[Debian-med-packaging] Bug#1139484: picard-tools: FTBFS: Test: Test method testCleanSam[1](simple_overhang.sam, 99M1S)(picard.sam.CleanSamTest) produced standard out/err: Ignoring SAM validation error: ERROR::CIGAR_MAPS_OFF_REFERENCE:Read name simple_overhang, Read CIGAR M operator maps off end of reference

Andreas Tille tille at debian.org
Wed Jul 15 05:48:05 BST 2026


Hi Pierre,

Am Tue, Jul 14, 2026 at 10:10:57PM +0200 schrieb Pierre Gruet:
> I suggest to wait for the next upstream
> release of htsjdk as it should fix the issue, hopefully.

Fine for me.  Thank you for checking
    Andreas.

-- 
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