[Debian-med-packaging] Bug#1040776: python-biopython: autopkgtest regression

Adrian Bunk bunk at debian.org
Mon Jul 10 13:48:01 BST 2023


Source: python-biopython
Version: 1.80+dfsg-5
Severity: serious

https://ci.debian.net/data/autopkgtest/testing/amd64/p/python-biopython/35614880/log.gz

...
580s ======================================================================
580s ERROR: test_diagram_via_methods_pdf (test_GenomeDiagram.DiagramTest.test_diagram_via_methods_pdf)
580s Construct and draw PDF using method approach.
580s ----------------------------------------------------------------------
580s Traceback (most recent call last):
580s   File "/tmp/autopkgtest-lxc.aeaunhwi/downtmp/autopkgtest_tmp/Tests/test_GenomeDiagram.py", line 1001, in test_diagram_via_methods_pdf
580s     gdd.write(output_filename, "PDF")
580s   File "/usr/lib/python3/dist-packages/Bio/Graphics/GenomeDiagram/_Diagram.py", line 244, in write
580s     return _write(self.drawing, filename, output, dpi=dpi)
580s            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
580s   File "/usr/lib/python3/dist-packages/Bio/Graphics/__init__.py", line 46, in _write
580s     from reportlab.graphics import renderPS, renderPDF, renderSVG
580s   File "/usr/lib/python3/dist-packages/reportlab/graphics/renderSVG.py", line 22, in <module>
580s     from .renderPM import _getImage
580s   File "/usr/lib/python3/dist-packages/reportlab/graphics/renderPM.py", line 20, in <module>
580s     from .utils import setFont as _setFont, RenderPMError
580s   File "/usr/lib/python3/dist-packages/reportlab/graphics/utils.py", line 9, in <module>
580s     from . _renderPM import makeT1Font
580s ModuleNotFoundError: No module named 'reportlab.graphics._renderPM'
...
582s autopkgtest [22:48:48]: test full_suite:  - - - - - - - - - - results - - - - - - - - - -
582s autopkgtest [22:48:48]: @@@@@@@@@@@@@@@@@@@@ summary
582s dependencies         FAIL non-zero exit status 1
582s full_suite           FAIL non-zero exit status 1



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