[Debian-med-packaging] Bug#1045311: mira: Fails to build source after successful build
Lucas Nussbaum
lucas at debian.org
Sun Aug 13 20:20:59 BST 2023
Source: mira
Version: 4.9.6-10
Severity: minor
Tags: trixie sid ftbfs
User: lucas at debian.org
Usertags: ftbfs-sab-20230813 ftbfs-source-after-build
User: debian-qa at lists.debian.org
Usertags: qa-doublebuild
Hi,
This package fails to build a source package after a successful build
(dpkg-buildpackage ; dpkg-buildpackage -S).
This is probably a clear violation of Debian Policy section 4.9 (clean target),
but this is filed as severity:minor for now, because a discussion on
debian-devel showed that we might want to revisit the requirement of a working
'clean' target.
More information about this class of issues, included common problems and
solutions, is available at
https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild
Relevant part of the build log:
> cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S
> ---------------------------------------------------------------------------------------------------------------
>
> dpkg-buildpackage: info: source package mira
> dpkg-buildpackage: info: source version 4.9.6-10
> dpkg-buildpackage: info: source distribution unstable
> dpkg-buildpackage: info: source changed by Nilesh Patra <nilesh at debian.org>
> dpkg-source --before-build .
> debian/rules clean
> dh clean
> rm -f debian/mira-assembler.debhelper.log debian/mira-doc.debhelper.log debian/mira-rfam-12s-rrna.debhelper.log
> debian/rules override_dh_auto_clean
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> ( cd doc ; make clean ) || true
> make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
> Making clean in docbook
> make[3]: Entering directory '/<<PKGBUILDDIR>>/doc/docbook'
> rm -rf .libs _libs
> rm -rf *html *pdf versionfile
> rm -f *.lo
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc/docbook'
> make[3]: Entering directory '/<<PKGBUILDDIR>>/doc'
> rm -rf .libs _libs
> rm -f *.lo
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc'
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
> dh_auto_clean || true
> make -j8 distclean
> make[2]: Entering directory '/<<PKGBUILDDIR>>'
> Making distclean in man
> make[3]: Entering directory '/<<PKGBUILDDIR>>/man'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/man'
> Making distclean in src
> make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
> Making distclean in debuggersupport
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/debuggersupport'
> rm -rf .libs _libs
> test -z "libmiradebuggersupport.a" || rm -f libmiradebuggersupport.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/dbgsupport.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/debuggersupport'
> Making distclean in io
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/io'
> rm -rf .libs _libs
> rm -rf *flexer.cc *xxd.H
> test -z "libmirafio.a" || rm -f libmirafio.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/annotationmappings.Po
> rm -f ./.deps/exp.Po
> rm -f ./.deps/exp_flexer.Po
> rm -f ./.deps/fasta.Po
> rm -f ./.deps/fastq-mira.Po
> rm -f ./.deps/generalio.Po
> rm -f ./.deps/ncbiinfoxml.Po
> rm -f ./.deps/phd.Po
> rm -f ./.deps/scf.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/io'
> Making distclean in stdinc
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/stdinc'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/stdinc'
> Making distclean in errorhandling
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/errorhandling'
> rm -rf .libs _libs
> test -z "libmiraerrorhandling.a" || rm -f libmiraerrorhandling.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/errorhandling.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/errorhandling'
> Making distclean in util
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/util'
> rm -rf .libs _libs
> test -z "libmirautil.a libmiradptools.a libmirafmttext.a" || rm -f libmirautil.a libmiradptools.a libmirafmttext.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/dptools.Po
> rm -f ./.deps/fileanddisk.Po
> rm -f ./.deps/fmttext.Po
> rm -f ./.deps/machineinfo.Po
> rm -f ./.deps/misc.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/util'
> Making distclean in mira
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/mira'
> rm -rf .libs _libs
> rm -rf *flexer.cc *xxd.H
> test -z "libmiraestass.a libmira.a" || rm -f libmiraestass.a libmira.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> rm -f ./.deps/ads.Po
> rm -f ./.deps/adsfacts.Po
> rm -f ./.deps/align.Po
> rm -f ./.deps/assembly.Po
> rm -f ./.deps/assembly_buildcontigs.Po
> rm -f ./.deps/assembly_info.Po
> rm -f ./.deps/assembly_io.Po
> rm -f ./.deps/assembly_misc.Po
> rm -f ./.deps/assembly_output.Po
> rm -f ./.deps/assembly_pbcorrect.Po
> rm -f ./.deps/assembly_reduceskimhits.Po
> rm -f ./.deps/assembly_swalign.Po
> rm -f ./.deps/contig.Po
> rm -f ./.deps/contig_analysis.Po
> rm -f ./.deps/contig_consensus.Po
> rm -f ./.deps/contig_covanalysis.Po
> rm -f ./.deps/contig_edit.Po
> rm -f ./.deps/contig_featureinfo.Po
> rm -f ./.deps/contig_output.Po
> rm -f ./.deps/contig_pairconsistency.Po
> rm -f ./.deps/dataprocessing.Po
> rm -f ./.deps/dynamic.Po
> rm -f ./.deps/estassembly.Po
> rm -f ./.deps/gbf_parse.Po
> rm -f ./.deps/gff_parse.Po
> rm -f ./.deps/gff_save.Po
> rm -f ./.deps/hashstats.Po
> rm -f ./.deps/hashstats_sdbg.Po
> rm -f ./.deps/maf_parse.Po
> rm -f ./.deps/manifest.Po
> rm -f ./.deps/multitag.Po
> rm -f ./.deps/parameters.Po
> rm -f ./.deps/parameters_flexer.Po
> rm -f ./.deps/pcrcontainer.Po
> rm -f ./.deps/ppathfinder.Po
> rm -f ./.deps/preventinitfiasco.Po
> rm -f ./.deps/read.Po
> rm -f ./.deps/readgrouplib.Po
> rm -f ./.deps/readlotstat.Po
> rm -f ./.deps/readpool.Po
> rm -f ./.deps/readpool_io.Po
> rm -f ./.deps/sam_collect.Po
> rm -f ./.deps/scaffolder.Po
> rm -f ./.deps/seqtohash.Po
> rm -f ./.deps/simplebloomfilter.Po
> rm -f ./.deps/skim.Po
> rm -f ./.deps/skim_lowbph.Po
> rm -f ./.deps/warnings.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/mira'
> Making distclean in caf
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/caf'
> rm -rf .libs _libs
> rm -rf *flexer.cc
> test -z "libmiracaf.a" || rm -f libmiracaf.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/caf.Po
> rm -f ./.deps/caf_flexer.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/caf'
> Making distclean in memorc
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/memorc'
> rm -rf .libs _libs
> test -z "libmemorc.a" || rm -f libmemorc.a
> rm -f main
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/main.Po
> rm -f ./.deps/memorc.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/memorc'
> Making distclean in modules
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/modules'
> rm -rf .libs _libs
> test -z "libmiramodules.a" || rm -f libmiramodules.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/misc.Po
> rm -f ./.deps/mod_bait.Po
> rm -f ./.deps/mod_convert.Po
> rm -f ./.deps/mod_dbgreplay.Po
> rm -f ./.deps/mod_diff.Po
> rm -f ./.deps/mod_memestim.Po
> rm -f ./.deps/mod_mer.Po
> rm -f ./.deps/mod_mira.Po
> rm -f ./.deps/mod_scaffold.Po
> rm -f ./.deps/mod_sigconex.Po
> rm -f ./.deps/mod_tagsnp.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/modules'
> Making distclean in support
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/support'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/support'
> Making distclean in scripts
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/scripts'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/scripts'
> Making distclean in version
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/version'
> rm -rf .libs _libs
> test -z "libmiraversion.a" || rm -f libmiraversion.a
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/mversion.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/version'
> Making distclean in progs
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/progs'
> rm -f mira
> rm -rf .libs _libs
> rm -f miratest
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./.deps/compileinfo.itxt.xxd.Po
> rm -f ./.deps/mira.Po
> rm -f ./.deps/miratest.Po
> rm -f ./.deps/quirks.Po
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/progs'
> Making distclean in other
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src/other'
> Making distclean in sls
> make[5]: Entering directory '/<<PKGBUILDDIR>>/src/other/sls'
> Making distclean in mira-createsls
> make[6]: Entering directory '/<<PKGBUILDDIR>>/src/other/sls/mira-createsls'
> Making distclean in bin
> make[7]: Entering directory '/<<PKGBUILDDIR>>/src/other/sls/mira-createsls/bin'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/other/sls/mira-createsls/bin'
> make[7]: Entering directory '/<<PKGBUILDDIR>>/src/other/sls/mira-createsls'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/other/sls/mira-createsls'
> rm -f Makefile
> make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/other/sls/mira-createsls'
> make[6]: Entering directory '/<<PKGBUILDDIR>>/src/other/sls'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/other/sls'
> rm -f Makefile
> make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/other/sls'
> make[5]: Entering directory '/<<PKGBUILDDIR>>/src/other'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/other'
> rm -f Makefile
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/other'
> make[4]: Entering directory '/<<PKGBUILDDIR>>/src'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> test . = "." || test -z "" || rm -f
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/src'
> rm -f Makefile
> make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
> make[3]: Entering directory '/<<PKGBUILDDIR>>'
> rm -rf .libs _libs
> find . -name "*~" -exec rm -rf {} \;
> rm -f *.lo
> test -z "" || rm -f
> find . -name ".pure" -exec rm -rf {} \;
> test . = "." || test -z "" || rm -f
> find . -name "*.o" -exec rm {} \;
> rm -f libtool config.lt
> find . -name "*.a" -exec rm {} \;
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> find . -name "bla_*" -exec rm {} \;
> rm -f cscope.out cscope.in.out cscope.po.out cscope.files
> find . -name "bin.*" -exec rm {} \;
> find . -name "log.*" -exec rm {} \;
> find . -name "*.bak" -exec rm {} \;
> find . -name "ttt*" -exec rm {} \;
> find . -name "TTT*" -exec rm {} \;
> find . -name "core" -exec rm {} \;
> find . -name "*.flex.C" -exec rm {} \;
> find . -name "*flexer.cc" -exec rm {} \;
> find . -type d -name "*.dSYM" -exec rm -rf {} \;
> make -C distribution clean
> find . -name ".deps" -exec rm -rf {} \;
> make[4]: Entering directory '/<<PKGBUILDDIR>>'
> make[4]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
> rm -rf mira_`../build-aux/git-version-gen isshort ../.tarball-version`_linux-gnu_x86_64_dynamic *.tar *.gz
> rm -rf OSXstatlibs OSXstatlibs_bach
> rm -rf m4
> rm -rf Makefile Makefile.in aclocal.m4 config.status config.h config.h.in config.log configure autom4te.cache config.guess config.sub missing libtool
> rm -rf config
> rm -rf mira_*
> rm -rf 3rdparty*
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/distribution'
> make -C doc clean
> make[4]: Entering directory '/<<PKGBUILDDIR>>'
> make[4]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule.
> cd .. && make am--refresh
> make[5]: Entering directory '/<<PKGBUILDDIR>>'
> make[5]: *** No rule to make target 'am--refresh'. Stop.
> make[5]: Leaving directory '/<<PKGBUILDDIR>>'
> make[4]: *** [Makefile:366: ../aclocal.m4] Error 2
> make[4]: Leaving directory '/<<PKGBUILDDIR>>/doc'
> make[3]: *** [Makefile:887: clean-local] Error 2
> make[3]: Leaving directory '/<<PKGBUILDDIR>>'
> make[2]: *** [Makefile:416: distclean-recursive] Error 1
> make[2]: Leaving directory '/<<PKGBUILDDIR>>'
> dh_auto_clean: error: make -j8 distclean returned exit code 2
> find * -name Makefile -exec rm '{}' ';'
> find * -name '*.xxd.H' -exec rm '{}' ';'
> find * -name '*.par.H' -exec rm '{}' ';'
> find * -name 'compileinfo.*' -exec rm '{}' ';'
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
> dh_autoreconf_clean
> rm -f -- ./install-sh ./m4/ltsugar.m4 ./m4/lt\~obsolete.m4 ./m4/ltversion.m4 ./m4/libtool.m4 ./m4/ltoptions.m4 ./aclocal.m4 ./INSTALL ./autom4te.cache/requests ./autom4te.cache/traces.2 ./autom4te.cache/output.2 ./autom4te.cache/output.3 ./autom4te.cache/output.1 ./autom4te.cache/traces.1 ./autom4te.cache/traces.3 ./autom4te.cache/output.0 ./autom4te.cache/traces.0 ./Makefile.in ./compile ./ltmain.sh ./man/Makefile.in ./configure ./src/memorc/Makefile.in ./src/version/Makefile.in ./src/progs/Makefile.in ./src/caf/Makefile.in ./src/io/Makefile.in ./src/Makefile.in ./src/support/Makefile.in ./src/modules/Makefile.in ./src/errorhandling/Makefile.in ./src/other/sls/Makefile.in ./src/other/sls/mira-createsls/Makefile.in ./src/other/sls/mira-createsls/bin/Makefile.in ./src/other/Makefile.in ./src/scripts/Makefile.in
> ./src/stdinc/Makefile.in ./src/debuggersupport/Makefile.in ./src/mira/Makefile.in ./src/util/Makefile.in ./mkinstalldirs ./distribution/Makefile.in ./depcomp ./configure\~ ./doc/docbook/Makefile.in ./doc/Makefile.in ./ylwrap ./missing
> rm -f debian/autoreconf.before debian/autoreconf.after
> dh_clean
> rm -f debian/debhelper-build-stamp
> cp -an --reflink=auto debian/.debhelper/bucket/files/9be3de218833c076786b919dc34aab691611f4cd73316e7705f2673e2c41921b debian/.debhelper/bucket/files/9be3de218833c076786b919dc34aab691611f4cd73316e7705f2673e2c41921b.tmp
> mv debian/.debhelper/bucket/files/9be3de218833c076786b919dc34aab691611f4cd73316e7705f2673e2c41921b.tmp config.guess
> cp -an --reflink=auto debian/.debhelper/bucket/files/e308ae7f7f524bd790f8d4457c7c0a30f8403ffff4dd0b7d4388daca24275db4 debian/.debhelper/bucket/files/e308ae7f7f524bd790f8d4457c7c0a30f8403ffff4dd0b7d4388daca24275db4.tmp
> mv debian/.debhelper/bucket/files/e308ae7f7f524bd790f8d4457c7c0a30f8403ffff4dd0b7d4388daca24275db4.tmp config.sub
> rm -f debian/.debhelper/bucket/index
> rm -rf debian/.debhelper/
> rm -f -- debian/mira-assembler.substvars debian/mira-rfam-12s-rrna.substvars debian/mira-doc.substvars ./src/io/so.obo.xxd debian/files
> rm -fr -- debian/mira-assembler/ debian/tmp/ debian/mira-rfam-12s-rrna/ debian/mira-doc/
> find . \( \( \
> \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
> \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
> -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
> -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
> -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
> \) -exec rm -f {} + \) -o \
> \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
> dpkg-source -b .
> dpkg-source: info: using source format '3.0 (quilt)'
> dpkg-source: info: building mira using existing ./mira_4.9.6.orig.tar.bz2
> dpkg-source: info: using patch list from debian/patches/series
> dpkg-source: warning: ignoring deletion of file install-sh, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file aclocal.m4, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file INSTALL, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file ltmain.sh, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file configure, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file mkinstalldirs, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file depcomp, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file ylwrap, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file missing, use --include-removal to override
> dpkg-source: warning: ignoring deletion of directory m4
> dpkg-source: warning: ignoring deletion of file m4/ax_boost_base.m4, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_lib_expat.m4, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_boost_system.m4, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_boost_thread.m4, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_boost_iostreams.m4, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_boost_regex.m4, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_boost_filesystem.m4, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_check_zlib.m4, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file m4/ax_openmp.m4, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file man/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/memorc/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/version/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/version/mversion.H, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/progs/compileinfo.itxt.xxd.C, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/progs/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/caf/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/caf/caf_flexer.cc, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/io/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/io/exp_flexer.cc, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/support/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/modules/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/errorhandling/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/other/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/other/sls/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/other/sls/mira-createsls/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/other/sls/mira-createsls/bin/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/scripts/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/stdinc/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/debuggersupport/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/mira/parameters_flexer.cc, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/mira/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file src/util/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file distribution/Makefile, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file distribution/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file doc/Makefile, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file doc/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file doc/docbook/Makefile, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file doc/docbook/Makefile.in, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file doc/docbook/images/warning.png.orig, use --include-removal to override
> dpkg-source: warning: ignoring deletion of file doc/docbook/images/note.png.orig, use --include-removal to override
> dpkg-source: warning: file mira-4.9.6/.version has no final newline (either original or modified version)
> dpkg-source: info: local changes detected, the modified files are:
> mira-4.9.6/.version
> dpkg-source: error: aborting due to unexpected upstream changes, see /tmp/mira_4.9.6-10.diff.uDAlGs
> dpkg-source: info: Hint: make sure the version in debian/changelog matches the unpacked source tree
> dpkg-source: info: you can integrate the local changes with dpkg-source --commit
> dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 2
>
> E: Command 'cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S' failed to run.
The full build log is available from:
http://qa-logs.debian.net/2023/08/13/mira_4.9.6-10_unstable.log
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
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