[Debian-med-packaging] Bug#1042769: provean: incompatible with cd-hit >= 4.8.1-4

[Andreas Tille]

Hi Andrius,

trying to find more readers on Debian Med list to possibly reach some
cd-hit users.

Am Fri, Aug 18, 2023 at 07:01:08AM +0300 schrieb Andrius Merkys:
> Hi Andreas,
> 
> On 2023-08-17 10:49, Andreas Tille wrote:
> > thanks for reporting this issue.  You were mentioning you want to come
> > up with a patch.  Since you seem to have dived into this issue deeper
> > I assume you will care for this bug.  If not please clarify the status
> > (or may be set the "help" tag).
> 
> I feel like working on it myself as I have a setup for reproducing it (it
> needs a version of NR database, ~100 GB) and I have located the approximate
> location in the code (cd-hit output parsing). It could help me a lot if
> someone knew the changes in cd-hit output since 4.8.1, though, as I am not a
> frequent user.

I'm not using cd-hit at all.  If nobody might respond here asking upstream
might help.

Kind regards
    Andreas.

-- 
http://fam-tille.de