Triplets/rna/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/aa/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/guess-alphabet/aa/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/dna/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/guess-alphabet/dna/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/rna/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/guess-alphabet/rna/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/int-to-double/1/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/int-to-double/1/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/int-to-double/2/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/int-to-double/2/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/int-to-double/3/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/int-to-double/3/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/let/1/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/let/1/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/partitions/1/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/partitions/1/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/parse/partitions/2/obtained-output' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/partitions/3/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/partitions/4/obtained-output' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/partitions/link/1/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/partitions/link/1/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/parse/partitions/link/2/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/parse/partitions/link/3/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/parse/partitions/link/4/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/parse/partitions/link/5/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/parse/partitions/link/6/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/parse/partitions/link/7/obtained-output' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/parse/partitions/link/8/obtained-output' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/partitions/link/9/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/x3/1/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/x3/1/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/x3/2/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/x3/2/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/x3/3/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/x3/3/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/x3/4/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/x3/4/obtained-error' will not be represented in diff
> dpkg-source: warning: file bali-phy-3.6.1+dfsg/tests/parse/x3/5/BAliPhy.Main.hs has no final newline (either original or modified version)
> dpkg-source: warning: newly created empty file 'tests/parse/x3/5/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/print/1/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/print/2/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/demos/1/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/demos/2/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/demos/3/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/demos/4/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/demos/5/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/demos/6/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/demos/airline/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/demos/coalmine/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/infer_tree/1/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/lazy_sample/1/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/lazy_sample/2/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/lazy_sample/3/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/observe/1/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/popgen/li_stephens/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/sample_tree/2/obtained-error' will not be represented in diff
> dpkg-source: warning: newly created empty file 'tests/prob_prog/sample_tree/3/obtained-error' will not be represented in diff
> dpkg-source: info: local changes detected, the modified files are:
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Codons/1/obtained-error
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Codons/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Codons/2/obtained-error
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Codons/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Codons/3/obtained-error
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Codons/3/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Codons/AUTGC/obtained-error
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Codons/AUTGC/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Codons/stop/1/obtained-error
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Codons/stop/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Codons/stop/2/obtained-error
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Codons/stop/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/IO/errors/DNA-RNA/1/obtained-error
>  bali-phy-3.6.1+dfsg/tests/IO/errors/DNA-RNA/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/IO/errors/DNA-RNA/2/obtained-error
>  bali-phy-3.6.1+dfsg/tests/IO/errors/DNA-RNA/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/IO/errors/DNA-RNA/3/obtained-error
>  bali-phy-3.6.1+dfsg/tests/IO/errors/DNA-RNA/3/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Triplets/1/obtained-error
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Triplets/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Triplets/2/obtained-error
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Triplets/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Triplets/AUTGC/obtained-error
>  bali-phy-3.6.1+dfsg/tests/IO/errors/Triplets/AUTGC/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/haskell/Data/Map/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/haskell/Data/Map/obtained-output
>  bali-phy-3.6.1+dfsg/tests/haskell/IO/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/haskell/IO/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/haskell/IO/3/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/haskell/IO/3/obtained-output
>  bali-phy-3.6.1+dfsg/tests/haskell/Ord/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/haskell/Ord/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/haskell/Ord/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/haskell/Ord/2/obtained-output
>  bali-phy-3.6.1+dfsg/tests/haskell/Ord/3/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/haskell/Ord/3/obtained-output
>  bali-phy-3.6.1+dfsg/tests/haskell/parse/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/haskell/parse/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/mcmc/fixed-scale/ignore-output-1/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/mcmc/fixed-scale/ignore-output-1/C1.MAP
>  bali-phy-3.6.1+dfsg/tests/mcmc/fixed-scale/ignore-output-1/C1.P1.fastas
>  bali-phy-3.6.1+dfsg/tests/mcmc/fixed-scale/ignore-output-1/C1.P1.initial.fasta
>  bali-phy-3.6.1+dfsg/tests/mcmc/fixed-scale/ignore-output-1/C1.err
>  bali-phy-3.6.1+dfsg/tests/mcmc/fixed-scale/ignore-output-1/C1.log
>  bali-phy-3.6.1+dfsg/tests/mcmc/fixed-scale/ignore-output-1/C1.out
>  bali-phy-3.6.1+dfsg/tests/mcmc/fixed-scale/ignore-output-1/C1.run.json
>  bali-phy-3.6.1+dfsg/tests/mcmc/fixed-scale/ignore-output-1/C1.trees
>  bali-phy-3.6.1+dfsg/tests/mcmc/fixed-scale/obtained-error
>  bali-phy-3.6.1+dfsg/tests/mcmc/fixed-scale/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/mcmc/fixed-scale/obtained-output
>  bali-phy-3.6.1+dfsg/tests/mcmc/no-imodel/ignore-output-1/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/mcmc/no-imodel/ignore-output-1/C1.MAP
>  bali-phy-3.6.1+dfsg/tests/mcmc/no-imodel/ignore-output-1/C1.P1.initial.fasta
>  bali-phy-3.6.1+dfsg/tests/mcmc/no-imodel/ignore-output-1/C1.err
>  bali-phy-3.6.1+dfsg/tests/mcmc/no-imodel/ignore-output-1/C1.log
>  bali-phy-3.6.1+dfsg/tests/mcmc/no-imodel/ignore-output-1/C1.out
>  bali-phy-3.6.1+dfsg/tests/mcmc/no-imodel/ignore-output-1/C1.run.json
>  bali-phy-3.6.1+dfsg/tests/mcmc/no-imodel/ignore-output-1/C1.trees
>  bali-phy-3.6.1+dfsg/tests/mcmc/no-imodel/obtained-error
>  bali-phy-3.6.1+dfsg/tests/mcmc/no-imodel/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/mcmc/no-imodel/obtained-output
>  bali-phy-3.6.1+dfsg/tests/mcmc/one-sequence/1/ignore-output-1/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/mcmc/one-sequence/1/ignore-output-1/C1.MAP
>  bali-phy-3.6.1+dfsg/tests/mcmc/one-sequence/1/ignore-output-1/C1.P1.initial.fasta
>  bali-phy-3.6.1+dfsg/tests/mcmc/one-sequence/1/ignore-output-1/C1.err
>  bali-phy-3.6.1+dfsg/tests/mcmc/one-sequence/1/ignore-output-1/C1.log
>  bali-phy-3.6.1+dfsg/tests/mcmc/one-sequence/1/ignore-output-1/C1.out
>  bali-phy-3.6.1+dfsg/tests/mcmc/one-sequence/1/ignore-output-1/C1.run.json
>  bali-phy-3.6.1+dfsg/tests/mcmc/one-sequence/1/obtained-error
>  bali-phy-3.6.1+dfsg/tests/mcmc/one-sequence/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/mcmc/one-sequence/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/mcmc/two-sequences/1/ignore-output-1/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/mcmc/two-sequences/1/ignore-output-1/C1.MAP
>  bali-phy-3.6.1+dfsg/tests/mcmc/two-sequences/1/ignore-output-1/C1.P1.fastas
>  bali-phy-3.6.1+dfsg/tests/mcmc/two-sequences/1/ignore-output-1/C1.P1.initial.fasta
>  bali-phy-3.6.1+dfsg/tests/mcmc/two-sequences/1/ignore-output-1/C1.err
>  bali-phy-3.6.1+dfsg/tests/mcmc/two-sequences/1/ignore-output-1/C1.log
>  bali-phy-3.6.1+dfsg/tests/mcmc/two-sequences/1/ignore-output-1/C1.out
>  bali-phy-3.6.1+dfsg/tests/mcmc/two-sequences/1/ignore-output-1/C1.run.json
>  bali-phy-3.6.1+dfsg/tests/mcmc/two-sequences/1/ignore-output-1/C1.trees
>  bali-phy-3.6.1+dfsg/tests/mcmc/two-sequences/1/obtained-error
>  bali-phy-3.6.1+dfsg/tests/mcmc/two-sequences/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/mcmc/two-sequences/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/mcmc/with-imodel/ignore-output-1/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/mcmc/with-imodel/ignore-output-1/C1.MAP
>  bali-phy-3.6.1+dfsg/tests/mcmc/with-imodel/ignore-output-1/C1.P1.fastas
>  bali-phy-3.6.1+dfsg/tests/mcmc/with-imodel/ignore-output-1/C1.P1.initial.fasta
>  bali-phy-3.6.1+dfsg/tests/mcmc/with-imodel/ignore-output-1/C1.err
>  bali-phy-3.6.1+dfsg/tests/mcmc/with-imodel/ignore-output-1/C1.log
>  bali-phy-3.6.1+dfsg/tests/mcmc/with-imodel/ignore-output-1/C1.out
>  bali-phy-3.6.1+dfsg/tests/mcmc/with-imodel/ignore-output-1/C1.run.json
>  bali-phy-3.6.1+dfsg/tests/mcmc/with-imodel/ignore-output-1/C1.trees
>  bali-phy-3.6.1+dfsg/tests/mcmc/with-imodel/obtained-error
>  bali-phy-3.6.1+dfsg/tests/mcmc/with-imodel/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/mcmc/with-imodel/obtained-output
>  bali-phy-3.6.1+dfsg/tests/optimizer/1/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/10/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/10/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/11/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/11/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/12/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/12/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/13/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/13/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/14/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/14/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/15/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/15/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/16/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/16/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/2/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/3/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/3/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/4/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/4/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/5/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/5/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/6/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/6/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/7/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/7/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/8/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/8/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/9/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/9/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/eta-reduction/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/eta-reduction/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/optimizer/pat-bind/obtained-error
>  bali-phy-3.6.1+dfsg/tests/optimizer/pat-bind/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/10/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/10/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/10/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/11/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/11/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/11/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/12/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/12/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/12/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/13/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/13/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/13/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/14/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/14/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/14/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/16/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/16/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/16/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/17/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/17/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/17/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/18/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/18/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/18/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/19/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/19/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/19/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/21/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/21/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/21/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/22/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/22/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/22/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/23/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/23/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/23/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/24/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/24/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/24/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/25/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/25/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/25/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/26/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/26/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/26/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/3/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/3/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/3/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/4/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/4/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/4/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/5/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/5/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/5/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/6/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/6/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/6/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/7/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/7/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/7/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/8/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/8/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/8/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/9/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/9/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/9/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/M3/1/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/M3/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/M3/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/M3/2/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/M3/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/M3/2/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/constraints/1/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/constraints/1/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/constraints/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/constraints/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/error/1/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/error/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/error/2/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/error/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/error/3/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/error/3/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/error/4/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/error/4/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/functions/1/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/functions/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/functions/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Codons/dna/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Codons/dna/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Codons/dna/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Codons/rna/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Codons/rna/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Codons/rna/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Triplets/dna/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Triplets/dna/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Triplets/dna/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Triplets/rna/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Triplets/rna/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/Triplets/rna/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/aa/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/aa/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/aa/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/dna/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/dna/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/dna/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/rna/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/rna/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/guess-alphabet/rna/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/int-to-double/1/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/int-to-double/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/int-to-double/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/int-to-double/2/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/int-to-double/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/int-to-double/2/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/int-to-double/3/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/int-to-double/3/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/int-to-double/3/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/let/1/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/let/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/let/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/1/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/2/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/3/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/3/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/3/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/3/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/4/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/4/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/1/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/2/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/3/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/3/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/4/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/4/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/5/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/5/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/6/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/6/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/7/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/7/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/8/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/8/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/9/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/9/obtained-error
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/9/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/partitions/link/9/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/x3/1/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/x3/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/x3/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/x3/2/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/x3/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/x3/2/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/x3/3/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/x3/3/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/x3/3/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/x3/4/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/x3/4/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/x3/4/obtained-output
>  bali-phy-3.6.1+dfsg/tests/parse/x3/5/BAliPhy.Main.hs
>  bali-phy-3.6.1+dfsg/tests/parse/x3/5/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/parse/x3/5/obtained-output
>  bali-phy-3.6.1+dfsg/tests/print/1/Print.Main.hs
>  bali-phy-3.6.1+dfsg/tests/print/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/print/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/print/2/Print.Main.hs
>  bali-phy-3.6.1+dfsg/tests/print/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/print/2/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/categorical/ignore-output-1/C1.err
>  bali-phy-3.6.1+dfsg/tests/prob_prog/categorical/ignore-output-1/C1.log.json
>  bali-phy-3.6.1+dfsg/tests/prob_prog/categorical/ignore-output-1/C1.out
>  bali-phy-3.6.1+dfsg/tests/prob_prog/categorical/ignore-output-1/C1.run.json
>  bali-phy-3.6.1+dfsg/tests/prob_prog/categorical/obtained-error
>  bali-phy-3.6.1+dfsg/tests/prob_prog/categorical/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/categorical/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/2/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/3/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/3/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/4/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/4/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/5/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/5/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/6/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/6/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/airline/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/airline/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/coalmine/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/demos/coalmine/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/functions/1/ignore-output-1/C1.err
>  bali-phy-3.6.1+dfsg/tests/prob_prog/functions/1/ignore-output-1/C1.log.json
>  bali-phy-3.6.1+dfsg/tests/prob_prog/functions/1/ignore-output-1/C1.out
>  bali-phy-3.6.1+dfsg/tests/prob_prog/functions/1/ignore-output-1/C1.run.json
>  bali-phy-3.6.1+dfsg/tests/prob_prog/functions/1/obtained-error
>  bali-phy-3.6.1+dfsg/tests/prob_prog/functions/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/functions/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/if-then-else/1/ignore-output-1/C1.err
>  bali-phy-3.6.1+dfsg/tests/prob_prog/if-then-else/1/ignore-output-1/C1.log.json
>  bali-phy-3.6.1+dfsg/tests/prob_prog/if-then-else/1/ignore-output-1/C1.out
>  bali-phy-3.6.1+dfsg/tests/prob_prog/if-then-else/1/ignore-output-1/C1.run.json
>  bali-phy-3.6.1+dfsg/tests/prob_prog/if-then-else/1/obtained-error
>  bali-phy-3.6.1+dfsg/tests/prob_prog/if-then-else/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/if-then-else/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/infer_tree/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/infer_tree/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/lazy_sample/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/lazy_sample/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/lazy_sample/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/lazy_sample/2/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/lazy_sample/3/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/lazy_sample/3/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/observe/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/observe/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/order-two/ignore-output-1/C1.err
>  bali-phy-3.6.1+dfsg/tests/prob_prog/order-two/ignore-output-1/C1.log.json
>  bali-phy-3.6.1+dfsg/tests/prob_prog/order-two/ignore-output-1/C1.out
>  bali-phy-3.6.1+dfsg/tests/prob_prog/order-two/ignore-output-1/C1.run.json
>  bali-phy-3.6.1+dfsg/tests/prob_prog/order-two/obtained-error
>  bali-phy-3.6.1+dfsg/tests/prob_prog/order-two/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/order-two/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/popgen/li_stephens/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/popgen/li_stephens/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/regression/ignore-output-1/C1.err
>  bali-phy-3.6.1+dfsg/tests/prob_prog/regression/ignore-output-1/C1.log.json
>  bali-phy-3.6.1+dfsg/tests/prob_prog/regression/ignore-output-1/C1.out
>  bali-phy-3.6.1+dfsg/tests/prob_prog/regression/ignore-output-1/C1.run.json
>  bali-phy-3.6.1+dfsg/tests/prob_prog/regression/obtained-error
>  bali-phy-3.6.1+dfsg/tests/prob_prog/regression/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/regression/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_crp/ignore-output-1/C1.err
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_crp/ignore-output-1/C1.log.json
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_crp/ignore-output-1/C1.out
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_crp/ignore-output-1/C1.run.json
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_crp/obtained-error
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_crp/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_crp/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_tree/1/ignore-output-1/C1.err
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_tree/1/ignore-output-1/C1.log.json
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_tree/1/ignore-output-1/C1.out
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_tree/1/ignore-output-1/C1.run.json
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_tree/1/obtained-error
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_tree/1/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_tree/1/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_tree/2/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_tree/2/obtained-output
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_tree/3/obtained-exit
>  bali-phy-3.6.1+dfsg/tests/prob_prog/sample_tree/3/obtained-output
> dpkg-source: error: aborting due to unexpected upstream changes, see /tmp/bali-phy_3.6.1+dfsg-1.diff.trS0P7
> dpkg-source: info: Hint: make sure the version in debian/changelog matches the unpacked source tree
> dpkg-source: info: you can integrate the local changes with dpkg-source --commit
> dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 2
> 
> E: Command 'cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S' failed to run.

The full build log is available from:
http://qa-logs.debian.net/2023/08/13/bali-phy_3.6.1+dfsg-1_unstable.log

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.