[Debian-med-packaging] Bug#1143654: freecontact: FTBFS: BioXSD-1.1_xsd.hxx:9342:5: error: expected unqualified-id before 'concept'

Santiago Vila sanvila at debian.org
Wed Aug 5 12:23:44 BST 2026


Package: src:freecontact
Version: 1.0.21-17
Severity: serious
Tags: ftbfs forky sid

Dear maintainer:

During a rebuild of all packages in unstable, this package failed to build.

Below you will find the last part of the build log (probably the most
relevant part, but not necessarily). If required, the full build log
is available here:

https://people.debian.org/~sanvila/build-logs/202608/

About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.

If you cannot reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:freecontact, so that this is still
visible in the BTS web page for this package.

Thanks.

--------------------------------------------------------------------------------
[...]
 debian/rules clean
dh clean --with bash-completion
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -f build-indep-stamp
dh_auto_clean
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_clean
 debian/rules binary
dh binary --with bash-completion
   dh_update_autotools_config
   dh_autoreconf
autoreconf: export WARNINGS=
autoreconf: Entering directory '.'
autoreconf: configure.ac: no obvious need to run autopoint

[... snipped ...]

      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.hxx:951:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  951 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.hxx:973:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  973 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.hxx:996:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  996 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.hxx:1013:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
 1013 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.hxx:1029:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
 1029 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.hxx:1047:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
 1047 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.hxx:1061:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
 1061 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.hxx:1078:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
 1078 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx:67:16: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   67 |   flat (::std::auto_ptr< flat_type > x)
      |                ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx:97:23: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
   97 |   FcAlignment (::std::auto_ptr< flat_type > flat)
      |                       ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: In member function ‘void freecontact_input_xsd::FcAlignment::parse(xsd::cxx::xml::dom::parser<char>&, xml_schema::flags)’:
freecontact_input_xsd.cxx:139:16: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  139 |         ::std::auto_ptr< ::xsd::cxx::tree::type > tmp (
      |                ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx:150:20: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  150 |             ::std::auto_ptr< flat_type > r (
      |                    ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: At global scope:
freecontact_input_xsd.cxx:212:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  212 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: In function ‘std::auto_ptr<freecontact_input_xsd::FcAlignment> freecontact_input_xsd::alignment(const std::string&, xml_schema::flags, const xml_schema::properties&)’:
freecontact_input_xsd.cxx:229:19: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  229 |     return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > (
      |                   ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: At global scope:
freecontact_input_xsd.cxx:234:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  234 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: In function ‘std::auto_ptr<freecontact_input_xsd::FcAlignment> freecontact_input_xsd::alignment(const std::string&, xml_schema::error_handler&, xml_schema::flags, const xml_schema::properties&)’:
freecontact_input_xsd.cxx:251:19: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  251 |     return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > (
      |                   ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: At global scope:
freecontact_input_xsd.cxx:256:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  256 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: In function ‘std::auto_ptr<freecontact_input_xsd::FcAlignment> freecontact_input_xsd::alignment(const std::string&, xercesc_3_2::DOMErrorHandler&, xml_schema::flags, const xml_schema::properties&)’:
freecontact_input_xsd.cxx:269:19: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  269 |     return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > (
      |                   ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: At global scope:
freecontact_input_xsd.cxx:274:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  274 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx:287:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  287 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx:301:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  301 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx:311:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  311 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx:325:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  325 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx:340:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  340 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx:351:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  351 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: In function ‘std::auto_ptr<freecontact_input_xsd::FcAlignment> freecontact_input_xsd::alignment(xercesc_3_2::InputSource&, xml_schema::flags, const xml_schema::properties&)’:
freecontact_input_xsd.cxx:364:19: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  364 |     return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > (
      |                   ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: At global scope:
freecontact_input_xsd.cxx:369:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  369 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: In function ‘std::auto_ptr<freecontact_input_xsd::FcAlignment> freecontact_input_xsd::alignment(xercesc_3_2::InputSource&, xml_schema::error_handler&, xml_schema::flags, const xml_schema::properties&)’:
freecontact_input_xsd.cxx:382:19: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  382 |     return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > (
      |                   ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: At global scope:
freecontact_input_xsd.cxx:387:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  387 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: In function ‘std::auto_ptr<freecontact_input_xsd::FcAlignment> freecontact_input_xsd::alignment(xercesc_3_2::InputSource&, xercesc_3_2::DOMErrorHandler&, xml_schema::flags, const xml_schema::properties&)’:
freecontact_input_xsd.cxx:400:19: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  400 |     return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > (
      |                   ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: At global scope:
freecontact_input_xsd.cxx:405:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  405 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: In function ‘std::auto_ptr<freecontact_input_xsd::FcAlignment> freecontact_input_xsd::alignment(const xercesc_3_2::DOMDocument&, xml_schema::flags, const xml_schema::properties&)’:
freecontact_input_xsd.cxx:415:21: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  415 |       return ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > (
      |                     ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx:424:12: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  424 |     ::std::auto_ptr< ::xsd::cxx::tree::type > tmp (
      |            ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx:433:14: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  433 |       ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > r (
      |              ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: At global scope:
freecontact_input_xsd.cxx:451:10: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  451 |   ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment >
      |          ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx: In function ‘std::auto_ptr<freecontact_input_xsd::FcAlignment> freecontact_input_xsd::alignment(xsd::cxx::xml::dom::auto_ptr<xercesc_3_2::DOMDocument>, xml_schema::flags, const xml_schema::properties&)’:
freecontact_input_xsd.cxx:473:12: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  473 |     ::std::auto_ptr< ::xsd::cxx::tree::type > tmp (
      |            ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact_input_xsd.cxx:483:14: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  483 |       ::std::auto_ptr< ::freecontact_input_xsd::FcAlignment > r (
      |              ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from freecontact.cpp:25:
../lib/freecontact.h:69:54: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   69 | class LIBFREEC_API ali_t : public std::vector<__m128i>
      |                                                      ^
../lib/freecontact.h: In constructor ‘freecontact::ali_t::ali_t(uint16_t)’:
../lib/freecontact.h:80:79: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
   80 |                     ali_t( const uint16_t __alilen = 0 ) : std::vector<__m128i>(), seqcnt(0), alilen(__alilen), alilen16(( alilen-1 )/16 + 1), alilenpad( 16 * alilen16 )
      |                                                                               ^
freecontact.cpp: In function ‘int main(int, char**)’:
freecontact.cpp:165:9: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  165 |         auto_ptr<std::ifstream> ali_ifs_p;
      |         ^~~~~~~~
In file included from /usr/include/c++/16/memory:80,
                 from /usr/include/boost/any.hpp:19,
                 from /usr/include/boost/program_options/value_semantic.hpp:12,
                 from /usr/include/boost/program_options/options_description.hpp:13,
                 from /usr/include/boost/program_options.hpp:15,
                 from freecontact.cpp:17:
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
freecontact.cpp:169:25: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
  169 |             ali_ifs_p = auto_ptr<std::ifstream>(new std::ifstream(vm["ali"].as<string>().c_str()));
      |                         ^~~~~~~~
/usr/include/c++/16/bits/unique_ptr.h:58:28: note: declared here
   58 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
make[2]: *** [Makefile:857: freecontact-freecontact_input_xsd.o] Error 1
make[2]: *** Waiting for unfinished jobs....
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: *** [Makefile:475: all-recursive] Error 1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: error: make -j2 returned exit code 2
make: *** [debian/rules:13: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2
--------------------------------------------------------------------------------



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