[Debian-med-packaging] Bug#1085372: busco: Python SyntaxWarning

Graham Inggs ginggs at debian.org
Fri Oct 18 17:43:18 BST 2024


Source: busco
Version: 5.5.0-2
User: debian-python at lists.debian.org
Usertags: syntaxwarning

Hi Maintainer

The SyntaxWarning below were emitted when this package was tested with
pipuarts[1].

Regards
Graham


[1] https://piuparts.debian.org/sid/source/b/busco.html


  Setting up busco (5.5.0-2) ...
  /usr/lib/python3/dist-packages/busco/BuscoPlacer.py:211:
SyntaxWarning: invalid escape sequence '\['
    "[^0-9][0-9]*:[0-9]*[^0-9]{0,1}[0-9]*[^0-9]{0,2}[0-9]*\[%s\]"
  /usr/lib/python3/dist-packages/busco/busco_tools/miniprot.py:200:
SyntaxWarning: invalid escape sequence '\*'
    self.ata_seq = re.sub("\*", "", sta_seq.upper())



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