[Debian-med-packaging] Bug#1011656: [seqan/flexbar] Please upgrade to onetbb (Issue #38)

[Andreas Tille]

Hi,

Am Thu, Feb 09, 2023 at 07:56:16AM -0800 schrieb Liam Keegan:
> @tillea I've made an initial attempt at this in #41 if helpful for you
> 
> I don't actually use this software directly so haven't been able to test it, but at least it compiles...

Thanks a lot for the patch.  I confirm the binary builds with your patch which I applied to the Debian packaging.  Unfortunately the test seems to end in some endless loop:

    cd test ; \
    export PATH="/build/flexbar-3.5.0/obj-x86_64-linux-gnu:$PATH" ; \
    echo $PATH ; \
    export HOME=/tmp ; \
    which flexbar ; \
    ./flexbar_test.sh
    /build/flexbar-3.5.0/obj-x86_64-linux-gnu:/usr/sbin:/usr/bin:/sbin:/bin
    /build/flexbar-3.5.0/obj-x86_64-linux-gnu/flexbar
      
    Testing fasta:

Hopefully someone will be able to fire up gdb and find a fix.

Kind regards, Andreas.