[Debian-med-packaging] Bug#1067347: bmtk: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.12 3.11" returned exit code 13
Lucas Nussbaum
lucas at debian.org
Wed Mar 20 20:56:35 GMT 2024
Source: bmtk
Version: 1.0.8+ds-2
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lucas at debian.org
Usertags: ftbfs-20240319 ftbfs-trixie
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> dh_auto_build
> I: pybuild base:305: /usr/bin/python3.12 setup.py build
> running build
> running build_py
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk
> copying bmtk/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator
> copying bmtk/simulator/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils
> copying bmtk/utils/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils
> copying bmtk/utils/lazy_property.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils
> copying bmtk/utils/hdf5_helper.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils
> copying bmtk/utils/sim_setup.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> copying bmtk/builder/node.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> copying bmtk/builder/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> copying bmtk/builder/node_pool.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> copying bmtk/builder/builder_utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> copying bmtk/builder/id_generator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> copying bmtk/builder/edge.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> copying bmtk/builder/connector.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> copying bmtk/builder/connection_map.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> copying bmtk/builder/network_builder.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> copying bmtk/builder/iterator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> copying bmtk/builder/index_builders.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> copying bmtk/builder/node_set.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> copying bmtk/builder/functor_cache.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> copying bmtk/builder/networks.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/analyzer
> copying bmtk/analyzer/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/analyzer
> copying bmtk/analyzer/cell_vars.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/analyzer
> copying bmtk/analyzer/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/analyzer
> copying bmtk/analyzer/io_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/analyzer
> copying bmtk/analyzer/spikes_analyzer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/analyzer
> copying bmtk/analyzer/ecp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/analyzer
> copying bmtk/analyzer/spikes_loader.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/analyzer
> copying bmtk/analyzer/firing_rates.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/analyzer
> copying bmtk/analyzer/spike_trains.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/analyzer
> copying bmtk/analyzer/compartment.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/analyzer
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/pointsimulator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/glif_utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/pointnetwork.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/io_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/pyfunction_cache.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/sonata_adaptors.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/nest_utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/gids.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/config.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/property_map.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/io_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/cell_models.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/pyfunction_cache.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/cell.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/transfer_functions.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/filters.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/sonata_adaptors.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/filternetwork.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/filtersimulator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/config.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core
> copying bmtk/simulator/core/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core
> copying bmtk/simulator/core/node_population.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core
> copying bmtk/simulator/core/node_sets.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core
> copying bmtk/simulator/core/simulator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core
> copying bmtk/simulator/core/simulation_config_validator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core
> copying bmtk/simulator/core/io_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core
> copying bmtk/simulator/core/pyfunction_cache.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core
> copying bmtk/simulator/core/edge_population.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core
> copying bmtk/simulator/core/simulator_network.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core
> copying bmtk/simulator/core/simulation_config.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core
> copying bmtk/simulator/core/network_reader.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core
> copying bmtk/simulator/core/graph.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/utils
> copying bmtk/simulator/utils/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/utils
> copying bmtk/simulator/utils/simulation_reports.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/utils
> copying bmtk/simulator/utils/simulation_inputs.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/utils
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/popsimulator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/popnode.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/sonata_adaptors.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/popnetwork.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/config.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/popedge.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/popnet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/virtualcell.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/biosimulator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/nrn.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/pointprocesscell.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/iclamp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/io_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/pyfunction_cache.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/bionetwork.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/cell.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/nml_reader.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/seclamp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/sonata_adaptors.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/gids.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/pointsomacell.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/config.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/biocell.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/morphology.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet/default_setters
> copying bmtk/simulator/pointnet/default_setters/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet/default_setters
> copying bmtk/simulator/pointnet/default_setters/synaptic_weights.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet/default_setters
> copying bmtk/simulator/pointnet/default_setters/synapse_models.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet/default_setters
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet/modules
> copying bmtk/simulator/pointnet/modules/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet/modules
> copying bmtk/simulator/pointnet/modules/iclamp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet/modules
> copying bmtk/simulator/pointnet/modules/ecephys_module.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet/modules
> copying bmtk/simulator/pointnet/modules/record_spikes.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet/modules
> copying bmtk/simulator/pointnet/modules/multimeter_reporter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/pointnet/modules
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/default_setters
> copying bmtk/simulator/filternet/default_setters/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/default_setters
> copying bmtk/simulator/filternet/default_setters/cell_loaders.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/default_setters
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/poissongeneration.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/kernel.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/transferfunction.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/fitfuns.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/cellmodel.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/util_fns.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/singleunitcell.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/cursor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/linearfilter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/lnunit.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/spatialfilter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/gaborfilter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/lgnmodel1.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/movie.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/make_cell_list.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/temporalfilter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/cellmetrics.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/utilities.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/lattice_unit_constructor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/modules
> copying bmtk/simulator/filternet/modules/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/modules
> copying bmtk/simulator/filternet/modules/base.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/modules
> copying bmtk/simulator/filternet/modules/create_spikes.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/modules
> copying bmtk/simulator/filternet/modules/record_rates.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/modules
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core/sonata_reader
> copying bmtk/simulator/core/sonata_reader/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core/sonata_reader
> copying bmtk/simulator/core/sonata_reader/edge_adaptor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core/sonata_reader
> copying bmtk/simulator/core/sonata_reader/node_adaptor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core/sonata_reader
> copying bmtk/simulator/core/sonata_reader/network_reader.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core/sonata_reader
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core/modules
> copying bmtk/simulator/core/modules/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core/modules
> copying bmtk/simulator/core/modules/iclamp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core/modules
> copying bmtk/simulator/core/modules/simulator_module.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core/modules
> copying bmtk/simulator/core/modules/ecephys_module.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core/modules
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/default_setters
> copying bmtk/simulator/bionet/default_setters/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/default_setters
> copying bmtk/simulator/bionet/default_setters/synaptic_weights.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/default_setters
> copying bmtk/simulator/bionet/default_setters/cell_models.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/default_setters
> copying bmtk/simulator/bionet/default_setters/synapse_models.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/default_setters
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/comsol.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/iclamp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/record_netcons.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/save_synapses.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/xstim_waveforms.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/xstim.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/ecp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/ecephys_module.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/record_cellvars.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/record_spikes.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/sim_module.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/record_clamp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/modules
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/compile_mechanisms
> copying bmtk/utils/compile_mechanisms/compile_mechanisms.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/compile_mechanisms
> copying bmtk/utils/compile_mechanisms/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/compile_mechanisms
> copying bmtk/utils/compile_mechanisms/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/compile_mechanisms
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports
> copying bmtk/utils/reports/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports
> copying bmtk/utils/reports/current_writer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/population.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/group.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/node.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/column_property.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/edge.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/types_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/file_root.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/file.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/io
> copying bmtk/utils/io/cell_vars.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/io
> copying bmtk/utils/io/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/io
> copying bmtk/utils/io/firing_rates.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/io
> copying bmtk/utils/io/ioutils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/io
> copying bmtk/utils/io/spike_trains.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/io
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/create_environment
> copying bmtk/utils/create_environment/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/create_environment
> copying bmtk/utils/create_environment/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/create_environment
> copying bmtk/utils/create_environment/env_builder.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/create_environment
> copying bmtk/utils/create_environment/create_environment.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/create_environment
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/compartment
> copying bmtk/utils/reports/compartment/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/compartment
> copying bmtk/utils/reports/compartment/compartment_report.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/compartment
> copying bmtk/utils/reports/compartment/compartment_writer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/compartment
> copying bmtk/utils/reports/compartment/compartment_reader.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/compartment
> copying bmtk/utils/reports/compartment/core.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/compartment
> copying bmtk/utils/reports/compartment/plotting.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/compartment
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/spike_trains_api.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/stats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/spike_train_buffer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/spikes_file_writers.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/core.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/spike_train_readers.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/spike_trains.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/plotting.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/reports/spike_trains
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata/config
> copying bmtk/utils/sonata/config/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata/config
> copying bmtk/utils/sonata/config/sonata_config.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata/config
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/network_adaptors
> copying bmtk/builder/network_adaptors/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/network_adaptors
> copying bmtk/builder/network_adaptors/edges_collator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/network_adaptors
> copying bmtk/builder/network_adaptors/dm_network.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/network_adaptors
> copying bmtk/builder/network_adaptors/dm_network_orig.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/network_adaptors
> copying bmtk/builder/network_adaptors/nxnetwork.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/network_adaptors
> copying bmtk/builder/network_adaptors/edge_props_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/network_adaptors
> copying bmtk/builder/network_adaptors/network.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/network_adaptors
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/edges_sorter
> copying bmtk/builder/edges_sorter/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/edges_sorter
> copying bmtk/builder/edges_sorter/memory_sorter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/edges_sorter
> copying bmtk/builder/edges_sorter/merge_sorter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/edges_sorter
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/auxi
> copying bmtk/builder/auxi/edge_connectors.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/auxi
> copying bmtk/builder/auxi/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/auxi
> copying bmtk/builder/auxi/node_params.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/auxi
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/bionet
> copying bmtk/builder/bionet/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/bionet
> copying bmtk/builder/bionet/swc_reader.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/builder/bionet
> running egg_info
> creating bmtk.egg-info
> writing bmtk.egg-info/PKG-INFO
> writing dependency_links to bmtk.egg-info/dependency_links.txt
> writing requirements to bmtk.egg-info/requires.txt
> writing top-level names to bmtk.egg-info/top_level.txt
> writing manifest file 'bmtk.egg-info/SOURCES.txt'
> reading manifest file 'bmtk.egg-info/SOURCES.txt'
> reading manifest template 'MANIFEST.in'
> warning: no files found matching '*.txt' under directory 'bmtk'
> warning: no files found matching '*.cfg' under directory 'bmtk'
> adding license file 'LICENSE.txt'
> writing manifest file 'bmtk.egg-info/SOURCES.txt'
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.simulator.bionet.default_templates' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.simulator.bionet.default_templates' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.simulator.bionet.default_templates' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.simulator.bionet.default_templates' to be distributed and are
> already explicitly excluding 'bmtk.simulator.bionet.default_templates' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.simulator.bionet.import3d' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.simulator.bionet.import3d' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.simulator.bionet.import3d' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.simulator.bionet.import3d' to be distributed and are
> already explicitly excluding 'bmtk.simulator.bionet.import3d' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.simulator.bionet.schemas' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.simulator.bionet.schemas' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.simulator.bionet.schemas' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.simulator.bionet.schemas' to be distributed and are
> already explicitly excluding 'bmtk.simulator.bionet.schemas' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.simulator.core.sonata_schemas' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.simulator.core.sonata_schemas' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.simulator.core.sonata_schemas' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.simulator.core.sonata_schemas' to be distributed and are
> already explicitly excluding 'bmtk.simulator.core.sonata_schemas' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.simulator.filternet.lgnmodel.cell_metrics' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.simulator.filternet.lgnmodel.cell_metrics' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.simulator.filternet.lgnmodel.cell_metrics' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.simulator.filternet.lgnmodel.cell_metrics' to be distributed and are
> already explicitly excluding 'bmtk.simulator.filternet.lgnmodel.cell_metrics' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet.biophysical_neuron_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet.biophysical_neuron_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet.biophysical_neuron_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet.biophysical_neuron_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet.biophysical_neuron_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet.filter_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet.filter_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet.filter_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet.filter_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet.filter_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet.mechanisms.modfiles' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet.mechanisms.modfiles' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet.mechanisms.modfiles' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet.mechanisms.modfiles' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet.mechanisms.modfiles' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet.morphologies' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet.morphologies' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet.morphologies' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet.morphologies' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet.morphologies' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet.point_neuron_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet.point_neuron_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet.point_neuron_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet.point_neuron_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet.point_neuron_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet.synaptic_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet.synaptic_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet.synaptic_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet.synaptic_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet.synaptic_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet.templates' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet.templates' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet.templates' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet.templates' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet.templates' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.filternet' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.filternet' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.filternet' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.filternet' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.filternet' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.filternet.filter_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.filternet.filter_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.filternet.filter_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.filternet.filter_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.filternet.filter_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.pointnet' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.pointnet' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.pointnet' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.pointnet' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.pointnet' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.pointnet.filter_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.pointnet.filter_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.pointnet.filter_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.pointnet.filter_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.pointnet.filter_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.pointnet.point_neuron_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.pointnet.point_neuron_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.pointnet.point_neuron_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.pointnet.point_neuron_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.pointnet.point_neuron_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.pointnet.synaptic_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.pointnet.synaptic_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.pointnet.synaptic_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.pointnet.synaptic_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.pointnet.synaptic_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.popnet' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.popnet' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.popnet' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.popnet' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.popnet' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.popnet.population_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.popnet.population_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.popnet.population_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.popnet.population_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.popnet.population_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.popnet.synaptic_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.popnet.synaptic_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.popnet.synaptic_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.popnet.synaptic_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.popnet.synaptic_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts
> copying bmtk/utils/scripts/sonata.circuit_config.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts
> copying bmtk/utils/scripts/sonata.simulation_config.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet
> copying bmtk/utils/scripts/bionet/default_config.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet
> copying bmtk/utils/scripts/bionet/run_bionet.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> copying bmtk/utils/scripts/bionet/biophysical_neuron_models/318331342_fit.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> copying bmtk/utils/scripts/bionet/biophysical_neuron_models/472363762_fit.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> copying bmtk/utils/scripts/bionet/biophysical_neuron_models/472912177_fit.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> copying bmtk/utils/scripts/bionet/biophysical_neuron_models/473862421_fit.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> copying bmtk/utils/scripts/bionet/biophysical_neuron_models/473863035_fit.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> copying bmtk/utils/scripts/bionet/biophysical_neuron_models/473863510_fit.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> copying bmtk/utils/scripts/bionet/biophysical_neuron_models/485184849_fit.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sOFF_TF1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sOFF_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sOFF_TF2.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sOFF_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sOFF_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sON_TF1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sON_TF2.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sON_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sON_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/tOFF_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/tOFF_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/tOFF_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/tON_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/tON_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/tON_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/tON_TF8_demo.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/filter_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/CaDynamics.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Ca_HVA.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Ca_LVA.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Ih.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Im.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Im_v2.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/K_P.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/K_T.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Kd.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Kv2like.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Kv3_1.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/NaTa.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/NaTs.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/NaV.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Nap.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/SK.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/vecevent.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/morphologies
> copying bmtk/utils/scripts/bionet/morphologies/Nr5a1_471087815_m.swc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/morphologies
> copying bmtk/utils/scripts/bionet/morphologies/Pvalb_469628681_m.swc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/morphologies
> copying bmtk/utils/scripts/bionet/morphologies/Pvalb_470522102_m.swc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/morphologies
> copying bmtk/utils/scripts/bionet/morphologies/Rorb_325404214_m.swc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/morphologies
> copying bmtk/utils/scripts/bionet/morphologies/Scnn1a_473845048_m.swc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/morphologies
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/point_neuron_models
> copying bmtk/utils/scripts/bionet/point_neuron_models/IntFire1_exc_1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/point_neuron_models
> copying bmtk/utils/scripts/bionet/point_neuron_models/IntFire1_inh_1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/point_neuron_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/synaptic_models
> copying bmtk/utils/scripts/bionet/synaptic_models/AMPA_ExcToExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/synaptic_models
> copying bmtk/utils/scripts/bionet/synaptic_models/AMPA_ExcToInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/synaptic_models
> copying bmtk/utils/scripts/bionet/synaptic_models/GABA_InhToExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/synaptic_models
> copying bmtk/utils/scripts/bionet/synaptic_models/GABA_InhToInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/synaptic_models
> copying bmtk/utils/scripts/bionet/synaptic_models/instantaneousExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/synaptic_models
> copying bmtk/utils/scripts/bionet/synaptic_models/instantaneousInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/synaptic_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/templates
> copying bmtk/utils/scripts/bionet/templates/BioAllen_old.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/templates
> copying bmtk/utils/scripts/bionet/templates/BioAxonStub.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/templates
> copying bmtk/utils/scripts/bionet/templates/Biophys1.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/bionet/templates
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet
> copying bmtk/utils/scripts/filternet/run_filternet.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sOFF_TF1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sOFF_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sOFF_TF2.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sOFF_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sOFF_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sON_TF1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sON_TF2.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sON_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sON_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/tOFF_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/tOFF_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/tOFF_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/tON_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/tON_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/tON_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/tON_TF8_demo.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/filternet/filter_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet
> copying bmtk/utils/scripts/pointnet/run_pointnet.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sOFF_TF1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sOFF_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sOFF_TF2.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sOFF_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sOFF_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sON_TF1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sON_TF2.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sON_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sON_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/tOFF_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/tOFF_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/tOFF_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/tON_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/tON_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/tON_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/tON_TF8_demo.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/filter_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/472363762_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/472912177_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/473862421_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/473863035_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/473863510_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/IntFire1_exc_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/IntFire1_inh_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/filter_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/point_neuron_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/synaptic_models
> copying bmtk/utils/scripts/pointnet/synaptic_models/ExcToExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/synaptic_models
> copying bmtk/utils/scripts/pointnet/synaptic_models/ExcToInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/synaptic_models
> copying bmtk/utils/scripts/pointnet/synaptic_models/InhToExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/synaptic_models
> copying bmtk/utils/scripts/pointnet/synaptic_models/InhToInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/synaptic_models
> copying bmtk/utils/scripts/pointnet/synaptic_models/instantaneousExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/synaptic_models
> copying bmtk/utils/scripts/pointnet/synaptic_models/instantaneousInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/pointnet/synaptic_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/popnet
> copying bmtk/utils/scripts/popnet/run_popnet.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/popnet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/popnet/population_models
> copying bmtk/utils/scripts/popnet/population_models/exc_model.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/popnet/population_models
> copying bmtk/utils/scripts/popnet/population_models/inh_model.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/popnet/population_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/popnet/synaptic_models
> copying bmtk/utils/scripts/popnet/synaptic_models/ExcToExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/popnet/synaptic_models
> copying bmtk/utils/scripts/popnet/synaptic_models/ExcToInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/popnet/synaptic_models
> copying bmtk/utils/scripts/popnet/synaptic_models/InhToExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/popnet/synaptic_models
> copying bmtk/utils/scripts/popnet/synaptic_models/InhToInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/popnet/synaptic_models
> copying bmtk/utils/scripts/popnet/synaptic_models/input_ExcToExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/popnet/synaptic_models
> copying bmtk/utils/scripts/popnet/synaptic_models/input_ExcToInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/scripts/popnet/synaptic_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core/sonata_schemas
> copying bmtk/simulator/core/sonata_schemas/config_schema.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core/sonata_schemas
> copying bmtk/simulator/bionet/README.md -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/import3d.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/default_templates
> copying bmtk/simulator/bionet/default_templates/BioAxonStub.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/default_templates
> copying bmtk/simulator/bionet/default_templates/Biophys1.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/default_templates
> copying bmtk/simulator/bionet/default_templates/advance.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/default_templates
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/import3d
> copying bmtk/simulator/bionet/import3d/import3d_gui.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/import3d
> copying bmtk/simulator/bionet/import3d/import3d_sec.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/import3d
> copying bmtk/simulator/bionet/import3d/read_morphml.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/import3d
> copying bmtk/simulator/bionet/import3d/read_nlcda.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/import3d
> copying bmtk/simulator/bionet/import3d/read_nlcda3.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/import3d
> copying bmtk/simulator/bionet/import3d/read_nts.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/import3d
> copying bmtk/simulator/bionet/import3d/read_swc.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/import3d
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/schemas
> copying bmtk/simulator/bionet/schemas/config_schema.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/schemas
> copying bmtk/simulator/bionet/schemas/csv_edge_types.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/schemas
> copying bmtk/simulator/bionet/schemas/csv_node_types_external.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/schemas
> copying bmtk/simulator/bionet/schemas/csv_node_types_internal.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/schemas
> copying bmtk/simulator/bionet/schemas/csv_nodes_external.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/schemas
> copying bmtk/simulator/bionet/schemas/csv_nodes_internal.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/bionet/schemas
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel/cell_metrics
> copying bmtk/simulator/filternet/lgnmodel/cell_metrics/sOFF_cell_data.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel/cell_metrics
> copying bmtk/simulator/filternet/lgnmodel/cell_metrics/sON_cell_data.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel/cell_metrics
> copying bmtk/simulator/filternet/lgnmodel/cell_metrics/sus_sus_cells_v3.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel/cell_metrics
> copying bmtk/simulator/filternet/lgnmodel/cell_metrics/tOFF_cell_data.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel/cell_metrics
> copying bmtk/simulator/filternet/lgnmodel/cell_metrics/tON_cell_data.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel/cell_metrics
> copying bmtk/simulator/filternet/lgnmodel/cell_metrics/trans_sus_cells_v3.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel/cell_metrics
> copying bmtk/simulator/core/modules/ndx-aibs-ecephys.extension.yaml -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core/modules
> copying bmtk/simulator/core/modules/ndx-aibs-ecephys.namespace.yaml -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/core/modules
> copying bmtk/utils/sonata/config/config_schema.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata/config
> I: pybuild base:305: /usr/bin/python3 setup.py build
> running build
> running build_py
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk
> copying bmtk/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator
> copying bmtk/simulator/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils
> copying bmtk/utils/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils
> copying bmtk/utils/lazy_property.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils
> copying bmtk/utils/hdf5_helper.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils
> copying bmtk/utils/sim_setup.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> copying bmtk/builder/node.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> copying bmtk/builder/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> copying bmtk/builder/node_pool.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> copying bmtk/builder/builder_utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> copying bmtk/builder/id_generator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> copying bmtk/builder/edge.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> copying bmtk/builder/connector.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> copying bmtk/builder/connection_map.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> copying bmtk/builder/network_builder.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> copying bmtk/builder/iterator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> copying bmtk/builder/index_builders.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> copying bmtk/builder/node_set.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> copying bmtk/builder/functor_cache.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> copying bmtk/builder/networks.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/analyzer
> copying bmtk/analyzer/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/analyzer
> copying bmtk/analyzer/cell_vars.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/analyzer
> copying bmtk/analyzer/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/analyzer
> copying bmtk/analyzer/io_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/analyzer
> copying bmtk/analyzer/spikes_analyzer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/analyzer
> copying bmtk/analyzer/ecp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/analyzer
> copying bmtk/analyzer/spikes_loader.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/analyzer
> copying bmtk/analyzer/firing_rates.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/analyzer
> copying bmtk/analyzer/spike_trains.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/analyzer
> copying bmtk/analyzer/compartment.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/analyzer
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/pointsimulator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/glif_utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/pointnetwork.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/io_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/pyfunction_cache.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/sonata_adaptors.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/nest_utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/gids.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/config.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet
> copying bmtk/simulator/pointnet/property_map.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/io_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/cell_models.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/pyfunction_cache.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/cell.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/transfer_functions.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/filters.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/sonata_adaptors.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/filternetwork.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/filtersimulator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet
> copying bmtk/simulator/filternet/config.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core
> copying bmtk/simulator/core/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core
> copying bmtk/simulator/core/node_population.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core
> copying bmtk/simulator/core/node_sets.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core
> copying bmtk/simulator/core/simulator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core
> copying bmtk/simulator/core/simulation_config_validator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core
> copying bmtk/simulator/core/io_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core
> copying bmtk/simulator/core/pyfunction_cache.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core
> copying bmtk/simulator/core/edge_population.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core
> copying bmtk/simulator/core/simulator_network.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core
> copying bmtk/simulator/core/simulation_config.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core
> copying bmtk/simulator/core/network_reader.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core
> copying bmtk/simulator/core/graph.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/utils
> copying bmtk/simulator/utils/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/utils
> copying bmtk/simulator/utils/simulation_reports.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/utils
> copying bmtk/simulator/utils/simulation_inputs.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/utils
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/popsimulator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/popnode.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/sonata_adaptors.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/popnetwork.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/config.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/popnet
> copying bmtk/simulator/popnet/popedge.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/popnet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/virtualcell.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/biosimulator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/nrn.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/pointprocesscell.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/iclamp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/io_tools.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/pyfunction_cache.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/bionetwork.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/cell.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/nml_reader.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/seclamp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/sonata_adaptors.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/gids.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/pointsomacell.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/config.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/biocell.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/morphology.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet/default_setters
> copying bmtk/simulator/pointnet/default_setters/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet/default_setters
> copying bmtk/simulator/pointnet/default_setters/synaptic_weights.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet/default_setters
> copying bmtk/simulator/pointnet/default_setters/synapse_models.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet/default_setters
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet/modules
> copying bmtk/simulator/pointnet/modules/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet/modules
> copying bmtk/simulator/pointnet/modules/iclamp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet/modules
> copying bmtk/simulator/pointnet/modules/ecephys_module.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet/modules
> copying bmtk/simulator/pointnet/modules/record_spikes.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet/modules
> copying bmtk/simulator/pointnet/modules/multimeter_reporter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/pointnet/modules
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/default_setters
> copying bmtk/simulator/filternet/default_setters/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/default_setters
> copying bmtk/simulator/filternet/default_setters/cell_loaders.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/default_setters
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/poissongeneration.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/kernel.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/transferfunction.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/fitfuns.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/cellmodel.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/util_fns.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/singleunitcell.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/cursor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/linearfilter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/lnunit.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/spatialfilter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/gaborfilter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/lgnmodel1.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/movie.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/make_cell_list.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/temporalfilter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/cellmetrics.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/utilities.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> copying bmtk/simulator/filternet/lgnmodel/lattice_unit_constructor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/modules
> copying bmtk/simulator/filternet/modules/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/modules
> copying bmtk/simulator/filternet/modules/base.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/modules
> copying bmtk/simulator/filternet/modules/create_spikes.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/modules
> copying bmtk/simulator/filternet/modules/record_rates.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/modules
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core/sonata_reader
> copying bmtk/simulator/core/sonata_reader/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core/sonata_reader
> copying bmtk/simulator/core/sonata_reader/edge_adaptor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core/sonata_reader
> copying bmtk/simulator/core/sonata_reader/node_adaptor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core/sonata_reader
> copying bmtk/simulator/core/sonata_reader/network_reader.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core/sonata_reader
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core/modules
> copying bmtk/simulator/core/modules/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core/modules
> copying bmtk/simulator/core/modules/iclamp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core/modules
> copying bmtk/simulator/core/modules/simulator_module.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core/modules
> copying bmtk/simulator/core/modules/ecephys_module.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core/modules
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/default_setters
> copying bmtk/simulator/bionet/default_setters/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/default_setters
> copying bmtk/simulator/bionet/default_setters/synaptic_weights.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/default_setters
> copying bmtk/simulator/bionet/default_setters/cell_models.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/default_setters
> copying bmtk/simulator/bionet/default_setters/synapse_models.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/default_setters
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/comsol.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/iclamp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/record_netcons.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/save_synapses.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/xstim_waveforms.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/xstim.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/ecp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/ecephys_module.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/record_cellvars.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/record_spikes.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/sim_module.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules
> copying bmtk/simulator/bionet/modules/record_clamp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/compile_mechanisms
> copying bmtk/utils/compile_mechanisms/compile_mechanisms.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/compile_mechanisms
> copying bmtk/utils/compile_mechanisms/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/compile_mechanisms
> copying bmtk/utils/compile_mechanisms/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/compile_mechanisms
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports
> copying bmtk/utils/reports/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports
> copying bmtk/utils/reports/current_writer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/population.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/group.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/node.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/column_property.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/edge.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/types_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/file_root.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata
> copying bmtk/utils/sonata/file.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/io
> copying bmtk/utils/io/cell_vars.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/io
> copying bmtk/utils/io/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/io
> copying bmtk/utils/io/firing_rates.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/io
> copying bmtk/utils/io/ioutils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/io
> copying bmtk/utils/io/spike_trains.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/io
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/create_environment
> copying bmtk/utils/create_environment/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/create_environment
> copying bmtk/utils/create_environment/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/create_environment
> copying bmtk/utils/create_environment/env_builder.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/create_environment
> copying bmtk/utils/create_environment/create_environment.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/create_environment
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/compartment
> copying bmtk/utils/reports/compartment/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/compartment
> copying bmtk/utils/reports/compartment/compartment_report.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/compartment
> copying bmtk/utils/reports/compartment/compartment_writer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/compartment
> copying bmtk/utils/reports/compartment/compartment_reader.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/compartment
> copying bmtk/utils/reports/compartment/core.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/compartment
> copying bmtk/utils/reports/compartment/plotting.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/compartment
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/spike_trains_api.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/stats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/spike_train_buffer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/spikes_file_writers.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/core.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/spike_train_readers.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/spike_trains.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/spike_trains
> copying bmtk/utils/reports/spike_trains/plotting.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/reports/spike_trains
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata/config
> copying bmtk/utils/sonata/config/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata/config
> copying bmtk/utils/sonata/config/sonata_config.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata/config
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/network_adaptors
> copying bmtk/builder/network_adaptors/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/network_adaptors
> copying bmtk/builder/network_adaptors/edges_collator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/network_adaptors
> copying bmtk/builder/network_adaptors/dm_network.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/network_adaptors
> copying bmtk/builder/network_adaptors/dm_network_orig.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/network_adaptors
> copying bmtk/builder/network_adaptors/nxnetwork.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/network_adaptors
> copying bmtk/builder/network_adaptors/edge_props_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/network_adaptors
> copying bmtk/builder/network_adaptors/network.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/network_adaptors
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/edges_sorter
> copying bmtk/builder/edges_sorter/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/edges_sorter
> copying bmtk/builder/edges_sorter/memory_sorter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/edges_sorter
> copying bmtk/builder/edges_sorter/merge_sorter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/edges_sorter
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/auxi
> copying bmtk/builder/auxi/edge_connectors.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/auxi
> copying bmtk/builder/auxi/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/auxi
> copying bmtk/builder/auxi/node_params.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/auxi
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/bionet
> copying bmtk/builder/bionet/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/bionet
> copying bmtk/builder/bionet/swc_reader.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/builder/bionet
> running egg_info
> writing bmtk.egg-info/PKG-INFO
> writing dependency_links to bmtk.egg-info/dependency_links.txt
> writing requirements to bmtk.egg-info/requires.txt
> writing top-level names to bmtk.egg-info/top_level.txt
> reading manifest file 'bmtk.egg-info/SOURCES.txt'
> reading manifest template 'MANIFEST.in'
> warning: no files found matching '*.txt' under directory 'bmtk'
> warning: no files found matching '*.cfg' under directory 'bmtk'
> adding license file 'LICENSE.txt'
> writing manifest file 'bmtk.egg-info/SOURCES.txt'
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.simulator.bionet.default_templates' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.simulator.bionet.default_templates' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.simulator.bionet.default_templates' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.simulator.bionet.default_templates' to be distributed and are
> already explicitly excluding 'bmtk.simulator.bionet.default_templates' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.simulator.bionet.import3d' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.simulator.bionet.import3d' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.simulator.bionet.import3d' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.simulator.bionet.import3d' to be distributed and are
> already explicitly excluding 'bmtk.simulator.bionet.import3d' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.simulator.bionet.schemas' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.simulator.bionet.schemas' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.simulator.bionet.schemas' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.simulator.bionet.schemas' to be distributed and are
> already explicitly excluding 'bmtk.simulator.bionet.schemas' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.simulator.core.sonata_schemas' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.simulator.core.sonata_schemas' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.simulator.core.sonata_schemas' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.simulator.core.sonata_schemas' to be distributed and are
> already explicitly excluding 'bmtk.simulator.core.sonata_schemas' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.simulator.filternet.lgnmodel.cell_metrics' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.simulator.filternet.lgnmodel.cell_metrics' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.simulator.filternet.lgnmodel.cell_metrics' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.simulator.filternet.lgnmodel.cell_metrics' to be distributed and are
> already explicitly excluding 'bmtk.simulator.filternet.lgnmodel.cell_metrics' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet.biophysical_neuron_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet.biophysical_neuron_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet.biophysical_neuron_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet.biophysical_neuron_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet.biophysical_neuron_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet.filter_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet.filter_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet.filter_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet.filter_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet.filter_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet.mechanisms.modfiles' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet.mechanisms.modfiles' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet.mechanisms.modfiles' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet.mechanisms.modfiles' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet.mechanisms.modfiles' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet.morphologies' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet.morphologies' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet.morphologies' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet.morphologies' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet.morphologies' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet.point_neuron_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet.point_neuron_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet.point_neuron_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet.point_neuron_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet.point_neuron_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet.synaptic_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet.synaptic_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet.synaptic_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet.synaptic_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet.synaptic_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.bionet.templates' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.bionet.templates' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.bionet.templates' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.bionet.templates' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.bionet.templates' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.filternet' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.filternet' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.filternet' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.filternet' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.filternet' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.filternet.filter_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.filternet.filter_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.filternet.filter_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.filternet.filter_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.filternet.filter_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.pointnet' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.pointnet' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.pointnet' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.pointnet' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.pointnet' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.pointnet.filter_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.pointnet.filter_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.pointnet.filter_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.pointnet.filter_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.pointnet.filter_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.pointnet.point_neuron_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.pointnet.point_neuron_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.pointnet.point_neuron_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.pointnet.point_neuron_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.pointnet.point_neuron_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.pointnet.synaptic_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.pointnet.synaptic_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.pointnet.synaptic_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.pointnet.synaptic_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.pointnet.synaptic_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.popnet' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.popnet' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.popnet' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.popnet' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.popnet' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.popnet.population_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.popnet.population_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.popnet.population_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.popnet.population_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.popnet.population_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bmtk.utils.scripts.popnet.synaptic_models' is absent from the `packages` configuration.
> !!
>
> ********************************************************************************
> ############################
> # Package would be ignored #
> ############################
> Python recognizes 'bmtk.utils.scripts.popnet.synaptic_models' as an importable package[^1],
> but it is absent from setuptools' `packages` configuration.
>
> This leads to an ambiguous overall configuration. If you want to distribute this
> package, please make sure that 'bmtk.utils.scripts.popnet.synaptic_models' is explicitly added
> to the `packages` configuration field.
>
> Alternatively, you can also rely on setuptools' discovery methods
> (for example by using `find_namespace_packages(...)`/`find_namespace:`
> instead of `find_packages(...)`/`find:`).
>
> You can read more about "package discovery" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
>
> If you don't want 'bmtk.utils.scripts.popnet.synaptic_models' to be distributed and are
> already explicitly excluding 'bmtk.utils.scripts.popnet.synaptic_models' via
> `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
> you can try to use `exclude_package_data`, or `include-package-data=False` in
> combination with a more fine grained `package-data` configuration.
>
> You can read more about "package data files" on setuptools documentation page:
>
> - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
>
>
> [^1]: For Python, any directory (with suitable naming) can be imported,
> even if it does not contain any `.py` files.
> On the other hand, currently there is no concept of package data
> directory, all directories are treated like packages.
> ********************************************************************************
>
> !!
> check.warn(importable)
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts
> copying bmtk/utils/scripts/sonata.circuit_config.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts
> copying bmtk/utils/scripts/sonata.simulation_config.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet
> copying bmtk/utils/scripts/bionet/default_config.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet
> copying bmtk/utils/scripts/bionet/run_bionet.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> copying bmtk/utils/scripts/bionet/biophysical_neuron_models/318331342_fit.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> copying bmtk/utils/scripts/bionet/biophysical_neuron_models/472363762_fit.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> copying bmtk/utils/scripts/bionet/biophysical_neuron_models/472912177_fit.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> copying bmtk/utils/scripts/bionet/biophysical_neuron_models/473862421_fit.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> copying bmtk/utils/scripts/bionet/biophysical_neuron_models/473863035_fit.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> copying bmtk/utils/scripts/bionet/biophysical_neuron_models/473863510_fit.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> copying bmtk/utils/scripts/bionet/biophysical_neuron_models/485184849_fit.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/biophysical_neuron_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sOFF_TF1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sOFF_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sOFF_TF2.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sOFF_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sOFF_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sON_TF1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sON_TF2.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sON_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/sON_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/tOFF_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/tOFF_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/tOFF_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/tON_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/tON_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/tON_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> copying bmtk/utils/scripts/bionet/filter_models/tON_TF8_demo.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/filter_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/CaDynamics.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Ca_HVA.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Ca_LVA.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Ih.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Im.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Im_v2.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/K_P.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/K_T.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Kd.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Kv2like.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Kv3_1.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/NaTa.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/NaTs.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/NaV.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/Nap.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/SK.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> copying bmtk/utils/scripts/bionet/mechanisms/modfiles/vecevent.mod -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/mechanisms/modfiles
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/morphologies
> copying bmtk/utils/scripts/bionet/morphologies/Nr5a1_471087815_m.swc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/morphologies
> copying bmtk/utils/scripts/bionet/morphologies/Pvalb_469628681_m.swc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/morphologies
> copying bmtk/utils/scripts/bionet/morphologies/Pvalb_470522102_m.swc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/morphologies
> copying bmtk/utils/scripts/bionet/morphologies/Rorb_325404214_m.swc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/morphologies
> copying bmtk/utils/scripts/bionet/morphologies/Scnn1a_473845048_m.swc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/morphologies
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/point_neuron_models
> copying bmtk/utils/scripts/bionet/point_neuron_models/IntFire1_exc_1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/point_neuron_models
> copying bmtk/utils/scripts/bionet/point_neuron_models/IntFire1_inh_1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/point_neuron_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/synaptic_models
> copying bmtk/utils/scripts/bionet/synaptic_models/AMPA_ExcToExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/synaptic_models
> copying bmtk/utils/scripts/bionet/synaptic_models/AMPA_ExcToInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/synaptic_models
> copying bmtk/utils/scripts/bionet/synaptic_models/GABA_InhToExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/synaptic_models
> copying bmtk/utils/scripts/bionet/synaptic_models/GABA_InhToInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/synaptic_models
> copying bmtk/utils/scripts/bionet/synaptic_models/instantaneousExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/synaptic_models
> copying bmtk/utils/scripts/bionet/synaptic_models/instantaneousInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/synaptic_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/templates
> copying bmtk/utils/scripts/bionet/templates/BioAllen_old.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/templates
> copying bmtk/utils/scripts/bionet/templates/BioAxonStub.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/templates
> copying bmtk/utils/scripts/bionet/templates/Biophys1.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/bionet/templates
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet
> copying bmtk/utils/scripts/filternet/run_filternet.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sOFF_TF1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sOFF_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sOFF_TF2.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sOFF_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sOFF_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sON_TF1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sON_TF2.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sON_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/sON_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/tOFF_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/tOFF_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/tOFF_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/tON_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/tON_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/tON_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> copying bmtk/utils/scripts/filternet/filter_models/tON_TF8_demo.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/filternet/filter_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet
> copying bmtk/utils/scripts/pointnet/run_pointnet.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sOFF_TF1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sOFF_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sOFF_TF2.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sOFF_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sOFF_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sON_TF1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sON_TF2.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sON_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/sON_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/tOFF_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/tOFF_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/tOFF_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/tON_TF15.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/tON_TF4.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/tON_TF8.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> copying bmtk/utils/scripts/pointnet/filter_models/tON_TF8_demo.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/filter_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/472363762_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/472912177_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/473862421_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/473863035_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/473863510_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/IntFire1_exc_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/IntFire1_inh_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/point_neuron_models
> copying bmtk/utils/scripts/pointnet/point_neuron_models/filter_point.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/point_neuron_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/synaptic_models
> copying bmtk/utils/scripts/pointnet/synaptic_models/ExcToExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/synaptic_models
> copying bmtk/utils/scripts/pointnet/synaptic_models/ExcToInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/synaptic_models
> copying bmtk/utils/scripts/pointnet/synaptic_models/InhToExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/synaptic_models
> copying bmtk/utils/scripts/pointnet/synaptic_models/InhToInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/synaptic_models
> copying bmtk/utils/scripts/pointnet/synaptic_models/instantaneousExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/synaptic_models
> copying bmtk/utils/scripts/pointnet/synaptic_models/instantaneousInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/pointnet/synaptic_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/popnet
> copying bmtk/utils/scripts/popnet/run_popnet.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/popnet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/popnet/population_models
> copying bmtk/utils/scripts/popnet/population_models/exc_model.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/popnet/population_models
> copying bmtk/utils/scripts/popnet/population_models/inh_model.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/popnet/population_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/popnet/synaptic_models
> copying bmtk/utils/scripts/popnet/synaptic_models/ExcToExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/popnet/synaptic_models
> copying bmtk/utils/scripts/popnet/synaptic_models/ExcToInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/popnet/synaptic_models
> copying bmtk/utils/scripts/popnet/synaptic_models/InhToExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/popnet/synaptic_models
> copying bmtk/utils/scripts/popnet/synaptic_models/InhToInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/popnet/synaptic_models
> copying bmtk/utils/scripts/popnet/synaptic_models/input_ExcToExc.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/popnet/synaptic_models
> copying bmtk/utils/scripts/popnet/synaptic_models/input_ExcToInh.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/scripts/popnet/synaptic_models
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core/sonata_schemas
> copying bmtk/simulator/core/sonata_schemas/config_schema.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core/sonata_schemas
> copying bmtk/simulator/bionet/README.md -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> copying bmtk/simulator/bionet/import3d.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/default_templates
> copying bmtk/simulator/bionet/default_templates/BioAxonStub.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/default_templates
> copying bmtk/simulator/bionet/default_templates/Biophys1.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/default_templates
> copying bmtk/simulator/bionet/default_templates/advance.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/default_templates
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/import3d
> copying bmtk/simulator/bionet/import3d/import3d_gui.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/import3d
> copying bmtk/simulator/bionet/import3d/import3d_sec.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/import3d
> copying bmtk/simulator/bionet/import3d/read_morphml.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/import3d
> copying bmtk/simulator/bionet/import3d/read_nlcda.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/import3d
> copying bmtk/simulator/bionet/import3d/read_nlcda3.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/import3d
> copying bmtk/simulator/bionet/import3d/read_nts.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/import3d
> copying bmtk/simulator/bionet/import3d/read_swc.hoc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/import3d
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/schemas
> copying bmtk/simulator/bionet/schemas/config_schema.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/schemas
> copying bmtk/simulator/bionet/schemas/csv_edge_types.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/schemas
> copying bmtk/simulator/bionet/schemas/csv_node_types_external.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/schemas
> copying bmtk/simulator/bionet/schemas/csv_node_types_internal.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/schemas
> copying bmtk/simulator/bionet/schemas/csv_nodes_external.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/schemas
> copying bmtk/simulator/bionet/schemas/csv_nodes_internal.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/schemas
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel/cell_metrics
> copying bmtk/simulator/filternet/lgnmodel/cell_metrics/sOFF_cell_data.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel/cell_metrics
> copying bmtk/simulator/filternet/lgnmodel/cell_metrics/sON_cell_data.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel/cell_metrics
> copying bmtk/simulator/filternet/lgnmodel/cell_metrics/sus_sus_cells_v3.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel/cell_metrics
> copying bmtk/simulator/filternet/lgnmodel/cell_metrics/tOFF_cell_data.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel/cell_metrics
> copying bmtk/simulator/filternet/lgnmodel/cell_metrics/tON_cell_data.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel/cell_metrics
> copying bmtk/simulator/filternet/lgnmodel/cell_metrics/trans_sus_cells_v3.csv -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel/cell_metrics
> copying bmtk/simulator/core/modules/ndx-aibs-ecephys.extension.yaml -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core/modules
> copying bmtk/simulator/core/modules/ndx-aibs-ecephys.namespace.yaml -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/core/modules
> copying bmtk/utils/sonata/config/config_schema.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata/config
> sphinx-apidoc -f -o docs/autodocs/source/bmtk/ bmtk
> PYTHONPATH=. python3 -m sphinx -N -bhtml docs/autodocs/source/ build/html # HTML generator
> Running Sphinx v7.2.6
> making output directory... done
> WARNING: html_static_path entry '/usr/share/javascript/requirejs/require.min.js' does not exist
> [autosummary] generating autosummary for: ad_tutorials.rst, analyzer.rst, bionet.rst, bionet_config.rst, bionet_tutorial.rst, bmtk/bmtk.analyzer.rst, bmtk/bmtk.builder.auxi.rst, bmtk/bmtk.builder.bionet.rst, bmtk/bmtk.builder.edges_sorter.rst, bmtk/bmtk.builder.network_adaptors.rst, ..., tutorial_filter_models.ipynb, tutorial_multi_pop.ipynb, tutorial_pointnet_modeling.ipynb, tutorial_population_modeling.ipynb, tutorial_single_cell_clamped.ipynb, tutorial_single_cell_syn.ipynb, tutorial_single_pop.ipynb, tutorial_spike_trains_refractory.ipynb, tutorials.rst, workshop.rst
> Matplotlib created a temporary config/cache directory at /tmp/matplotlib-nd94c_h2 because the default path (/sbuild-nonexistent/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
> numprocs=1
> WARNING: Failed to import bmtk.simulator.popnet.config.
> Possible hints:
> * ModuleNotFoundError: No module named 'dipde'
> * AttributeError: module 'bmtk.simulator' has no attribute 'popnet'
> WARNING: Failed to import bmtk.simulator.popnet.popedge.
> Possible hints:
> * ModuleNotFoundError: No module named 'dipde'
> * AttributeError: module 'bmtk.simulator' has no attribute 'popnet'
> WARNING: Failed to import bmtk.simulator.popnet.popnetwork.
> Possible hints:
> * ModuleNotFoundError: No module named 'dipde'
> * AttributeError: module 'bmtk.simulator' has no attribute 'popnet'
> WARNING: Failed to import bmtk.simulator.popnet.popnode.
> Possible hints:
> * ModuleNotFoundError: No module named 'dipde'
> * AttributeError: module 'bmtk.simulator' has no attribute 'popnet'
> WARNING: Failed to import bmtk.simulator.popnet.popsimulator.
> Possible hints:
> * ModuleNotFoundError: No module named 'dipde'
> * AttributeError: module 'bmtk.simulator' has no attribute 'popnet'
> WARNING: Failed to import bmtk.simulator.popnet.
> Possible hints:
> * ModuleNotFoundError: No module named 'dipde'
> * AttributeError: module 'bmtk.simulator' has no attribute 'popnet'
> NEURON mechanisms not found in /<<PKGBUILDDIR>>/bmtk/tests/simulator/bionet/components/mechanisms.
> NEURON mechanisms not found in components/mechanisms.
> building [mo]: targets for 0 po files that are out of date
> writing output...
> building [html]: targets for 71 source files that are out of date
> updating environment: [new config] 71 added, 0 changed, 0 removed
> [2Kreading sources... [ 1%] ad_tutorials
> [2Kreading sources... [ 3%] analyzer
> [2Kreading sources... [ 4%] bionet
> [2Kreading sources... [ 6%] bionet_config
> [2Kreading sources... [ 7%] bionet_tutorial
> [2Kreading sources... [ 8%] bmtk/bmtk
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> [2Kreading sources... [ 25%] bmtk/bmtk.simulator.core.modules
> /usr/lib/python3/dist-packages/numpydoc/docscrape.py:455: UserWarning: Unknown section Input Parameters: in the docstring of IClampMod in /<<PKGBUILDDIR>>/bmtk/simulator/core/modules/iclamp.py.
> warn(msg)
> [2Kreading sources... [ 27%] bmtk/bmtk.simulator.core.sonata_reader
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> [2Kreading sources... [ 30%] bmtk/bmtk.simulator.filternet.default_setters
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> [2Kreading sources... [ 37%] bmtk/bmtk.simulator.pointnet.modules
> [2Kreading sources... [ 38%] bmtk/bmtk.simulator.popnet
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> [2Kreading sources... [ 44%] bmtk/bmtk.tests.simulator.bionet
> [2Kreading sources... [ 45%] bmtk/bmtk.tests.simulator.pointnet
> [2Kreading sources... [ 46%] bmtk/bmtk.tests.simulator.popnet
> [2Kreading sources... [ 48%] bmtk/bmtk.utils
> [2Kreading sources... [ 49%] bmtk/bmtk.utils.compile_mechanisms
> [2Kreading sources... [ 51%] bmtk/bmtk.utils.create_environment
> [2Kreading sources... [ 52%] bmtk/bmtk.utils.io
> [2Kreading sources... [ 54%] bmtk/bmtk.utils.reports
> [2Kreading sources... [ 55%] bmtk/bmtk.utils.reports.compartment
> [2Kreading sources... [ 56%] bmtk/bmtk.utils.reports.spike_trains
> [2Kreading sources... [ 58%] bmtk/bmtk.utils.sonata
> [2Kreading sources... [ 59%] bmtk/bmtk.utils.sonata.config
> [2Kreading sources... [ 61%] bmtk/modules
> [2Kreading sources... [ 62%] builder
> [2Kreading sources... [ 63%] contributors
> [2Kreading sources... [ 65%] current_clamps
> [2Kreading sources... [ 66%] ecephys_probe
> [2Kreading sources... [ 68%] examples
> [2Kreading sources... [ 69%] filternet
> [2Kreading sources... [ 70%] how_to_cite
> [2Kreading sources... [ 72%] index
> [2Kreading sources... [ 73%] installation
> [2Kreading sources... [ 75%] network_file_formats
> [2Kreading sources... [ 76%] pointnet
> [2Kreading sources... [ 77%] popnet
> [2Kreading sources... [ 79%] registration
> [2Kreading sources... [ 80%] simulators
> [2Kreading sources... [ 82%] tutorial_NetworkBuilder_Intro
> /usr/lib/python3/dist-packages/nbsphinx.py:1505: RuntimeWarning: You are using an unsupported version of pandoc (3.1.3).
> Your version must be at least (1.12.1) but less than (3.0.0).
> Refer to https://pandoc.org/installing.html.
> Continuing with doubts...
> nbconvert.utils.pandoc.check_pandoc_version()
> [2Kreading sources... [ 83%] tutorial_bionet_disconnected_sims
> [2Kreading sources... [ 85%] tutorial_cell_placement
> [2Kreading sources... [ 86%] tutorial_dynamic_synapses
> [2Kreading sources... [ 87%] tutorial_filter_models
> [2Kreading sources... [ 89%] tutorial_multi_pop
> [2Kreading sources... [ 90%] tutorial_pointnet_modeling
> [2Kreading sources... [ 92%] tutorial_population_modeling
> [2Kreading sources... [ 93%] tutorial_single_cell_clamped
> [2Kreading sources... [ 94%] tutorial_single_cell_syn
> [2Kreading sources... [ 96%] tutorial_single_pop
> [2Kreading sources... [ 97%] tutorial_spike_trains_refractory
> [2Kreading sources... [ 99%] tutorials
> [2Kreading sources... [100%] workshop
>
> /<<PKGBUILDDIR>>/docs/autodocs/source/bionet.rst:2: WARNING: Duplicate explicit target name: "documentation".
> /<<PKGBUILDDIR>>/bmtk/simulator/bionet/modules/comsol.py:docstring of bmtk.simulator.bionet.modules.comsol.ComsolMod:5: ERROR: Unexpected indentation.
> WARNING: autodoc: failed to import module 'popnet.config' from module 'bmtk.simulator'; the following exception was raised:
> No module named 'dipde'
> WARNING: autodoc: failed to import module 'popnet.popedge' from module 'bmtk.simulator'; the following exception was raised:
> No module named 'dipde'
> WARNING: autodoc: failed to import module 'popnet.popnetwork' from module 'bmtk.simulator'; the following exception was raised:
> No module named 'dipde'
> WARNING: autodoc: failed to import module 'popnet.popnode' from module 'bmtk.simulator'; the following exception was raised:
> No module named 'dipde'
> WARNING: autodoc: failed to import module 'popnet.popsimulator' from module 'bmtk.simulator'; the following exception was raised:
> No module named 'dipde'
> WARNING: autodoc: failed to import module 'popnet' from module 'bmtk.simulator'; the following exception was raised:
> No module named 'dipde'
> /<<PKGBUILDDIR>>/docs/autodocs/source/how_to_cite.rst:32: WARNING: Line block ends without a blank line.
> /<<PKGBUILDDIR>>/docs/autodocs/source/index.rst:8: WARNING: Duplicate explicit target name: "link".
> /<<PKGBUILDDIR>>/docs/autodocs/source/installation.rst:2: WARNING: Duplicate explicit target name: "here".
> /<<PKGBUILDDIR>>/docs/autodocs/source/pointnet.rst:2: WARNING: Duplicate explicit target name: "documentation".
> looking for now-outdated files... none found
> pickling environment... done
> checking consistency... /<<PKGBUILDDIR>>/docs/autodocs/source/bmtk/modules.rst: WARNING: document isn't included in any toctree
> done
> preparing documents... done
> copying assets... [2Kcopying downloadable files... [100%] ../../_static/2022-07-Allen-Institute-Software-Modeling-Workshop.pdf
>
> copying static files... done
> copying extra files... done
> done
> [2Kwriting output... [ 1%] ad_tutorials
> [2Kwriting output... [ 3%] analyzer
> [2Kwriting output... [ 4%] bionet
> [2Kwriting output... [ 6%] bionet_config
> [2Kwriting output... [ 7%] bionet_tutorial
> [2Kwriting output... [ 8%] bmtk/bmtk
> [2Kwriting output... [ 10%] bmtk/bmtk.analyzer
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> [2Kwriting output... [ 13%] bmtk/bmtk.builder.auxi
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> [2Kwriting output... [ 15%] bmtk/bmtk.builder.edges_sorter
> [2Kwriting output... [ 17%] bmtk/bmtk.builder.network_adaptors
> [2Kwriting output... [ 18%] bmtk/bmtk.simulator
> [2Kwriting output... [ 20%] bmtk/bmtk.simulator.bionet
> [2Kwriting output... [ 21%] bmtk/bmtk.simulator.bionet.default_setters
> [2Kwriting output... [ 23%] bmtk/bmtk.simulator.bionet.modules
> [2Kwriting output... [ 24%] bmtk/bmtk.simulator.core
> [2Kwriting output... [ 25%] bmtk/bmtk.simulator.core.modules
> [2Kwriting output... [ 27%] bmtk/bmtk.simulator.core.sonata_reader
> [2Kwriting output... [ 28%] bmtk/bmtk.simulator.filternet
> [2Kwriting output... [ 30%] bmtk/bmtk.simulator.filternet.default_setters
> [2Kwriting output... [ 31%] bmtk/bmtk.simulator.filternet.lgnmodel
> [2Kwriting output... [ 32%] bmtk/bmtk.simulator.filternet.modules
> [2Kwriting output... [ 34%] bmtk/bmtk.simulator.pointnet
> [2Kwriting output... [ 35%] bmtk/bmtk.simulator.pointnet.default_setters
> [2Kwriting output... [ 37%] bmtk/bmtk.simulator.pointnet.modules
> [2Kwriting output... [ 38%] bmtk/bmtk.simulator.popnet
> [2Kwriting output... [ 39%] bmtk/bmtk.simulator.utils
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> [2Kwriting output... [ 45%] bmtk/bmtk.tests.simulator.pointnet
> [2Kwriting output... [ 46%] bmtk/bmtk.tests.simulator.popnet
> [2Kwriting output... [ 48%] bmtk/bmtk.utils
> [2Kwriting output... [ 49%] bmtk/bmtk.utils.compile_mechanisms
> [2Kwriting output... [ 51%] bmtk/bmtk.utils.create_environment
> [2Kwriting output... [ 52%] bmtk/bmtk.utils.io
> [2Kwriting output... [ 54%] bmtk/bmtk.utils.reports
> [2Kwriting output... [ 55%] bmtk/bmtk.utils.reports.compartment
> [2Kwriting output... [ 56%] bmtk/bmtk.utils.reports.spike_trains
> [2Kwriting output... [ 58%] bmtk/bmtk.utils.sonata
> [2Kwriting output... [ 59%] bmtk/bmtk.utils.sonata.config
> [2Kwriting output... [ 61%] bmtk/modules
> [2Kwriting output... [ 62%] builder
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> [2Kwriting output... [ 66%] ecephys_probe
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> [2Kwriting output... [ 69%] filternet
> [2Kwriting output... [ 70%] how_to_cite
> [2Kwriting output... [ 72%] index
> [2Kwriting output... [ 73%] installation
> [2Kwriting output... [ 75%] network_file_formats
> [2Kwriting output... [ 76%] pointnet
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> [2Kwriting output... [ 79%] registration
> [2Kwriting output... [ 80%] simulators
> [2Kwriting output... [ 82%] tutorial_NetworkBuilder_Intro
> [2Kwriting output... [ 83%] tutorial_bionet_disconnected_sims
> [2Kwriting output... [ 85%] tutorial_cell_placement
> [2Kwriting output... [ 86%] tutorial_dynamic_synapses
> [2Kwriting output... [ 87%] tutorial_filter_models
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> [2Kwriting output... [ 90%] tutorial_pointnet_modeling
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> [2Kwriting output... [ 99%] tutorials
> [2Kwriting output... [100%] workshop
>
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_NetworkBuilder_Intro.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_NetworkBuilder_Intro.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_NetworkBuilder_Intro.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_NetworkBuilder_Intro.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_NetworkBuilder_Intro.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_NetworkBuilder_Intro.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_NetworkBuilder_Intro.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_NetworkBuilder_Intro.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_NetworkBuilder_Intro.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_NetworkBuilder_Intro.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:923: WARNING: Lexing literal_block '{\n "inputs": {\n "replay_edges_1": {\n "input_type": "replay_spikes",\n "module": "replay",\n ...\n }\n "replay_edges_2": {\n "input_type": "replay_spikes",\n "module": "replay",\n ...\n }\n }\n}' as "json" resulted in an error at token: '.'. Retrying in relaxed mode.
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_bionet_disconnected_sims.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_cell_placement.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_cell_placement.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_cell_placement.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_cell_placement.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_cell_placement.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_cell_placement.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
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> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_cell_placement.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_cell_placement.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
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> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_cell_placement.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_cell_placement.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
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> /<<PKGBUILDDIR>>/docs/autodocs/source/tutorial_dynamic_synapses.ipynb:: WARNING: Pygments lexer name 'ipython3' is not known
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> generating indices... genindex py-modindex done
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>
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>
> dumping search index in English (code: en)... done
> dumping object inventory... done
> build succeeded, 165 warnings.
>
> The HTML pages are in build/html.
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
> dh_auto_test -O--buildsystem=pybuild
> I: pybuild base:305: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build; python3.12 -m pytest /<<PKGBUILDDIR>>/bmtk/tests/
> ============================= test session starts ==============================
> platform linux -- Python 3.12.2, pytest-8.1.1, pluggy-1.4.0
> rootdir: /<<PKGBUILDDIR>>
> collected 319 items / 3 errors / 1 skipped
>
> ==================================== ERRORS ====================================
> _________________ ERROR collecting bmtk/tests/simulator/bionet _________________
> /usr/lib/python3.12/importlib/__init__.py:90: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> <frozen importlib._bootstrap>:1387: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1360: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
> ???
> <frozen importlib._bootstrap>:488: in _call_with_frames_removed
> ???
> <frozen importlib._bootstrap>:1387: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1360: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
> ???
> <frozen importlib._bootstrap>:488: in _call_with_frames_removed
> ???
> <frozen importlib._bootstrap>:1387: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1360: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
> ???
> <frozen importlib._bootstrap>:488: in _call_with_frames_removed
> ???
> <frozen importlib._bootstrap>:1387: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1360: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1324: in _find_and_load_unlocked
> ???
> E ModuleNotFoundError: No module named 'bmtk.tests'
> ________________ ERROR collecting bmtk/tests/simulator/pointnet ________________
> /usr/lib/python3.12/importlib/__init__.py:90: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> <frozen importlib._bootstrap>:1387: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1360: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
> ???
> <frozen importlib._bootstrap>:488: in _call_with_frames_removed
> ???
> <frozen importlib._bootstrap>:1387: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1360: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
> ???
> <frozen importlib._bootstrap>:488: in _call_with_frames_removed
> ???
> <frozen importlib._bootstrap>:1387: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1360: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1310: in _find_and_load_unlocked
> ???
> <frozen importlib._bootstrap>:488: in _call_with_frames_removed
> ???
> <frozen importlib._bootstrap>:1387: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1360: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1324: in _find_and_load_unlocked
> ???
> E ModuleNotFoundError: No module named 'bmtk.tests'
> ________ ERROR collecting bmtk/tests/simulator/popnet/test_popgraph.py _________
> ImportError while importing test module '/<<PKGBUILDDIR>>/bmtk/tests/simulator/popnet/test_popgraph.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.12/importlib/__init__.py:90: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> E ModuleNotFoundError: No module named 'bmtk.tests'
> =============================== warnings summary ===============================
> ../../../../../../usr/lib/python3/dist-packages/dateutil/tz/tz.py:37
> /usr/lib/python3/dist-packages/dateutil/tz/tz.py:37: DeprecationWarning: datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.fromtimestamp(timestamp, datetime.UTC).
> EPOCH = datetime.datetime.utcfromtimestamp(0)
>
> bmtk/utils/sonata/config/sonata_config.py:400
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/utils/sonata/config/sonata_config.py:400: SyntaxWarning: invalid escape sequence '\$'
> variables = [m for m in re.finditer('\$\{?[\w]+\}?', json_str)]
>
> bmtk/simulator/filternet/lgnmodel/util_fns.py:51
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build/bmtk/simulator/filternet/lgnmodel/util_fns.py:51: SyntaxWarning: invalid escape sequence '\D'
> gr_fnames_ord = sorted(gr_fnames, key=lambda x: (int(re.sub('\D', '', x)), x))
>
> -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
> =========================== short test summary info ============================
> ERROR ../../../bmtk/tests/simulator/bionet - ModuleNotFoundError: No module n...
> ERROR ../../../bmtk/tests/simulator/pointnet - ModuleNotFoundError: No module...
> ERROR ../../../bmtk/tests/simulator/popnet/test_popgraph.py
> !!!!!!!!!!!!!!!!!!! Interrupted: 3 errors during collection !!!!!!!!!!!!!!!!!!!!
> =================== 1 skipped, 3 warnings, 3 errors in 3.82s ===================
> E: pybuild pybuild:389: test: plugin distutils failed with: exit code=2: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12/build; python3.12 -m pytest {dir}/bmtk/tests/
> I: pybuild base:305: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build; python3.11 -m pytest /<<PKGBUILDDIR>>/bmtk/tests/
> ============================= test session starts ==============================
> platform linux -- Python 3.11.8, pytest-8.1.1, pluggy-1.4.0
> rootdir: /<<PKGBUILDDIR>>
> collected 320 items / 3 errors
>
> ==================================== ERRORS ====================================
> _________________ ERROR collecting bmtk/tests/simulator/bionet _________________
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> <frozen importlib._bootstrap>:1204: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1176: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1126: in _find_and_load_unlocked
> ???
> <frozen importlib._bootstrap>:241: in _call_with_frames_removed
> ???
> <frozen importlib._bootstrap>:1204: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1176: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1126: in _find_and_load_unlocked
> ???
> <frozen importlib._bootstrap>:241: in _call_with_frames_removed
> ???
> <frozen importlib._bootstrap>:1204: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1176: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1126: in _find_and_load_unlocked
> ???
> <frozen importlib._bootstrap>:241: in _call_with_frames_removed
> ???
> <frozen importlib._bootstrap>:1204: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1176: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1140: in _find_and_load_unlocked
> ???
> E ModuleNotFoundError: No module named 'bmtk.tests'
> ________________ ERROR collecting bmtk/tests/simulator/pointnet ________________
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> <frozen importlib._bootstrap>:1204: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1176: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1126: in _find_and_load_unlocked
> ???
> <frozen importlib._bootstrap>:241: in _call_with_frames_removed
> ???
> <frozen importlib._bootstrap>:1204: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1176: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1126: in _find_and_load_unlocked
> ???
> <frozen importlib._bootstrap>:241: in _call_with_frames_removed
> ???
> <frozen importlib._bootstrap>:1204: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1176: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1126: in _find_and_load_unlocked
> ???
> <frozen importlib._bootstrap>:241: in _call_with_frames_removed
> ???
> <frozen importlib._bootstrap>:1204: in _gcd_import
> ???
> <frozen importlib._bootstrap>:1176: in _find_and_load
> ???
> <frozen importlib._bootstrap>:1140: in _find_and_load_unlocked
> ???
> E ModuleNotFoundError: No module named 'bmtk.tests'
> ________ ERROR collecting bmtk/tests/simulator/popnet/test_popgraph.py _________
> ImportError while importing test module '/<<PKGBUILDDIR>>/bmtk/tests/simulator/popnet/test_popgraph.py'.
> Hint: make sure your test modules/packages have valid Python names.
> Traceback:
> /usr/lib/python3.11/importlib/__init__.py:126: in import_module
> return _bootstrap._gcd_import(name[level:], package, level)
> E ModuleNotFoundError: No module named 'bmtk.tests'
> =============================== warnings summary ===============================
> bmtk/utils/sonata/config/sonata_config.py:400
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/utils/sonata/config/sonata_config.py:400: DeprecationWarning: invalid escape sequence '\$'
> variables = [m for m in re.finditer('\$\{?[\w]+\}?', json_str)]
>
> bmtk/simulator/bionet/modules/comsol.py:42
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules/comsol.py:42: DeprecationWarning: invalid escape sequence '\s'
> header = pd.read_csv(comsol_file, sep="\s{3,}", header=None, skiprows=8, nrows=1, engine='python').to_numpy()[0] # load header row of .txt file
>
> bmtk/simulator/bionet/modules/comsol.py:57
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/bionet/modules/comsol.py:57: DeprecationWarning: invalid escape sequence '\s'
> self._comsol = pd.read_csv(comsol_file, sep="\s+", header=None, skiprows=9, names=header) # load data from .txt file
>
> bmtk/simulator/filternet/lgnmodel/util_fns.py:51
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build/bmtk/simulator/filternet/lgnmodel/util_fns.py:51: DeprecationWarning: invalid escape sequence '\D'
> gr_fnames_ord = sorted(gr_fnames, key=lambda x: (int(re.sub('\D', '', x)), x))
>
> -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
> =========================== short test summary info ============================
> ERROR ../../../bmtk/tests/simulator/bionet - ModuleNotFoundError: No module n...
> ERROR ../../../bmtk/tests/simulator/pointnet - ModuleNotFoundError: No module...
> ERROR ../../../bmtk/tests/simulator/popnet/test_popgraph.py
> !!!!!!!!!!!!!!!!!!! Interrupted: 3 errors during collection !!!!!!!!!!!!!!!!!!!!
> ======================== 4 warnings, 3 errors in 4.09s =========================
> E: pybuild pybuild:389: test: plugin distutils failed with: exit code=2: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11/build; python3.11 -m pytest {dir}/bmtk/tests/
> dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.12 3.11" returned exit code 13
The full build log is available from:
http://qa-logs.debian.net/2024/03/19/bmtk_1.0.8+ds-2_unstable.log
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20240319;users=lucas@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20240319&fusertaguser=lucas@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
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