[Debian-med-packaging] Bug#1047737: piler: Fails to build source after successful build

[Lucas Nussbaum]

Source: piler
Version: 0~20140707-3
Severity: minor
Tags: trixie sid ftbfs
User: lucas at debian.org
Usertags: ftbfs-sab-20230813 ftbfs-source-after-build
User: debian-qa at lists.debian.org
Usertags: qa-doublebuild

Hi,

This package fails to build a source package after a successful build
(dpkg-buildpackage ; dpkg-buildpackage -S).

This is probably a clear violation of Debian Policy section 4.9 (clean target),
but this is filed as severity:minor for now, because a discussion on
debian-devel showed that we might want to revisit the requirement of a working
'clean' target.

More information about this class of issues, included common problems and
solutions, is available at
https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild

Relevant part of the build log:
> cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S
> ----------------------------------------------------------------------------------------------------------------------
> 
> dpkg-buildpackage: info: source package piler
> dpkg-buildpackage: info: source version 0~20140707-3
> dpkg-buildpackage: info: source distribution unstable
> dpkg-buildpackage: info: source changed by Andreas Tille <tille at debian.org>
>  dpkg-source --before-build .
>  debian/rules clean
> dh clean
>    dh_auto_clean
>    dh_clean
>  dpkg-source -b .
> dpkg-source: info: using source format '3.0 (quilt)'
> dpkg-source: info: building piler using existing ./piler_0~20140707.orig.tar.gz
> dpkg-source: info: using patch list from debian/patches/series
> dpkg-source: error: cannot represent change to annot.o: binary file contents changed
> dpkg-source: error: add annot.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to annotedge.o: binary file contents changed
> dpkg-source: error: add annotedge.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to cons.o: binary file contents changed
> dpkg-source: error: add cons.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to contigs.o: binary file contents changed
> dpkg-source: error: add contigs.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to crisp.o: binary file contents changed
> dpkg-source: error: add crisp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to findcc.o: binary file contents changed
> dpkg-source: error: add findcc.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to gff.o: binary file contents changed
> dpkg-source: error: add gff.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to gff2.o: binary file contents changed
> dpkg-source: error: add gff2.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to gffset.o: binary file contents changed
> dpkg-source: error: add gffset.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to glix.o: binary file contents changed
> dpkg-source: error: add glix.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to hash.o: binary file contents changed
> dpkg-source: error: add hash.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to iix.o: binary file contents changed
> dpkg-source: error: add iix.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to log.o: binary file contents changed
> dpkg-source: error: add log.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to main.o: binary file contents changed
> dpkg-source: error: add main.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to makeannot.o: binary file contents changed
> dpkg-source: error: add makeannot.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to mem.o: binary file contents changed
> dpkg-source: error: add mem.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to options.o: binary file contents changed
> dpkg-source: error: add options.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to piler2: binary file contents changed
> dpkg-source: error: add piler2 in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: warning: executable mode 0755 of 'piler2' will not be represented in diff
> dpkg-source: error: cannot represent change to progress.o: binary file contents changed
> dpkg-source: error: add progress.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to quit.o: binary file contents changed
> dpkg-source: error: add quit.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to readafa.o: binary file contents changed
> dpkg-source: error: add readafa.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to readhits.o: binary file contents changed
> dpkg-source: error: add readhits.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to readmfa.o: binary file contents changed
> dpkg-source: error: add readmfa.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to readmotif.o: binary file contents changed
> dpkg-source: error: add readmotif.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to readreps.o: binary file contents changed
> dpkg-source: error: add readreps.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to readtrs.o: binary file contents changed
> dpkg-source: error: add readtrs.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to tan.o: binary file contents changed
> dpkg-source: error: add tan.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to tanmotif2fasta.o: binary file contents changed
> dpkg-source: error: add tanmotif2fasta.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to tr.o: binary file contents changed
> dpkg-source: error: add tr.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to trs.o: binary file contents changed
> dpkg-source: error: add trs.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to trs2fasta.o: binary file contents changed
> dpkg-source: error: add trs2fasta.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to usage.o: binary file contents changed
> dpkg-source: error: add usage.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to utils.o: binary file contents changed
> dpkg-source: error: add utils.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to utils_linux.o: binary file contents changed
> dpkg-source: error: add utils_linux.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to utils_unix.o: binary file contents changed
> dpkg-source: error: add utils_unix.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to utils_win32.o: binary file contents changed
> dpkg-source: error: add utils_win32.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to writecrisp.o: binary file contents changed
> dpkg-source: error: add writecrisp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to writefasta.o: binary file contents changed
> dpkg-source: error: add writefasta.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to writeimages.o: binary file contents changed
> dpkg-source: error: add writeimages.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to writepiles.o: binary file contents changed
> dpkg-source: error: add writepiles.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to writetrs.o: binary file contents changed
> dpkg-source: error: add writetrs.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: unrepresentable changes to source
> dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 29
> 
> E: Command 'cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S' failed to run.


The full build log is available from:
http://qa-logs.debian.net/2023/08/13/piler_0~20140707-3_unstable.log

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.