[Debian-med-packaging] ncbi-blast+_2.16.0+ds-1_source.changes ACCEPTED into unstable

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Format: 1.8
Date: Thu, 25 Jul 2024 20:07:36 -0400
Source: ncbi-blast+
Architecture: source
Version: 2.16.0+ds-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Changed-By: Aaron M. Ucko <ucko at debian.org>
Closes: 891197 1074316 1075867
Changes:
 ncbi-blast+ (2.16.0+ds-1) unstable; urgency=medium
 .
   * New upstream release, which should be (more than) new enough for
     recent q2-feature-classifier.  (Closes: #1074316.)
   * debian/control:
     - Build against libnghttp2-dev, libsqlite3-dev, and libuv1-dev, newly
       needed.
     - Build against autoconf2.69.
     - Build against libpcre2-dev, as enabled by debian/patches/allow_pcre2.
     - Stop building against 2to3, which may not be around much longer.
   * debian/patches: Update for new release, mostly formally.
   * debian/patches/2to3 (new): Cache 2to3 diff for
     windowmasker_2.2.22_adapter.
   * debian/patches/allow_pcre2 (new): Allow use of PCRE2.
   * debian/patches/series:
     - Move system_mbedtls_only up in conjunction with incorporating part
       of an upstream patch needed by support_mbedtls3.
     - Comment out reprobuild; I'm all for reproducibility, but the package
       already automatically builds with flags that make __FILE__ relative,
       and many of its uses are in header-defined macros that intend to
       pick up their callers' paths.
   * debian/patches/support_mbedtls3 (new): Support (but don't require)
     Mbed TLS 3.x.  (Closes: #1075867.)
   * debian/patches/system_mbedtls: Extend to cover ncbi_mbedtls.c (as in
     https://github.com/ncbi/ncbi-cxx-toolkit-public/commit/f9c7297dd1)
     and Makefile.xxconnect2.lib.
   * debian/rules:
     - Regenerate configure and config.h.in with Autoconf 2.69.
     - Build against PCRE2, as enabled by debian/patches/allow_pcre2.
       (Closes: #891197.)
     - Tune flags: Add --without-strip to make --with-symbols effective;
       switch off warnings from __DATE__/__TIME__ usage, since
       dpkg-buildpackage's SOURCE_DATE_EPOCH injection should suffice.
     - Extend generated-sources cleanup to objtools/eutils (not entirely
       straightforward due to input format variation).
     - Drop build-time 2to3 invocation in favor of debian/patches/2to3.
   * debian/source/lintian-overrides: No more rapidjson10 (just ...11).
   * Standards-Version: 4.7.0 (routine-update)
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Files:
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