[Debian-med-packaging] Bug#1094725: Missing dependency on python3-pkg-resources

Andrey Rakhmatullin wrar at debian.org
Thu Jan 30 12:58:52 GMT 2025


Package: ariba
Version: 2.14.7+ds-6
Severity: grave

Installing ariba on a minimal system and running it:

Traceback (most recent call last):
  File "/usr/bin/ariba", line 3, in <module>
    import ariba
  File "/usr/lib/python3/dist-packages/ariba/__init__.py", line 1, in <module>
    from pkg_resources import get_distribution
ModuleNotFoundError: No module named 'pkg_resources'



-- System Information:
Debian Release: trixie/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (500, 'testing'), (101, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 6.12.8-amd64 (SMP w/16 CPU threads; PREEMPT)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=ru_RU.UTF-8, LC_CTYPE=ru_RU.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

Versions of packages ariba depends on:
pn  bowtie2             <none>
pn  cd-hit              <none>
pn  fastaq              <none>
ii  libc6               2.40-6
pn  libfml0             <none>
ii  libgcc-s1           14.2.0-15
pn  libminimap0         <none>
ii  libstdc++6          14.2.0-15
pn  mash                <none>
pn  mummer              <none>
ii  python3             3.12.8-1
pn  python3-biopython   <none>
ii  python3-bs4         4.12.3-3
pn  python3-dendropy    <none>
pn  python3-matplotlib  <none>
pn  python3-pymummer    <none>
pn  python3-pysam       <none>
pn  python3-tk          <none>
ii  zlib1g              1:1.3.dfsg+really1.3.1-1+b1

ariba recommends no packages.

Versions of packages ariba suggests:
pn  spades  <none>



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