[Debian-med-packaging] Bug#1097278: libtfbs-perl: ftbfs with GCC-15
Matthias Klose
doko at debian.org
Mon Feb 17 17:34:05 GMT 2025
Package: src:libtfbs-perl
Version: 0.7.1+ds-4
Severity: important
Tags: sid forky
User: debian-gcc at lists.debian.org
Usertags: ftbfs-gcc-15
[This bug is NOT targeted to the upcoming trixie release]
Please keep this issue open in the bug tracker for the package it
was filed for. If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.
The package fails to build in a test rebuild on at least amd64 with
gcc-15/g++-15, but succeeds to build with gcc-14/g++-14. The
severity of this report will be raised before the forky release.
The full build log can be found at:
http://qa-logs.debian.net/2025/02/16/amd64exp/libtfbs-perl_0.7.1+ds-4_unstable_gccexp.log.gz
The last lines of the build log are at the end of this report.
To build with GCC 15, either set CC=gcc-15 CXX=g++-15 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.
apt-get -t=experimental install g++
GCC 15 now defaults to the C23/C++23 standards, exposing many FTBFS.
Other Common build failures are new warnings resulting in build failures
with -Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-15/porting_to.html
[...]
| ^~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~
./lib/pwm_searchPFF.c:64:1: note: declared here
64 | err_log(msg)
| ^~~~~~~
./lib/pwm_searchPFF.c:608:16: error: too many arguments to function ‘err_log’; expected 0, have 1
608 | err_log("DO_SEQ: save_hit failed");
| ^~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~
./lib/pwm_searchPFF.c:64:1: note: declared here
64 | err_log(msg)
| ^~~~~~~
./lib/pwm_searchPFF.c:618:14: error: too many arguments to function ‘err_log’; expected 0, have 1
618 | err_log("DO_SEQ: output failed");
| ^~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~
./lib/pwm_searchPFF.c:64:1: note: declared here
64 | err_log(msg)
| ^~~~~~~
./lib/pwm_searchPFF.c:652:14: error: too many arguments to function ‘err_log’; expected 0, have 1
652 | err_log("DO_SEQ: output failed");
| ^~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~
./lib/pwm_searchPFF.c:64:1: note: declared here
64 | err_log(msg)
| ^~~~~~~
./lib/pwm_searchPFF.c: In function ‘loop_on_seqs’:
./lib/pwm_searchPFF.c:674:1: warning: old-style function definition [-Wold-style-definition]
674 | loop_on_seqs(pargs,pwm,fp, outfp)
| ^~~~~~~~~~~~
./lib/pwm_searchPFF.c:693:10: error: too many arguments to function ‘err_log’; expected 0, have 1
693 | err_log("LOOP_ON_SEQS: get_sequence failed.");
| ^~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./lib/pwm_searchPFF.c:64:1: note: declared here
64 | err_log(msg)
| ^~~~~~~
./lib/pwm_searchPFF.c:700:13: error: too many arguments to function ‘err_log’; expected 0, have 1
700 | err_log("LOOP_ON_SEQS: do_seq failed.");
| ^~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./lib/pwm_searchPFF.c:64:1: note: declared here
64 | err_log(msg)
| ^~~~~~~
./lib/pwm_searchPFF.c: In function ‘do_search’:
./lib/pwm_searchPFF.c:752:7: error: too many arguments to function ‘err_log’; expected 0, have 1
752 | err_log("MAIN: get_matrix failed.");
| ^~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~
./lib/pwm_searchPFF.c:64:1: note: declared here
64 | err_log(msg)
| ^~~~~~~
./lib/pwm_searchPFF.c:758:7: error: too many arguments to function ‘err_log’; expected 0, have 1
758 | err_log("MAIN: open_seq_file failed.");
| ^~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./lib/pwm_searchPFF.c:64:1: note: declared here
64 | err_log(msg)
| ^~~~~~~
./lib/pwm_searchPFF.c:762:7: error: too many arguments to function ‘err_log’; expected 0, have 1
762 | err_log("MAIN: open_outfile failed.");
| ^~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./lib/pwm_searchPFF.c:64:1: note: declared here
64 | err_log(msg)
| ^~~~~~~
./lib/pwm_searchPFF.c:768:7: error: too many arguments to function ‘err_log’; expected 0, have 1
768 | err_log("MAIN: loop_on_seqs failed.");
| ^~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./lib/pwm_searchPFF.c:64:1: note: declared here
64 | err_log(msg)
| ^~~~~~~
make[2]: *** [Makefile:324: pwmsearch.o] Error 1
make[2]: Leaving directory '/build/reproducible-path/libtfbs-perl-0.7.1+ds/Ext'
make[1]: *** [Makefile:638: subdirs] Error 2
make[1]: Leaving directory '/build/reproducible-path/libtfbs-perl-0.7.1+ds'
dh_auto_build: error: make -j8 returned exit code 2
make: *** [debian/rules:11: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
More information about the Debian-med-packaging
mailing list