[Debian-med-packaging] Bug#1095105: python-biopython: FTBFS on s390x: ValueError: 1 Tutorial doctests failed: test_chapter_pdb_line_00071

Andrey Rakhmatullin wrar at debian.org
Mon Feb 3 18:06:04 GMT 2025


Source: python-biopython
Version: 1.85+dfsg-1
Severity: serious
Tags: ftbfs
Control: block 1082237 by -1

https://buildd.debian.org/status/fetch.php?pkg=python-
biopython&arch=s390x&ver=1.85%2Bdfsg-1&stamp=1738546311&raw=0

ERROR: test_doctests (test_Tutorial.TutorialTestCase.test_doctests)
Run tutorial doctests.
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/build/reproducible-path/python-
biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Tutorial.py", line
269, in test_doctests
    raise ValueError(
        "%i Tutorial doctests failed: %s" % (len(failures), ",
".join(failures))
    )
ValueError: 1 Tutorial doctests failed: test_chapter_pdb_line_00071



Fails for both Python versions.


-- System Information:
Debian Release: trixie/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (500, 'testing'), (101, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 6.12.8-amd64 (SMP w/16 CPU threads; PREEMPT)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=ru_RU.UTF-8, LC_CTYPE=ru_RU.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled



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