[Debian-med-packaging] Bug#1036743: Bug#1036743: kleborate: debsums reports modified files after apt-get upgrade && apt-get dist-upgrade

[Étienne Mollier]

I had difficulties reproducing the issue with piuparts, but I
manage to reproduce the problem as I suspected, with the
following upgrade path, most likely because of the inconsistent
makeblastdb version between the one used for building kleborate
in bookworm and the one "refreshed" during postinst by the one
available in bullseye:

 1.  kleborate from bullseye - ncbi-blast+ from bullseye
     dpkg --verify raises no complaints
 2.  kleborate from bookworm - ncbi-blast+ from bullseye
     dpkg --verify starts complaining here!
 3.  kleborate from bookworm - ncbi-blast+ from bookworm
     dpkg --verify still complains!

Upgrading on top of that with a package that only relies on
postinst script (and prerm to manually cleanup the artifacts):

 4.  kleborate fixed - ncbi-blast+ from bookworm
     dpkg --verify raises no complaints

The prerm change is important to ensure there are no leftovers
during package removal and purge.

The following upgrade path is also fixed:

 2. kleborate fixed - ncbi-blast+ from bullseye
    dpkg --verify raises no complaints
 3. kleborate fixed - ncbi-blast+ from bookworm
    dpkg --verify still raises no complaints

I just pushed my changes on salsa and will upload shorly if CI
tests do not raise anything else outstanding I would have missed
otherwise.

Have a nice day,  :)
-- 
Étienne Mollier <emollier at emlwks999.eu>
Fingerprint:  8f91 b227 c7d6 f2b1 948c  8236 793c f67e 8f0d 11da
Sent from /dev/pts/3, please excuse my verbosity.
-------------- next part --------------
A non-text attachment was scrubbed...
Name: signature.asc
Type: application/pgp-signature
Size: 833 bytes
Desc: not available
URL: <http://alioth-lists.debian.net/pipermail/debian-med-packaging/attachments/20230525/a5eeff6e/attachment.sig>