[Debian-med-packaging] Bug#1046603: libpll: Fails to build source after successful build

[Lucas Nussbaum]

Source: libpll
Version: 0.3.2-4
Severity: minor
Tags: trixie sid ftbfs
User: lucas at debian.org
Usertags: ftbfs-sab-20230813 ftbfs-source-after-build
User: debian-qa at lists.debian.org
Usertags: qa-doublebuild

Hi,

This package fails to build a source package after a successful build
(dpkg-buildpackage ; dpkg-buildpackage -S).

This is probably a clear violation of Debian Policy section 4.9 (clean target),
but this is filed as severity:minor for now, because a discussion on
debian-devel showed that we might want to revisit the requirement of a working
'clean' target.

More information about this class of issues, included common problems and
solutions, is available at
https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild

Relevant part of the build log:
> cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S
> -------------------------------------------------------------------------------------------------------------------
> 
> dpkg-buildpackage: info: source package libpll
> dpkg-buildpackage: info: source version 0.3.2-4
> dpkg-buildpackage: info: source distribution unstable
> dpkg-buildpackage: info: source changed by Andreas Tille <tille at debian.org>
>  dpkg-source --before-build .
>  debian/rules clean
> dh clean
>    dh_auto_clean
> 	make -j8 distclean
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> Making distclean in src
> make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
> test -z "libpll.la" || rm -f libpll.la
> rm -rf .libs _libs
> test -z "libsimd_avx2.la libsimd_avx.la libsimd_sse.la " || rm -f libsimd_avx2.la libsimd_avx.la libsimd_sse.la 
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f 
> test . = "." || test -z "" || rm -f 
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f ./so_locations
> rm -f ./so_locations
> rm -f ./.deps/libpll_la-compress.Plo
> rm -f ./.deps/libpll_la-core_derivatives.Plo
> rm -f ./.deps/libpll_la-core_likelihood.Plo
> rm -f ./.deps/libpll_la-core_partials.Plo
> rm -f ./.deps/libpll_la-core_pmatrix.Plo
> rm -f ./.deps/libpll_la-derivatives.Plo
> rm -f ./.deps/libpll_la-fast_parsimony.Plo
> rm -f ./.deps/libpll_la-fasta.Plo
> rm -f ./.deps/libpll_la-gamma.Plo
> rm -f ./.deps/libpll_la-hardware.Plo
> rm -f ./.deps/libpll_la-lex_rtree.Plo
> rm -f ./.deps/libpll_la-lex_utree.Plo
> rm -f ./.deps/libpll_la-likelihood.Plo
> rm -f ./.deps/libpll_la-list.Plo
> rm -f ./.deps/libpll_la-maps.Plo
> rm -f ./.deps/libpll_la-models.Plo
> rm -f ./.deps/libpll_la-output.Plo
> rm -f ./.deps/libpll_la-parse_rtree.Plo
> rm -f ./.deps/libpll_la-parse_utree.Plo
> rm -f ./.deps/libpll_la-parsimony.Plo
> rm -f ./.deps/libpll_la-partials.Plo
> rm -f ./.deps/libpll_la-phylip.Plo
> rm -f ./.deps/libpll_la-pll.Plo
> rm -f ./.deps/libpll_la-random.Plo
> rm -f ./.deps/libpll_la-rtree.Plo
> rm -f ./.deps/libpll_la-stepwise.Plo
> rm -f ./.deps/libpll_la-utree.Plo
> rm -f ./.deps/libpll_la-utree_moves.Plo
> rm -f ./.deps/libpll_la-utree_svg.Plo
> rm -f ./.deps/libsimd_avx2_la-core_derivatives_avx2.Plo
> rm -f ./.deps/libsimd_avx2_la-core_likelihood_avx2.Plo
> rm -f ./.deps/libsimd_avx2_la-core_partials_avx2.Plo
> rm -f ./.deps/libsimd_avx2_la-core_pmatrix_avx2.Plo
> rm -f ./.deps/libsimd_avx2_la-fast_parsimony_avx2.Plo
> rm -f ./.deps/libsimd_avx_la-core_derivatives_avx.Plo
> rm -f ./.deps/libsimd_avx_la-core_likelihood_avx.Plo
> rm -f ./.deps/libsimd_avx_la-core_partials_avx.Plo
> rm -f ./.deps/libsimd_avx_la-core_pmatrix_avx.Plo
> rm -f ./.deps/libsimd_avx_la-fast_parsimony_avx.Plo
> rm -f ./.deps/libsimd_sse_la-core_derivatives_sse.Plo
> rm -f ./.deps/libsimd_sse_la-core_likelihood_sse.Plo
> rm -f ./.deps/libsimd_sse_la-core_partials_sse.Plo
> rm -f ./.deps/libsimd_sse_la-core_pmatrix_sse.Plo
> rm -f ./.deps/libsimd_sse_la-fast_parsimony_sse.Plo
> rm -f Makefile
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
> Making distclean in man
> make[2]: Entering directory '/<<PKGBUILDDIR>>/man'
> test -z "" || rm -f 
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f 
> test . = "." || test -z "" || rm -f 
> rm -f Makefile
> make[2]: Leaving directory '/<<PKGBUILDDIR>>/man'
> Making distclean in examples
> /bin/bash: line 21: cd: examples: No such file or directory
> make[1]: *** [Makefile:406: distclean-recursive] Error 1
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
> dh_auto_clean: error: make -j8 distclean returned exit code 2
> make: *** [debian/rules:10: clean] Error 25
> dpkg-buildpackage: error: debian/rules clean subprocess returned exit status 2
> 
> E: Command 'cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S' failed to run.


The full build log is available from:
http://qa-logs.debian.net/2023/08/13/libpll_0.3.2-4_unstable.log

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.