[Debian-med-packaging] Bug#1085416: changeo: Python SyntaxWarning

Graham Inggs ginggs at debian.org
Sat Oct 19 12:19:34 BST 2024


Source: changeo
Version: 1.3.0-2
User: debian-python at lists.debian.org
Usertags: syntaxwarning

Hi Maintainer

The SyntaxWarning below were emitted when this package was tested with
pipuarts[1].

Regards
Graham


[1] https://piuparts.debian.org/sid/source/c/changeo.html


  Setting up changeo (1.3.0-2) ...
  /usr/lib/python3/dist-packages/changeo/Applications.py:283:
SyntaxWarning: invalid escape sequence '\d'
    match = re.search('(?<=Package: igblast )(\d+\.\d+\.\d+)', stdout_str)
  /usr/lib/python3/dist-packages/changeo/IO.py:529: SyntaxWarning:
invalid escape sequence '\('
    clean_regex = re.compile('(,)|(\(see comment\))')
  /usr/lib/python3/dist-packages/changeo/IO.py:530: SyntaxWarning:
invalid escape sequence '\s'
    delim_regex = re.compile('\sor\s')
  /usr/lib/python3/dist-packages/changeo/IO.py:956: SyntaxWarning:
invalid escape sequence '\('
    f = re.search('summary for query sequence \((.+)\)\.', f).group(1)
  /usr/lib/python3/dist-packages/changeo/IO.py:990: SyntaxWarning:
invalid escape sequence '\('
    f = re.search('sequence details \((.+)\)', f).group(1)



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