[Debian-med-packaging] Bug#1077393: seqan3: FTBFS: stl_algobase.h:1874:39: error: ‘int __builtin_memcmp(const void*, const void*, long unsigned int) ’ specified bound [9223372036854775808, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Werror=stringop-overread]
Lucas Nussbaum
lucas at debian.org
Mon Jul 29 06:46:20 BST 2024
Source: seqan3
Version: 3.3.0+ds-1
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lucas at debian.org
Usertags: ftbfs-20240728 ftbfs-trixie
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/<<PKGBUILDDIR>>/test/include -I/<<PKGBUILDDIR>>/include -isystem /<<PKGBUILDDIR>>/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fuse-ld=gold -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Werror -Wno-interference-size -std=c++20 -MD -MT search/CMakeFiles/search_scheme_test.dir/search_scheme_test.cpp.o -MF search/CMakeFiles/search_scheme_test.dir/search_scheme_test.cpp.o.d -o search/CMakeFiles/search_scheme_test.dir/search_scheme_test.cpp.o -c /<<PKGBUILDDIR>>/test/unit/search/search_scheme_test.cpp
> In file included from /<<PKGBUILDDIR>>/include/seqan3/search/detail/search_common.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/search/detail/search_scheme_algorithm.hpp:17,
> from /<<PKGBUILDDIR>>/test/unit/search/search_scheme_test.cpp:13:
> /<<PKGBUILDDIR>>/include/seqan3/core/platform.hpp:85:17: note: ‘#pragma message: Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC.’
> 85 | "Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC."
> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> In file included from /usr/include/c++/14/bits/stl_uninitialized.h:63,
> from /usr/include/c++/14/memory:69,
> from /usr/include/gtest/gtest.h:55,
> from /<<PKGBUILDDIR>>/test/unit/search/search_scheme_test.cpp:8:
> In function ‘constexpr decltype (__comp((* __first1), (* __first2))) std::lexicographical_compare_three_way(_InputIter1, _InputIter1, _InputIter2, _InputIter2, _Comp) [with _InputIter1 = __gnu_cxx::__normal_iterator<const unsigned char*, vector<unsigned char> >; _InputIter2 = __gnu_cxx::__normal_iterator<const unsigned char*, vector<unsigned char> >; _Comp = __detail::_Synth3way]’,
> inlined from ‘constexpr std::__detail::__synth3way_t<_Iterator> std::operator<=>(const vector<_Tp, _Alloc>&, const vector<_Tp, _Alloc>&) [with _Tp = unsigned char; _Alloc = allocator<unsigned char>]’ at /usr/include/c++/14/bits/stl_vector.h:2071:52,
> inlined from ‘constexpr bool __gnu_cxx::__ops::_Val_less_iter::operator()(_Value&, _Iterator) const [with _Value = std::vector<unsigned char>; _Iterator = __gnu_cxx::__normal_iterator<std::vector<unsigned char>*, std::vector<std::vector<unsigned char> > >]’ at /usr/include/c++/14/bits/predefined_ops.h:98:22,
> inlined from ‘constexpr void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<vector<unsigned char>*, vector<vector<unsigned char> > >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’ at /usr/include/c++/14/bits/stl_algo.h:1757:20,
> inlined from ‘constexpr void std::__unguarded_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<vector<unsigned char>*, vector<vector<unsigned char> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/14/bits/stl_algo.h:1798:32,
> inlined from ‘constexpr void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<vector<unsigned char>*, vector<vector<unsigned char> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/14/bits/stl_algo.h:1818:35,
> inlined from ‘constexpr void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<vector<unsigned char>*, vector<vector<unsigned char> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/14/bits/stl_algo.h:1908:31:
> /usr/include/c++/14/bits/stl_algobase.h:1874:39: error: ‘int __builtin_memcmp(const void*, const void*, long unsigned int)’ specified bound [9223372036854775808, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Werror=stringop-overread]
> 1874 | = __builtin_memcmp(&*__first1, &*__first2, __blen) <=> 0;
> | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> cc1plus: all warnings being treated as errors
> [236/622] /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/<<PKGBUILDDIR>>/test/include -I/<<PKGBUILDDIR>>/include -isystem /<<PKGBUILDDIR>>/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fuse-ld=gold -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Werror -Wno-interference-size -std=c++20 -MD -MT search/dream_index/CMakeFiles/interleaved_bloom_filter_test.dir/interleaved_bloom_filter_test.cpp.o -MF search/dream_index/CMakeFiles/interleaved_bloom_filter_test.dir/interleaved_bloom_filter_test.cpp.o.d -o search/dream_index/CMakeFiles/interleaved_bloom_filter_test.dir/interleaved_bloom_filter_test.cpp.o -c /<<PKGBUILDDIR>>/test/unit/search/dream_index/interleaved_bloom_filter_test.cpp
> In file included from /<<PKGBUILDDIR>>/include/seqan3/core/concept/cereal.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/search/dream_index/interleaved_bloom_filter.hpp:20,
> from /<<PKGBUILDDIR>>/test/unit/search/dream_index/interleaved_bloom_filter_test.cpp:10:
> /<<PKGBUILDDIR>>/include/seqan3/core/platform.hpp:85:17: note: ‘#pragma message: Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC.’
> 85 | "Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC."
> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> [237/622] /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/<<PKGBUILDDIR>>/test/include -I/<<PKGBUILDDIR>>/include -isystem /<<PKGBUILDDIR>>/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fuse-ld=gold -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Werror -Wno-interference-size -std=c++20 -MD -MT search/CMakeFiles/search_scheme_algorithm_test.dir/search_scheme_algorithm_test.cpp.o -MF search/CMakeFiles/search_scheme_algorithm_test.dir/search_scheme_algorithm_test.cpp.o.d -o search/CMakeFiles/search_scheme_algorithm_test.dir/search_scheme_algorithm_test.cpp.o -c /<<PKGBUILDDIR>>/test/unit/search/search_scheme_algorithm_test.cpp
> In file included from /<<PKGBUILDDIR>>/include/seqan3/utility/char_operations/pretty_print.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/exception.hpp:19,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/concept.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/detail/debug_stream_alphabet.hpp:15,
> from /<<PKGBUILDDIR>>/test/unit/search/search_scheme_algorithm_test.cpp:13:
> /<<PKGBUILDDIR>>/include/seqan3/core/platform.hpp:85:17: note: ‘#pragma message: Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC.’
> 85 | "Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC."
> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> [238/622] /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/<<PKGBUILDDIR>>/test/include -I/<<PKGBUILDDIR>>/include -isystem /<<PKGBUILDDIR>>/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fuse-ld=gold -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Werror -Wno-interference-size -std=c++20 -MD -MT search/configuration/CMakeFiles/search_config_common_test.dir/search_config_common_test.cpp.o -MF search/configuration/CMakeFiles/search_config_common_test.dir/search_config_common_test.cpp.o.d -o search/configuration/CMakeFiles/search_config_common_test.dir/search_config_common_test.cpp.o -c /<<PKGBUILDDIR>>/test/unit/search/configuration/search_config_common_test.cpp
> In file included from /<<PKGBUILDDIR>>/include/seqan3/utility/type_traits/concept.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/utility/type_traits/detail/transformation_trait_or.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/core/detail/template_inspection.hpp:18,
> from /<<PKGBUILDDIR>>/include/seqan3/core/configuration/detail/concept.hpp:20,
> from /<<PKGBUILDDIR>>/include/seqan3/core/configuration/configuration.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/search/configuration/default_configuration.hpp:16,
> from /<<PKGBUILDDIR>>/include/seqan3/search/configuration/all.hpp:182,
> from /<<PKGBUILDDIR>>/test/unit/search/configuration/search_config_common_test.cpp:12:
> /<<PKGBUILDDIR>>/include/seqan3/core/platform.hpp:85:17: note: ‘#pragma message: Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC.’
> 85 | "Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC."
> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> [239/622] /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/<<PKGBUILDDIR>>/test/include -I/<<PKGBUILDDIR>>/include -isystem /<<PKGBUILDDIR>>/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fuse-ld=gold -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Werror -Wno-interference-size -std=c++20 -MD -MT search/fm_index/CMakeFiles/fm_index_dna4_test.dir/fm_index_dna4_test.cpp.o -MF search/fm_index/CMakeFiles/fm_index_dna4_test.dir/fm_index_dna4_test.cpp.o.d -o search/fm_index/CMakeFiles/fm_index_dna4_test.dir/fm_index_dna4_test.cpp.o -c /<<PKGBUILDDIR>>/test/unit/search/fm_index/fm_index_dna4_test.cpp
> In file included from /<<PKGBUILDDIR>>/include/seqan3/utility/char_operations/pretty_print.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/exception.hpp:19,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/concept.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/alphabet_base.hpp:19,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/nucleotide/nucleotide_base.hpp:15,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/nucleotide/dna4.hpp:17,
> from /<<PKGBUILDDIR>>/test/unit/search/fm_index/fm_index_dna4_test.cpp:8:
> /<<PKGBUILDDIR>>/include/seqan3/core/platform.hpp:85:17: note: ‘#pragma message: Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC.’
> 85 | "Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC."
> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> [240/622] /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/<<PKGBUILDDIR>>/test/include -I/<<PKGBUILDDIR>>/include -isystem /<<PKGBUILDDIR>>/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fuse-ld=gold -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Werror -Wno-interference-size -std=c++20 -MD -MT search/fm_index/CMakeFiles/bi_fm_index_dna4_test.dir/bi_fm_index_dna4_test.cpp.o -MF search/fm_index/CMakeFiles/bi_fm_index_dna4_test.dir/bi_fm_index_dna4_test.cpp.o.d -o search/fm_index/CMakeFiles/bi_fm_index_dna4_test.dir/bi_fm_index_dna4_test.cpp.o -c /<<PKGBUILDDIR>>/test/unit/search/fm_index/bi_fm_index_dna4_test.cpp
> In file included from /<<PKGBUILDDIR>>/include/seqan3/utility/char_operations/pretty_print.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/exception.hpp:19,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/concept.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/alphabet_base.hpp:19,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/nucleotide/nucleotide_base.hpp:15,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/nucleotide/dna4.hpp:17,
> from /<<PKGBUILDDIR>>/test/unit/search/fm_index/bi_fm_index_dna4_test.cpp:8:
> /<<PKGBUILDDIR>>/include/seqan3/core/platform.hpp:85:17: note: ‘#pragma message: Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC.’
> 85 | "Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC."
> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> [241/622] /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/<<PKGBUILDDIR>>/test/include -I/<<PKGBUILDDIR>>/include -isystem /<<PKGBUILDDIR>>/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fuse-ld=gold -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Werror -Wno-interference-size -std=c++20 -MD -MT search/CMakeFiles/search_collection_test.dir/search_collection_test.cpp.o -MF search/CMakeFiles/search_collection_test.dir/search_collection_test.cpp.o.d -o search/CMakeFiles/search_collection_test.dir/search_collection_test.cpp.o -c /<<PKGBUILDDIR>>/test/unit/search/search_collection_test.cpp
> In file included from /<<PKGBUILDDIR>>/include/seqan3/utility/char_operations/pretty_print.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/exception.hpp:19,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/concept.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/alphabet_base.hpp:19,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/nucleotide/nucleotide_base.hpp:15,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/nucleotide/dna4.hpp:17,
> from /<<PKGBUILDDIR>>/test/unit/search/search_collection_test.cpp:13:
> /<<PKGBUILDDIR>>/include/seqan3/core/platform.hpp:85:17: note: ‘#pragma message: Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC.’
> 85 | "Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC."
> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> [242/622] /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/<<PKGBUILDDIR>>/test/include -I/<<PKGBUILDDIR>>/include -isystem /<<PKGBUILDDIR>>/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fuse-ld=gold -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -pedantic -Wall -Wextra -Werror -Wno-interference-size -std=c++20 -MD -MT search/CMakeFiles/search_test.dir/search_test.cpp.o -MF search/CMakeFiles/search_test.dir/search_test.cpp.o.d -o search/CMakeFiles/search_test.dir/search_test.cpp.o -c /<<PKGBUILDDIR>>/test/unit/search/search_test.cpp
> In file included from /<<PKGBUILDDIR>>/include/seqan3/utility/char_operations/pretty_print.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/exception.hpp:19,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/concept.hpp:17,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/alphabet_base.hpp:19,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/nucleotide/nucleotide_base.hpp:15,
> from /<<PKGBUILDDIR>>/include/seqan3/alphabet/nucleotide/dna4.hpp:17,
> from /<<PKGBUILDDIR>>/test/unit/search/search_test.cpp:13:
> /<<PKGBUILDDIR>>/include/seqan3/core/platform.hpp:85:17: note: ‘#pragma message: Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC.’
> 85 | "Your compiler is newer than the latest supported compiler of this SeqAn version (gcc-13). It might be that SeqAn does not compile due to this. You can disable this warning by setting -DSEQAN3_DISABLE_NEWER_COMPILER_DIAGNOSTIC."
> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> ninja: build stopped: subcommand failed.
> dh_auto_build: error: cd build_unit && LC_ALL=C.UTF-8 ninja -j8 -v returned exit code 1
> make[1]: *** [debian/rules:44: override_dh_auto_build] Error 25
The full build log is available from:
http://qa-logs.debian.net/2024/07/28/seqan3_3.3.0+ds-1_unstable.log
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20240728;users=lucas@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20240728&fusertaguser=lucas@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
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