[Debian-med-packaging] Bug#1061931: biosquid: NMU diff for 64-bit time_t transition

[Steve Langasek]

Dear maintainer,

Please find attached a final version of this patch for the time_t
transition.  This patch is being uploaded to unstable.

Note that this adds a versioned build-dependency on dpkg-dev, to guard
against accidental backports with a wrong ABI.

Thanks!


-- System Information:
Debian Release: trixie/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 6.5.0-14-generic (SMP w/12 CPU threads; PREEMPT)
Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE
Locale: LANG=C, LC_CTYPE=C.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
-------------- next part --------------
diff -Nru biosquid-1.9g+cvs20050121/debian/changelog biosquid-1.9g+cvs20050121/debian/changelog
--- biosquid-1.9g+cvs20050121/debian/changelog	2024-01-30 10:50:46.000000000 +0000
+++ biosquid-1.9g+cvs20050121/debian/changelog	2024-02-28 18:29:54.000000000 +0000
@@ -1,3 +1,10 @@
+biosquid (1.9g+cvs20050121-15.1) unstable; urgency=medium
+
+  * Non-maintainer upload.
+  * Rename libraries for 64-bit time_t transition.  Closes: #1061931
+
+ -- Steve Langasek <vorlon at debian.org>  Wed, 28 Feb 2024 18:29:54 +0000
+
 biosquid (1.9g+cvs20050121-15) unstable; urgency=medium
 
   * Revert changes of latest upload that should have gone to experimental
diff -Nru biosquid-1.9g+cvs20050121/debian/control biosquid-1.9g+cvs20050121/debian/control
--- biosquid-1.9g+cvs20050121/debian/control	2024-01-30 10:50:46.000000000 +0000
+++ biosquid-1.9g+cvs20050121/debian/control	2024-02-28 18:29:54.000000000 +0000
@@ -3,8 +3,8 @@
 Uploaders: Andreas Tille <tille at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper-compat (= 13),
-               d-shlibs
+Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13),
+               d-shlibs (>= 0.106)
 Standards-Version: 4.6.2
 Vcs-Browser: https://salsa.debian.org/med-team/biosquid
 Vcs-Git: https://salsa.debian.org/med-team/biosquid.git
@@ -14,7 +14,7 @@
 Package: biosquid
 Architecture: any
 Depends: ${shlibs:Depends},
-         libsquid1 (= ${binary:Version}),
+         libsquid1t64 (= ${binary:Version}),
          ${misc:Depends}
 Recommends: hmmer
 Description: utilities for biological sequence analysis
@@ -28,7 +28,10 @@
  This package contains some tools to demonstrate the features of the
  SQUID library.
 
-Package: libsquid1
+Package: libsquid1t64
+Provides: ${t64:Provides}
+Replaces: libsquid1
+Conflicts: libsquid1 (<< ${source:Version})
 Architecture: any
 Section: libs
 Depends: ${shlibs:Depends},
@@ -49,7 +52,7 @@
 Architecture: any
 Section: libdevel
 Depends: ${shlibs:Depends},
-         libsquid1 (= ${binary:Version}),
+         libsquid1t64 (= ${binary:Version}),
          ${misc:Depends}
 Breaks: biosquid-dev
 Provides: biosquid-dev
diff -Nru biosquid-1.9g+cvs20050121/debian/libsquid1t64.lintian-overrides biosquid-1.9g+cvs20050121/debian/libsquid1t64.lintian-overrides
--- biosquid-1.9g+cvs20050121/debian/libsquid1t64.lintian-overrides	1970-01-01 00:00:00.000000000 +0000
+++ biosquid-1.9g+cvs20050121/debian/libsquid1t64.lintian-overrides	2024-02-28 18:29:07.000000000 +0000
@@ -0,0 +1 @@
+libsquid1t64: package-name-doesnt-match-sonames libsquid1
diff -Nru biosquid-1.9g+cvs20050121/debian/rules biosquid-1.9g+cvs20050121/debian/rules
--- biosquid-1.9g+cvs20050121/debian/rules	2024-01-30 10:50:46.000000000 +0000
+++ biosquid-1.9g+cvs20050121/debian/rules	2024-02-28 18:29:53.000000000 +0000
@@ -32,6 +32,7 @@
 	mv $(CURDIR)/debian/tmp/usr/bin/translate $(CURDIR)/debian/tmp/usr/bin/stranslate
 	dh_install
 	d-shlibmove --commit \
+		    --t64 \
 		    --multiarch \
 		    --devunversioned \
 		    --exclude-la \