[Debian-med-packaging] python-biopython_1.84+dfsg-1_source.changes ACCEPTED into unstable
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Mon Sep 23 19:19:43 BST 2024
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Accepted:
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Mon, 23 Sep 2024 19:04:17 +0200
Source: python-biopython
Architecture: source
Version: 1.84+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Changed-By: Étienne Mollier <emollier at debian.org>
Changes:
python-biopython (1.84+dfsg-1) unstable; urgency=medium
.
* Migrate Biopython 1.84 from experimental to unstable.
* d/salsa-ci.yml: disable build path variation in reprotest.
* d/rules: normalize HOME; this stabilizes build reproducibility.
* d/rules: skip PDB_bcif on s390x architecture.
.
python-biopython (1.84+dfsg-1~0exp1) experimental; urgency=medium
.
* New upstream version 1.84+dfsg
* d/watch: fix debian version mangling.
* d/copyright: update copyright years.
* fix-use-of-unversioned-python.patch: delete: hunk removed upstream.
* reproduciblebuild.patch: delete: file disappeared upstream.
* croak-on-muscle5.patch: refresh.
* muscle3.patch: unfuzz.
* seqxml-parser.patch: delete: issue fixed upstream.
* skip-scipy-in-codonalign.patch: unfuzz.
* d/rules: condensate dh_installdocs target to ease readability.
* d/rules: cleanup irrelevant comments and more readable dh_auto_test.
* d/t/run-unit-test: Tutorial.tex does not exist anymore.
* d/t/run-unit-test: new PDB tests require compressed bcif files.
* d/rules: replace distclean target by clean in Doc/.
* d/control: documentation now depends on Sphinx and side modules.
* d/rules: explicitly make html documentation.
* d/copyright: do not advertise LGPL since it is not in use.
* d/rules: cleanup documentation from embeding and privacy breaches.
* d/control: documentation depends on libjs-sphinx and libjs-jquery.
* d/python-biopython-doc.docs: install sphinx html artifacts.
* d/python-biopython-doc.doc-base: update location of the Tutorial.
* d/python-biopython-doc.examples: new: install examples.
* d/python-biopython-doc.lintian-overrides: flag another empty test file.
* fix-type-cast-i386.patch: new: fix PDB test failure on 32-bit.
* d/TODO: build reproducibility needs fixing.
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Files:
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