[Debian-med-packaging] Bug#1027386: pysam.get_libraries bug unreproducible

Étienne Mollier emollier at debian.org
Fri Jun 23 19:22:05 BST 2023


Hi,

I recently tried running the reproducer below for #1027386, but
now it works correctly in unstable:

	$ cat reproducer.py
	#! /usr/bin/python3
	import pysam
	for lib in pysam.get_libraries():
	    print(lib)

	$ python3.11 reproducer.py 
	/usr/lib/python3/dist-packages/pysam/libctabixproxies.cpython-311-x86_64-linux-gnu.so
	/usr/lib/python3/dist-packages/pysam/libcfaidx.cpython-311-x86_64-linux-gnu.so
	/usr/lib/python3/dist-packages/pysam/libcsamfile.cpython-311-x86_64-linux-gnu.so
	/usr/lib/python3/dist-packages/pysam/libcvcf.cpython-311-x86_64-linux-gnu.so
	/usr/lib/python3/dist-packages/pysam/libcbcf.cpython-311-x86_64-linux-gnu.so
	/usr/lib/python3/dist-packages/pysam/libctabix.cpython-311-x86_64-linux-gnu.so

I suspect the initial pairtools failure to build from source
does not occur anymore, or if does ftbfs then the symptoms are
probably different.

Have a nice day,  :)
-- 
  .''`.  Étienne Mollier <emollier at debian.org>
 : :' :  gpg: 8f91 b227 c7d6 f2b1 948c  8236 793c f67e 8f0d 11da
 `. `'   sent from /dev/pts/5, please excuse my verbosity
   `-
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