[Debian-med-packaging] Bug#1042139: libbpp-seq-omics: FTBFS: dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols file: see diff output below

Lucas Nussbaum lucas at debian.org
Wed Jul 26 21:05:19 BST 2023 

Source: libbpp-seq-omics
Version: 2.4.1-9
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lucas at debian.org
Usertags: ftbfs-20230726 ftbfs-trixie

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> dh_install
> d-shlibmove --commit \
> 	    --multiarch \
> 	    --devunversioned \
> 	    --exclude-la \
>                     --movedev debian/tmp/usr/include/* usr/include \
>                     --movedev debian/tmp/usr/lib/*/cmake usr/lib/x86_64-linux-gnu \
>                     debian/tmp/usr/lib/*/*.so
> Library package automatic movement utility
>  --> libbpp-core-dev package exists.
>  --> libbpp-seq-dev package exists.
> set -e
> install -d -m 755 debian/libbpp-seq-omics-dev/usr/lib/x86_64-linux-gnu
> install -d -m 755 debian/libbpp-seq-omics3/usr/lib/x86_64-linux-gnu
> mv debian/tmp/usr/lib/x86_64-linux-gnu/libbpp-seq-omics.a debian/libbpp-seq-omics-dev/usr/lib/x86_64-linux-gnu
> mv debian/tmp/usr/lib/x86_64-linux-gnu/libbpp-seq-omics.so debian/libbpp-seq-omics-dev/usr/lib/x86_64-linux-gnu
> mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/libbpp-seq-omics.so.3 debian/libbpp-seq-omics3/usr/lib/x86_64-linux-gnu
> mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/libbpp-seq-omics.so.3.0.0 debian/libbpp-seq-omics3/usr/lib/x86_64-linux-gnu
> PKGDEV=libbpp-seq-omics-dev
> PKGSHL=libbpp-seq-omics3
> install -d -m 755 debian/libbpp-seq-omics-dev/usr/include
> mv debian/tmp/usr/include/Bpp debian/libbpp-seq-omics-dev/usr/include
> install -d -m 755 debian/libbpp-seq-omics-dev/usr/lib/x86_64-linux-gnu
> mv debian/tmp/usr/lib/x86_64-linux-gnu/cmake debian/libbpp-seq-omics-dev/usr/lib/x86_64-linux-gnu
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
>    dh_installdocs
>    dh_installchangelogs
>    dh_perl
>    dh_link
>    dh_strip_nondeterminism
>    dh_compress
>    dh_fixperms
>    dh_missing
>    dh_dwz -a
>    dh_strip -a
>    dh_makeshlibs -a
> dpkg-gensymbols: warning: some new symbols appeared in the symbols file: see diff output below
> dpkg-gensymbols: error: some symbols or patterns disappeared in the symbols file: see diff output below
> dpkg-gensymbols: warning: debian/libbpp-seq-omics3/DEBIAN/symbols doesn't match completely debian/libbpp-seq-omics3.symbols.amd64
> --- debian/libbpp-seq-omics3.symbols.amd64 (libbpp-seq-omics3_2.4.1-9_amd64)
> +++ dpkg-gensymbolsaXh5dv	2023-07-26 19:16:12.508745512 +0000
> @@ -4,6 +4,7 @@
>   _ZN3bpp10MultiRangeImE10restrictToERKNS_5RangeImEE at Base 2.4.1
>   _ZN3bpp10MultiRangeImE12filterWithinERKNS_5RangeImEE at Base 2.4.1
>   _ZN3bpp10MultiRangeImE5clearEv at Base 2.4.1
> + _ZN3bpp10MultiRangeImE6clean_Ev at Base 2.4.1-9
>   _ZN3bpp10MultiRangeImE8addRangeERKNS_5RangeImEE at Base 2.4.1
>   _ZN3bpp10MultiRangeImED0Ev at Base 2.4.1
>   _ZN3bpp10MultiRangeImED1Ev at Base 2.4.1
> @@ -43,7 +44,7 @@
>   _ZN3bpp13AlphabetStateD0Ev at Base 2.4.1
>   _ZN3bpp13AlphabetStateD1Ev at Base 2.4.1
>   _ZN3bpp13BasicSequenceD0Ev at Base 2.4.1
> - _ZN3bpp13BasicSequenceD1Ev at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZN3bpp13BasicSequenceD1Ev at Base 2.4.1
>   _ZN3bpp13SequenceTools6subseqERKNS_8SequenceEmmRS1_ at Base 2.4.1
>   _ZN3bpp13SiteContainerD2Ev at Base 2.4.1
>   _ZN3bpp14LetterAlphabet13registerStateEPNS_13AlphabetStateE at Base 2.4.1
> @@ -479,6 +480,8 @@
>   _ZNKSt5ctypeIcE8do_widenEc at Base 2.4.1
>   _ZNSt10unique_ptrIN3bpp11MafSequenceESt14default_deleteIS1_EED1Ev at Base 2.4.1
>   _ZNSt10unique_ptrIN3bpp11MafSequenceESt14default_deleteIS1_EED2Ev at Base 2.4.1
> + _ZNSt10unique_ptrIN3bpp13BasicSequenceESt14default_deleteIS1_EED1Ev at Base 2.4.1-9
> + _ZNSt10unique_ptrIN3bpp13BasicSequenceESt14default_deleteIS1_EED2Ev at Base 2.4.1-9
>   _ZNSt10unique_ptrIN3bpp13SiteContainerESt14default_deleteIS1_EED1Ev at Base 2.4.1
>   _ZNSt10unique_ptrIN3bpp13SiteContainerESt14default_deleteIS1_EED2Ev at Base 2.4.1
>   _ZNSt10unique_ptrIN3bpp18SequenceFeatureSetESt14default_deleteIS1_EED1Ev at Base 2.4.1
> @@ -492,20 +495,20 @@
>   _ZNSt11_Deque_baseImSaImEED2Ev at Base 2.4.1
>   _ZNSt12_Vector_baseINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev at Base 2.4.1
>   _ZNSt12_Vector_baseINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev at Base 2.4.1
> - _ZNSt12_Vector_baseIPKN3bpp10BppNumberIESaIS3_EED1Ev at Base 2.4.1
> - _ZNSt12_Vector_baseIPKN3bpp10BppNumberIESaIS3_EED2Ev at Base 2.4.1
> - _ZNSt12_Vector_baseIPKN3bpp11MafSequenceESaIS3_EED1Ev at Base 2.4.1
> - _ZNSt12_Vector_baseIPKN3bpp11MafSequenceESaIS3_EED2Ev at Base 2.4.1
> - _ZNSt12_Vector_baseIPN3bpp13MafStatisticsESaIS2_EED1Ev at Base 2.4.1
> - _ZNSt12_Vector_baseIPN3bpp13MafStatisticsESaIS2_EED2Ev at Base 2.4.1
> - _ZNSt12_Vector_baseIPN3bpp13SiteContainerESaIS2_EED1Ev at Base 2.4.1
> - _ZNSt12_Vector_baseIPN3bpp13SiteContainerESaIS2_EED2Ev at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt12_Vector_baseIPKN3bpp10BppNumberIESaIS3_EED1Ev at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt12_Vector_baseIPKN3bpp10BppNumberIESaIS3_EED2Ev at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt12_Vector_baseIPKN3bpp11MafSequenceESaIS3_EED1Ev at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt12_Vector_baseIPKN3bpp11MafSequenceESaIS3_EED2Ev at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt12_Vector_baseIPN3bpp13MafStatisticsESaIS2_EED1Ev at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt12_Vector_baseIPN3bpp13MafStatisticsESaIS2_EED2Ev at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt12_Vector_baseIPN3bpp13SiteContainerESaIS2_EED1Ev at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt12_Vector_baseIPN3bpp13SiteContainerESaIS2_EED2Ev at Base 2.4.1
>   _ZNSt12_Vector_baseISt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS6_EESaIS8_EED1Ev at Base 2.4.1
>   _ZNSt12_Vector_baseISt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS6_EESaIS8_EED2Ev at Base 2.4.1
> - _ZNSt12_Vector_baseIiSaIiEED1Ev at Base 2.4.1
> - _ZNSt12_Vector_baseIiSaIiEED2Ev at Base 2.4.1
> - _ZNSt12_Vector_baseImSaImEED1Ev at Base 2.4.1
> - _ZNSt12_Vector_baseImSaImEED2Ev at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt12_Vector_baseIiSaIiEED1Ev at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt12_Vector_baseIiSaIiEED2Ev at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt12_Vector_baseImSaImEED1Ev at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt12_Vector_baseImSaImEED2Ev at Base 2.4.1
>   _ZNSt13_Bvector_baseISaIbEE13_M_deallocateEv at Base 2.4.1
>   _ZNSt15_Sp_counted_ptrIDnLN9__gnu_cxx12_Lock_policyE2EE10_M_disposeEv at Base 2.4.1
>   _ZNSt16_Sp_counted_baseILN9__gnu_cxx12_Lock_policyE2EE10_M_destroyEv at Base 2.4.1
> @@ -525,14 +528,22 @@
>   _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED1Ev at Base 2.4.1
>   _ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EED2Ev at Base 2.4.1
>   _ZNSt6vectorIPKN3bpp10BppNumberIESaIS3_EE17_M_default_appendEm at Base 2.4.1
> + _ZNSt6vectorIPKN3bpp10BppNumberIESaIS3_EED1Ev at Base 2.4.1-9
> + _ZNSt6vectorIPKN3bpp10BppNumberIESaIS3_EED2Ev at Base 2.4.1-9
>   _ZNSt6vectorIPKN3bpp11MafSequenceESaIS3_EE17_M_realloc_insertIJRKS3_EEEvN9__gnu_cxx17__normal_iteratorIPS3_S5_EEDpOT_ at Base 2.4.1
> + _ZNSt6vectorIPKN3bpp11MafSequenceESaIS3_EED1Ev at Base 2.4.1-9
> + _ZNSt6vectorIPKN3bpp11MafSequenceESaIS3_EED2Ev at Base 2.4.1-9
>   _ZNSt6vectorIPN3bpp13AlphabetStateESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 2.4.1
> + _ZNSt6vectorIPN3bpp13MafStatisticsESaIS2_EED1Ev at Base 2.4.1-9
> + _ZNSt6vectorIPN3bpp13MafStatisticsESaIS2_EED2Ev at Base 2.4.1-9
>   _ZNSt6vectorIPN3bpp13SiteContainerESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 2.4.1
> + _ZNSt6vectorIPN3bpp13SiteContainerESaIS2_EED1Ev at Base 2.4.1-9
> + _ZNSt6vectorIPN3bpp13SiteContainerESaIS2_EED2Ev at Base 2.4.1-9
>   _ZNSt6vectorIPN3bpp15SequenceFeatureESaIS2_EE17_M_realloc_insertIJS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 2.4.1
>   _ZNSt6vectorIPN3bpp17IterationListenerESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 2.4.1
>   _ZNSt6vectorIPN3bpp18SymbolListListenerESaIS2_EE17_M_realloc_insertIJRKS2_EEEvN9__gnu_cxx17__normal_iteratorIPS2_S4_EEDpOT_ at Base 2.4.1
>   _ZNSt6vectorIPN3bpp5RangeImEESaIS3_EE17_M_realloc_insertIJS3_EEEvN9__gnu_cxx17__normal_iteratorIPS3_S5_EEDpOT_ at Base 2.4.1
> - _ZNSt6vectorIPN3bpp5RangeImEESaIS3_EE8_M_eraseEN9__gnu_cxx17__normal_iteratorIPS3_S5_EE at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt6vectorIPN3bpp5RangeImEESaIS3_EE8_M_eraseEN9__gnu_cxx17__normal_iteratorIPS3_S5_EE at Base 2.4.1
>   _ZNSt6vectorIS_INSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EESaIS7_EED1Ev at Base 2.4.1
>   _ZNSt6vectorIS_INSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EESaIS7_EED2Ev at Base 2.4.1
>   _ZNSt6vectorIS_IbSaIbEESaIS1_EE17_M_realloc_insertIJRKS1_EEEvN9__gnu_cxx17__normal_iteratorIPS1_S3_EEDpOT_ at Base 2.4.1
> @@ -546,10 +557,16 @@
>   _ZNSt6vectorIbSaIbEEC2ERKS1_ at Base 2.4.1
>   _ZNSt6vectorIiSaIiEE17_M_default_appendEm at Base 2.4.1
>   _ZNSt6vectorIiSaIiEE17_M_realloc_insertIJRKiEEEvN9__gnu_cxx17__normal_iteratorIPiS1_EEDpOT_ at Base 2.4.1
> + _ZNSt6vectorIiSaIiEED1Ev at Base 2.4.1-9
> + _ZNSt6vectorIiSaIiEED2Ev at Base 2.4.1-9
>   _ZNSt6vectorIjSaIjEE14_M_fill_assignEmRKj at Base 2.4.1
>   _ZNSt6vectorIjSaIjEE17_M_realloc_insertIJjEEEvN9__gnu_cxx17__normal_iteratorIPjS1_EEDpOT_ at Base 2.4.1
>   _ZNSt6vectorImSaImEE17_M_realloc_insertIJRKmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_ at Base 2.4.1
>   _ZNSt6vectorImSaImEE17_M_realloc_insertIJmEEEvN9__gnu_cxx17__normal_iteratorIPmS1_EEDpOT_ at Base 2.4.1
> + _ZNSt6vectorImSaImEEC1ISt15_Deque_iteratorImRmPmEvEET_S7_RKS0_ at Base 2.4.1-9
> + _ZNSt6vectorImSaImEEC2ISt15_Deque_iteratorImRmPmEvEET_S7_RKS0_ at Base 2.4.1-9
> + _ZNSt6vectorImSaImEED1Ev at Base 2.4.1-9
> + _ZNSt6vectorImSaImEED2Ev at Base 2.4.1-9
>   _ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEC1IS3_EEPKcRKS3_ at Base 2.4.1
>   _ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEC2IS3_EEPKcRKS3_ at Base 2.4.1
>   _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED0Ev at Base 2.4.1
> @@ -568,33 +585,33 @@
>   _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_jESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_ at Base 2.4.1
>   _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_jESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_ at Base 2.4.1
>   _ZNSt8_Rb_treeIPN3bpp5RangeImEES3_St9_IdentityIS3_ENS0_10rangeComp_ImEESaIS3_EE16_M_insert_uniqueIS3_EESt4pairISt17_Rb_tree_iteratorIS3_EbEOT_ at Base 2.4.1
> - _ZNSt8_Rb_treeIPN3bpp5RangeImEES3_St9_IdentityIS3_ENS0_10rangeComp_ImEESaIS3_EE24_M_get_insert_unique_posERKS3_ at Base 2.4.1
> - _ZNSt8_Rb_treeIPN3bpp5RangeImEES3_St9_IdentityIS3_ENS0_10rangeComp_ImEESaIS3_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS3_ERKS3_ at Base 2.4.1
> - _ZNSt8_Rb_treeIcSt4pairIKcSt3mapImS2_ImmSt4lessImESaIS0_IKmmEEES4_SaIS0_IS5_S8_EEEESt10_Select1stISC_ES3_IcESaISC_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeIcSt4pairIKcSt3mapImS2_ImmSt4lessImESaIS0_IKmmEEES4_SaIS0_IS5_S8_EEEESt10_Select1stISC_ES3_IcESaISC_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISC_ERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeIiSt4pairIKiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEESt10_Select1stIS8_ESt4lessIiESaIS8_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeIiSt4pairIKiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEESt10_Select1stIS8_ESt4lessIiESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeIiSt4pairIKidESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeIiSt4pairIKidESt10_Select1stIS2_ESt4lessIiESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS1_EESD_IJEEEEESt17_Rb_tree_iteratorIS2_ESt23_Rb_tree_const_iteratorIS2_EDpOT_ at Base 2.4.1
> - _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeIiSt4pairIKijESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeIiSt4pairIKijESt10_Select1stIS2_ESt4lessIiESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS1_EESD_IJEEEEESt17_Rb_tree_iteratorIS2_ESt23_Rb_tree_const_iteratorIS2_EDpOT_ at Base 2.4.1
> - _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeImSt4pairIKmSt3mapImmSt4lessImESaIS0_IS1_mEEEESt10_Select1stIS8_ES4_SaIS8_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeImSt4pairIKmSt3mapImmSt4lessImESaIS0_IS1_mEEEESt10_Select1stIS8_ES4_SaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> - _ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIPN3bpp5RangeImEES3_St9_IdentityIS3_ENS0_10rangeComp_ImEESaIS3_EE24_M_get_insert_unique_posERKS3_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIPN3bpp5RangeImEES3_St9_IdentityIS3_ENS0_10rangeComp_ImEESaIS3_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS3_ERKS3_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIcSt4pairIKcSt3mapImS2_ImmSt4lessImESaIS0_IKmmEEES4_SaIS0_IS5_S8_EEEESt10_Select1stISC_ES3_IcESaISC_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIcSt4pairIKcSt3mapImS2_ImmSt4lessImESaIS0_IKmmEEES4_SaIS0_IS5_S8_EEEESt10_Select1stISC_ES3_IcESaISC_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISC_ERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIiSt4pairIKiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEESt10_Select1stIS8_ESt4lessIiESaIS8_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIiSt4pairIKiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEESt10_Select1stIS8_ESt4lessIiESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIiSt4pairIKidESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIiSt4pairIKidESt10_Select1stIS2_ESt4lessIiESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS1_EESD_IJEEEEESt17_Rb_tree_iteratorIS2_ESt23_Rb_tree_const_iteratorIS2_EDpOT_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIiSt4pairIKijESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIiSt4pairIKijESt10_Select1stIS2_ESt4lessIiESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE22_M_emplace_hint_uniqueIJRKSt21piecewise_construct_tSt5tupleIJRS1_EESD_IJEEEEESt17_Rb_tree_iteratorIS2_ESt23_Rb_tree_const_iteratorIS2_EDpOT_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeImSt4pairIKmSt3mapImmSt4lessImESaIS0_IS1_mEEEESt10_Select1stIS8_ES4_SaIS8_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeImSt4pairIKmSt3mapImmSt4lessImESaIS0_IS1_mEEEESt10_Select1stIS8_ES4_SaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE24_M_get_insert_unique_posERS1_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_ at Base 2.4.1
>   _ZSt13__heap_selectIN9__gnu_cxx17__normal_iteratorIPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIS7_SaIS7_EEEENS0_5__ops15_Iter_less_iterEEvT_SF_SF_T0_ at Base 2.4.1
>   _ZSt16__do_uninit_copyIN9__gnu_cxx17__normal_iteratorIPKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIS7_SaIS7_EEEEPS7_ET0_T_SG_SF_ at Base 2.4.1
>   _ZSt16__introsort_loopIN9__gnu_cxx17__normal_iteratorIPPN3bpp5RangeImEESt6vectorIS5_SaIS5_EEEElNS0_5__ops15_Iter_comp_iterINS2_10rangeComp_ImEEEEEvT_SG_T0_T1_ at Base 2.4.1
> - _ZSt19piecewise_construct at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZSt19piecewise_construct at Base 2.4.1
>   _ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEOS8_S9_ at Base 2.4.1
>   _ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEPKS5_OS8_ at Base 2.4.1
> - _ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEPKS5_RKS8_ at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEPKS5_RKS8_ at Base 2.4.1
>   _ZTIN3bpp10BppIntegerE at Base 2.4.1
>   _ZTIN3bpp10BppNumberIE at Base 2.4.1
>   _ZTIN3bpp10MultiRangeImEE at Base 2.4.1
> @@ -984,7 +1001,7 @@
>   _ZTv0_n24_N3bpp13AlphabetStateD0Ev at Base 2.4.1
>   _ZTv0_n24_N3bpp13AlphabetStateD1Ev at Base 2.4.1
>   _ZTv0_n24_N3bpp13BasicSequenceD0Ev at Base 2.4.1
> - _ZTv0_n24_N3bpp13BasicSequenceD1Ev at Base 2.4.1
> +#MISSING: 2.4.1-9# _ZTv0_n24_N3bpp13BasicSequenceD1Ev at Base 2.4.1
>   _ZTv0_n24_N3bpp15SequenceQualityD0Ev at Base 2.4.1
>   _ZTv0_n24_N3bpp16GffFeatureReaderD0Ev at Base 2.4.1
>   _ZTv0_n24_N3bpp16GffFeatureReaderD1Ev at Base 2.4.1
> dh_makeshlibs: error: failing due to earlier errors
> make: *** [debian/rules:10: binary] Error 25


The full build log is available from:
http://qa-logs.debian.net/2023/07/26/libbpp-seq-omics_2.4.1-9_unstable.log

All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20230726;users=lucas@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20230726&fusertaguser=lucas@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.

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