[Debian-med-packaging] Bug#1129829: orthanc-wsi: FTBFS with boost 1.90
Santiago Vila
sanvila at debian.org
Thu Mar 5 23:21:25 GMT 2026
Package: src:orthanc-wsi
Version: 3.3+dfsg-2
Severity: serious
Tags: ftbfs forky sid
Dear maintainer:
During a rebuild of all packages in unstable, this package failed to build.
Below you will find the last part of the build log (probably the most
relevant part, but not necessarily). If required, the full build log
is available here:
https://people.debian.org/~sanvila/build-logs/202603/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you cannot reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:orthanc-wsi, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean
debian/rules override_dh_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_clean BuildApplications/
dh_clean BuildViewer/
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules binary
dh binary
dh_update_autotools_config
dh_autoreconf
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir BuildApplications
dh_auto_configure --builddirectory=BuildApplications \
--sourcedirectory=Applications \
-- -DCMAKE_SKIP_RPATH:BOOL=ON -DORTHANC_FRAMEWORK_SOURCE=system -DORTHANC_FRAMEWORK_USE_SHARED:BOOL=OFF -DORTHANC_FRAMEWORK_ADDITIONAL_LIBRARIES="boost_filesystem boost_iostreams boost_locale boost_regex boost_thread jsoncpp pugixml uuid dcmdata ofstd jpeg png curl boost_program_options dcmjpeg dcmjpls dcmimage dl crypto z" -DCMAKE_BUILD_TYPE=None
cd BuildApplications && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_SKIP_RPATH:BOOL=ON -DORTHANC_FRAMEWORK_SOURCE=system -DORTHANC_FRAMEWORK_USE_SHARED:BOOL=OFF -DORTHANC_FRAMEWORK_ADDITIONAL_LIBRARIES="boost_filesystem boost_iostreams boost_locale boost_regex boost_thread jsoncpp pugixml uuid dcmdata ofstd jpeg png curl boost_program_options dcmjpeg dcmjpls dcmimage dl crypto z" -DCMAKE_BUILD_TYPE=None ../Applications
-- The C compiler identification is GNU 15.2.0
-- The CXX compiler identification is GNU 15.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found Python: /usr/bin/python3 (found version "3.13.12") found components: Interpreter
JsonCpp include dir: /usr/include/jsoncpp
-- Looking for C++ include /usr/include/jsoncpp/json/reader.h
-- Looking for C++ include /usr/include/jsoncpp/json/reader.h - found
Orthanc framework include dir: /usr/include/orthanc-framework
-- Looking for C++ include /usr/include/openjpeg-2.1/openjpeg.h
-- Looking for C++ include /usr/include/openjpeg-2.1/openjpeg.h - found
-- Looking for opj_image_create in openjpeg
-- Looking for opj_image_create in openjpeg - not found
-- Looking for opj_image_create in openjp2
-- Looking for opj_image_create in openjp2 - found
-- Looking for opj_destroy_decompress
-- Looking for opj_destroy_decompress - not found
-- Looking for opj_destroy_codec
-- Looking for opj_destroy_codec - found
Your system has OpenJPEG version 2
-- Looking for C++ include tiff.h
-- Looking for C++ include tiff.h - found
-- Looking for TIFFGetField in tiff
-- Looking for TIFFGetField in tiff - found
-- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
Doxygen not found. The documentation will not be built.
-- Configuring done (1.3s)
-- Generating done (0.0s)
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_EXPORT_NO_PACKAGE_REGISTRY
CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
CMAKE_INSTALL_LIBDIR
CMAKE_INSTALL_LOCALSTATEDIR
CMAKE_INSTALL_RUNSTATEDIR
CMAKE_INSTALL_SYSCONFDIR
FETCHCONTENT_FULLY_DISCONNECTED
-- Build files have been written to: /<<PKGBUILDDIR>>/BuildApplications
dh_auto_configure --builddirectory=BuildViewer \
--sourcedirectory=ViewerPlugin \
-- -DCMAKE_SKIP_RPATH:BOOL=ON -DORTHANC_FRAMEWORK_SOURCE=system -DORTHANC_FRAMEWORK_USE_SHARED:BOOL=OFF -DORTHANC_FRAMEWORK_ADDITIONAL_LIBRARIES="boost_filesystem boost_iostreams boost_locale boost_regex boost_thread jsoncpp pugixml uuid dcmdata ofstd jpeg png curl boost_program_options dcmjpeg dcmjpls dcmimage dl crypto z" -DCMAKE_BUILD_TYPE=None
cd BuildViewer && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_SKIP_RPATH:BOOL=ON -DORTHANC_FRAMEWORK_SOURCE=system -DORTHANC_FRAMEWORK_USE_SHARED:BOOL=OFF -DORTHANC_FRAMEWORK_ADDITIONAL_LIBRARIES="boost_filesystem boost_iostreams boost_locale boost_regex boost_thread jsoncpp pugixml uuid dcmdata ofstd jpeg png curl boost_program_options dcmjpeg dcmjpls dcmimage dl crypto z" -DCMAKE_BUILD_TYPE=None ../ViewerPlugin
-- The C compiler identification is GNU 15.2.0
-- The CXX compiler identification is GNU 15.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found Python: /usr/bin/python3 (found version "3.13.12") found components: Interpreter
JsonCpp include dir: /usr/include/jsoncpp
-- Looking for C++ include /usr/include/jsoncpp/json/reader.h
-- Looking for C++ include /usr/include/jsoncpp/json/reader.h - found
Orthanc framework include dir: /usr/include/orthanc-framework
-- Looking for C++ include /usr/include/openjpeg-2.1/openjpeg.h
-- Looking for C++ include /usr/include/openjpeg-2.1/openjpeg.h - found
-- Looking for opj_image_create in openjpeg
-- Looking for opj_image_create in openjpeg - not found
-- Looking for opj_image_create in openjp2
-- Looking for opj_image_create in openjp2 - found
-- Looking for opj_destroy_decompress
-- Looking for opj_destroy_decompress - not found
-- Looking for opj_destroy_codec
-- Looking for opj_destroy_codec - found
Your system has OpenJPEG version 2
-- Looking for C++ include orthanc/OrthancCPlugin.h
-- Looking for C++ include orthanc/OrthancCPlugin.h - found
Setting the version of the library to 3.3
-- Configuring done (1.3s)
-- Generating done (0.0s)
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_EXPORT_NO_PACKAGE_REGISTRY
CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
CMAKE_INSTALL_LIBDIR
CMAKE_INSTALL_LOCALSTATEDIR
CMAKE_INSTALL_RUNSTATEDIR
CMAKE_INSTALL_SYSCONFDIR
FETCHCONTENT_FULLY_DISCONNECTED
-- Build files have been written to: /<<PKGBUILDDIR>>/BuildViewer
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build --builddirectory=BuildApplications \
--sourcedirectory=Applications
cd BuildApplications && make -j2 INSTALL="install --strip-program=true" VERBOSE=1
make[2]: Entering directory '/<<PKGBUILDDIR>>/BuildApplications'
/usr/bin/cmake -S/<<PKGBUILDDIR>>/Applications -B/<<PKGBUILDDIR>>/BuildApplications --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/BuildApplications/CMakeFiles /<<PKGBUILDDIR>>/BuildApplications//CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/<<PKGBUILDDIR>>/BuildApplications'
make -f CMakeFiles/OrthancWSIFramework.dir/build.make CMakeFiles/OrthancWSIFramework.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/BuildApplications'
[ 2%] Generating AUTOGENERATED/EmbeddedResources.h, AUTOGENERATED/EmbeddedResources.cpp
/usr/bin/python3 /<<PKGBUILDDIR>>/Resources/Orthanc/CMake/EmbedResources.py /<<PKGBUILDDIR>>/BuildApplications/AUTOGENERATED/EmbeddedResources BRIGHTFIELD_OPTICAL_PATH /<<PKGBUILDDIR>>/Applications/../Resources/BrightfieldOpticalPath.json SAMPLE_DATASET /<<PKGBUILDDIR>>/Applications/../Resources/SampleDataset.json SRGB_ICC_PROFILE /<<PKGBUILDDIR>>/Applications/../Resources/sRGB.icc
cd /<<PKGBUILDDIR>>/BuildApplications && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>>/Applications /<<PKGBUILDDIR>>/Applications /<<PKGBUILDDIR>>/BuildApplications /<<PKGBUILDDIR>>/BuildApplications /<<PKGBUILDDIR>>/BuildApplications/CMakeFiles/OrthancWSIFramework.dir/DependInfo.cmake "--color=" OrthancWSIFramework
make[4]: Leaving directory '/<<PKGBUILDDIR>>/BuildApplications'
make -f CMakeFiles/OrthancWSIFramework.dir/build.make CMakeFiles/OrthancWSIFramework.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/BuildApplications'
[ 6%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Algorithms/PyramidReader.cpp.o
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/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] s/ReconstructPyramidCommand.cpp
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] rk/Algorithms/PyramidReader.cpp
[ 8%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Algorithms/TranscodeTileCommand.cpp.o
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[ 10%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/ColorSpaces.cpp.o
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[ 12%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/DicomToolbox.cpp.o
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[ 14%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/DicomizerParameters.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] amework/DicomizerParameters.cpp
[ 16%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Enumerations.cpp.o
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[ 18%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/ImageToolbox.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGING_PLUGIN=0 -DORTHANC_OPENJPEG_MAJOR_VERSION=2 -DORTHANC_WSI_VERSION=\"3.3\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE=1 -D__ORTHANC_FILE__=\"ImageToolbox.cpp\" -I/<<PKGBUILDDIR>>/BuildApplications/AUTOGENERATED -I/usr/include/jsoncpp -I/usr/include/orthanc-framework -I/usr/include/openjpeg-2.1 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-long-long -Wno-variadic-macros -MD -MT CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/ImageToolbox.cpp.o -MF CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/ImageToolbox.cpp.o.d -o CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/ImageToolbox.cpp.o -c /<<PKGBUILDDIR>>/Framework/ImageToolbox.cpp
[ 20%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/ImagedVolumeParameters.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] work/ImagedVolumeParameters.cpp
[ 22%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Inputs/CytomineImage.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] mework/Inputs/CytomineImage.cpp
[ 24%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Inputs/DecodedPyramidCache.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] /Inputs/DecodedPyramidCache.cpp
/<<PKGBUILDDIR>>/Framework/Inputs/CytomineImage.cpp: In constructor ‘{anonymous}::HmacContext::HmacContext()’:
/<<PKGBUILDDIR>>/Framework/Inputs/CytomineImage.cpp:81:27: warning: ‘HMAC_CTX* HMAC_CTX_new()’ is deprecated: Since OpenSSL 3.0 [-Wdeprecated-declarations]
81 | hmac_ = HMAC_CTX_new();
| ~~~~~~~~~~~~^~
In file included from /<<PKGBUILDDIR>>/Framework/Inputs/CytomineImage.cpp:37:
/usr/include/openssl/hmac.h:33:33: note: declared here
33 | OSSL_DEPRECATEDIN_3_0 HMAC_CTX *HMAC_CTX_new(void);
| ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Framework/Inputs/CytomineImage.cpp: In destructor ‘{anonymous}::HmacContext::~HmacContext()’:
/<<PKGBUILDDIR>>/Framework/Inputs/CytomineImage.cpp:90:20: warning: ‘void HMAC_CTX_free(HMAC_CTX*)’ is deprecated: Since OpenSSL 3.0 [-Wdeprecated-declarations]
90 | HMAC_CTX_free(hmac_);
| ~~~~~~~~~~~~~^~~~~~~
/usr/include/openssl/hmac.h:35:28: note: declared here
35 | OSSL_DEPRECATEDIN_3_0 void HMAC_CTX_free(HMAC_CTX *ctx);
| ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Framework/Inputs/CytomineImage.cpp: In member function ‘bool OrthancWSI::CytomineImage::GetCytomine(std::string&, const std::string&, Orthanc::MimeType) const’:
/<<PKGBUILDDIR>>/Framework/Inputs/CytomineImage.cpp:139:23: warning: ‘int HMAC_Init_ex(HMAC_CTX*, const void*, int, const EVP_MD*, ENGINE*)’ is deprecated: Since OpenSSL 3.0 [-Wdeprecated-declarations]
139 | if (HMAC_Init_ex(hmac.GetObject(), privateKey_.c_str(), privateKey_.length(), EVP_sha1(), NULL) != 1 ||
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openssl/hmac.h:43:27: note: declared here
43 | OSSL_DEPRECATEDIN_3_0 int HMAC_Init_ex(HMAC_CTX *ctx, const void *key, int len,
| ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Framework/Inputs/CytomineImage.cpp:140:22: warning: ‘int HMAC_Update(HMAC_CTX*, const unsigned char*, size_t)’ is deprecated: Since OpenSSL 3.0 [-Wdeprecated-declarations]
140 | HMAC_Update(hmac.GetObject(), reinterpret_cast<const unsigned char*>(token.c_str()), token.size()) != 1 ||
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openssl/hmac.h:45:27: note: declared here
45 | OSSL_DEPRECATEDIN_3_0 int HMAC_Update(HMAC_CTX *ctx, const unsigned char *data,
| ^~~~~~~~~~~
/<<PKGBUILDDIR>>/Framework/Inputs/CytomineImage.cpp:141:21: warning: ‘int HMAC_Final(HMAC_CTX*, unsigned char*, unsigned int*)’ is deprecated: Since OpenSSL 3.0 [-Wdeprecated-declarations]
141 | HMAC_Final(hmac.GetObject(), md, &length) != 1)
| ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openssl/hmac.h:47:27: note: declared here
47 | OSSL_DEPRECATEDIN_3_0 int HMAC_Final(HMAC_CTX *ctx, unsigned char *md,
| ^~~~~~~~~~
[ 26%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Inputs/DecodedTiledPyramid.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] /Inputs/DecodedTiledPyramid.cpp
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[ 48%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Inputs/TiledPyramidStatistics.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] puts/TiledPyramidStatistics.cpp
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/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGING_PLUGIN=0 -DORTHANC_OPENJPEG_MAJOR_VERSION=2 -DORTHANC_WSI_VERSION=\"3.3\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE=1 -D__ORTHANC_FILE__=\"Jpeg2000Reader.cpp\" -I/<<PKGBUILDDIR>>/BuildApplications/AUTOGENERATED -I/usr/include/jsoncpp -I/usr/include/orthanc-framework -I/usr/include/openjpeg-2.1 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-long-long -Wno-variadic-macros -MD -MT CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Jpeg2000Reader.cpp.o -MF CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Jpeg2000Reader.cpp.o.d -o CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Jpeg2000Reader.cpp.o -c /<<PKGBUILDDIR>>/Framework/Jpeg2000Reader.cpp
[ 53%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Jpeg2000Writer.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGING_PLUGIN=0 -DORTHANC_OPENJPEG_MAJOR_VERSION=2 -DORTHANC_WSI_VERSION=\"3.3\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE=1 -D__ORTHANC_FILE__=\"Jpeg2000Writer.cpp\" -I/<<PKGBUILDDIR>>/BuildApplications/AUTOGENERATED -I/usr/include/jsoncpp -I/usr/include/orthanc-framework -I/usr/include/openjpeg-2.1 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-long-long -Wno-variadic-macros -MD -MT CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Jpeg2000Writer.cpp.o -MF CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Jpeg2000Writer.cpp.o.d -o CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Jpeg2000Writer.cpp.o -c /<<PKGBUILDDIR>>/Framework/Jpeg2000Writer.cpp
[ 55%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/MultiThreading/BagOfTasksProcessor.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] reading/BagOfTasksProcessor.cpp
/<<PKGBUILDDIR>>/Framework/Jpeg2000Writer.cpp: In member function ‘void OrthancWSI::{anonymous}::OpenJpegImage::SetupComponents(unsigned int, unsigned int, Orthanc::PixelFormat)’:
/<<PKGBUILDDIR>>/Framework/Jpeg2000Writer.cpp:86:26: warning: ‘opj_image_comptparm::bpp’ is deprecated: Use prec instead [-Wdeprecated-declarations]
86 | components_[i].bpp = 8;
| ^~~
In file included from /<<PKGBUILDDIR>>/Framework/Jpeg2000Writer.cpp:30:
/usr/include/openjpeg-2.1/openjpeg.h:754:45: note: declared here
754 | OPJ_DEPRECATED_STRUCT_MEMBER(OPJ_UINT32 bpp, "Use prec instead");
| ^~~
/usr/include/openjpeg-2.1/openjpeg.h:80:83: note: in definition of macro ‘OPJ_DEPRECATED_STRUCT_MEMBER’
80 | #define OPJ_DEPRECATED_STRUCT_MEMBER(memb, msg) __attribute__ ((deprecated(msg))) memb
| ^~~~
/<<PKGBUILDDIR>>/Framework/Jpeg2000Writer.cpp:86:26: warning: ‘opj_image_comptparm::bpp’ is deprecated: Use prec instead [-Wdeprecated-declarations]
86 | components_[i].bpp = 8;
| ^~~
/usr/include/openjpeg-2.1/openjpeg.h:754:45: note: declared here
754 | OPJ_DEPRECATED_STRUCT_MEMBER(OPJ_UINT32 bpp, "Use prec instead");
| ^~~
/usr/include/openjpeg-2.1/openjpeg.h:80:83: note: in definition of macro ‘OPJ_DEPRECATED_STRUCT_MEMBER’
80 | #define OPJ_DEPRECATED_STRUCT_MEMBER(memb, msg) __attribute__ ((deprecated(msg))) memb
| ^~~~
/<<PKGBUILDDIR>>/Framework/Jpeg2000Writer.cpp:86:26: warning: ‘opj_image_comptparm::bpp’ is deprecated: Use prec instead [-Wdeprecated-declarations]
86 | components_[i].bpp = 8;
| ^~~
/usr/include/openjpeg-2.1/openjpeg.h:754:45: note: declared here
754 | OPJ_DEPRECATED_STRUCT_MEMBER(OPJ_UINT32 bpp, "Use prec instead");
| ^~~
/usr/include/openjpeg-2.1/openjpeg.h:80:83: note: in definition of macro ‘OPJ_DEPRECATED_STRUCT_MEMBER’
80 | #define OPJ_DEPRECATED_STRUCT_MEMBER(memb, msg) __attribute__ ((deprecated(msg))) memb
| ^~~~
[ 57%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Outputs/DicomPyramidWriter.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] /Outputs/DicomPyramidWriter.cpp
[ 59%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Outputs/HierarchicalTiffWriter.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] puts/HierarchicalTiffWriter.cpp
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/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] /Outputs/InMemoryTiledImage.cpp
[ 63%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Outputs/MultiframeDicomWriter.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] tputs/MultiframeDicomWriter.cpp
[ 65%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Outputs/PyramidWriterBase.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] k/Outputs/PyramidWriterBase.cpp
[ 67%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/Outputs/TruncatedPyramidWriter.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] puts/TruncatedPyramidWriter.cpp
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/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] mework/Targets/FolderTarget.cpp
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/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] ework/Targets/OrthancTarget.cpp
[ 73%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/TiffReader.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGING_PLUGIN=0 -DORTHANC_OPENJPEG_MAJOR_VERSION=2 -DORTHANC_WSI_VERSION=\"3.3\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE=1 -D__ORTHANC_FILE__=\"TiffReader.cpp\" -I/<<PKGBUILDDIR>>/BuildApplications/AUTOGENERATED -I/usr/include/jsoncpp -I/usr/include/orthanc-framework -I/usr/include/openjpeg-2.1 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-long-long -Wno-variadic-macros -MD -MT CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/TiffReader.cpp.o -MF CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/TiffReader.cpp.o.d -o CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Framework/TiffReader.cpp.o -c /<<PKGBUILDDIR>>/Framework/TiffReader.cpp
[ 75%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/AUTOGENERATED/EmbeddedResources.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGING_PLUGIN=0 -DORTHANC_OPENJPEG_MAJOR_VERSION=2 -DORTHANC_WSI_VERSION=\"3.3\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE=1 -D__ORTHANC_FILE__=\"EmbeddedResources.cpp\" -I/<<PKGBUILDDIR>>/BuildApplications/AUTOGENERATED -I/usr/include/jsoncpp -I/usr/include/orthanc-framework -I/usr/include/openjpeg-2.1 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-long-long -Wno-variadic-macros -MD -MT CMakeFiles/OrthancWSIFramework.dir/AUTOGENERATED/EmbeddedResources.cpp.o -MF CMakeFiles/OrthancWSIFramework.dir/AUTOGENERATED/EmbeddedResources.cpp.o.d -o CMakeFiles/OrthancWSIFramework.dir/AUTOGENERATED/EmbeddedResources.cpp.o -c /<<PKGBUILDDIR>>/BuildApplications/AUTOGENERATED/EmbeddedResources.cpp
[ 77%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Resources/Orthanc/Stone/DicomDatasetReader.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] nc/Stone/DicomDatasetReader.cpp
[ 79%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Resources/Orthanc/Stone/FullOrthancDataset.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] nc/Stone/FullOrthancDataset.cpp
[ 81%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Resources/Orthanc/Stone/IOrthancConnection.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] nc/Stone/IOrthancConnection.cpp
[ 83%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Resources/Orthanc/Stone/OrthancHttpConnection.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] Stone/OrthancHttpConnection.cpp
[ 85%] Building CXX object CMakeFiles/OrthancWSIFramework.dir/<<PKGBUILDDIR>>/Resources/Orthanc/StoneToolbox.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGI [too-long-redacted] ources/Orthanc/StoneToolbox.cpp
[ 87%] Linking CXX static library libOrthancWSIFramework.a
/usr/bin/cmake -P CMakeFiles/OrthancWSIFramework.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/OrthancWSIFramework.dir/link.txt --verbose=1
/usr/bin/ar qc libOrthancWSIFramework.a "CMakeFiles/OrthancW [too-long-redacted] ces/Orthanc/StoneToolbox.cpp.o"
/usr/bin/ranlib libOrthancWSIFramework.a
make[4]: Leaving directory '/<<PKGBUILDDIR>>/BuildApplications'
[ 87%] Built target OrthancWSIFramework
make -f CMakeFiles/OrthancWSIDicomizer.dir/build.make CMakeFiles/OrthancWSIDicomizer.dir/depend
make -f CMakeFiles/OrthancWSIDicomToTiff.dir/build.make CMakeFiles/OrthancWSIDicomToTiff.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/BuildApplications'
cd /<<PKGBUILDDIR>>/BuildApplications && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>>/Applications /<<PKGBUILDDIR>>/Applications /<<PKGBUILDDIR>>/BuildApplications /<<PKGBUILDDIR>>/BuildApplications /<<PKGBUILDDIR>>/BuildApplications/CMakeFiles/OrthancWSIDicomizer.dir/DependInfo.cmake "--color=" OrthancWSIDicomizer
make[4]: Entering directory '/<<PKGBUILDDIR>>/BuildApplications'
cd /<<PKGBUILDDIR>>/BuildApplications && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>>/Applications /<<PKGBUILDDIR>>/Applications /<<PKGBUILDDIR>>/BuildApplications /<<PKGBUILDDIR>>/BuildApplications /<<PKGBUILDDIR>>/BuildApplications/CMakeFiles/OrthancWSIDicomToTiff.dir/DependInfo.cmake "--color=" OrthancWSIDicomToTiff
make[4]: Leaving directory '/<<PKGBUILDDIR>>/BuildApplications'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/BuildApplications'
make -f CMakeFiles/OrthancWSIDicomToTiff.dir/build.make CMakeFiles/OrthancWSIDicomToTiff.dir/build
make -f CMakeFiles/OrthancWSIDicomizer.dir/build.make CMakeFiles/OrthancWSIDicomizer.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/BuildApplications'
make[4]: Entering directory '/<<PKGBUILDDIR>>/BuildApplications'
[ 91%] Building CXX object CMakeFiles/OrthancWSIDicomToTiff.dir/DicomToTiff.cpp.o
[ 91%] Building CXX object CMakeFiles/OrthancWSIDicomizer.dir/Dicomizer.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGING_PLUGIN=0 -DORTHANC_OPENJPEG_MAJOR_VERSION=2 -DORTHANC_WSI_VERSION=\"3.3\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE=1 -D__ORTHANC_FILE__=\"Dicomizer.cpp\" -I/<<PKGBUILDDIR>>/BuildApplications/AUTOGENERATED -I/usr/include/jsoncpp -I/usr/include/orthanc-framework -I/usr/include/openjpeg-2.1 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-long-long -Wno-variadic-macros -MD -MT CMakeFiles/OrthancWSIDicomizer.dir/Dicomizer.cpp.o -MF CMakeFiles/OrthancWSIDicomizer.dir/Dicomizer.cpp.o.d -o CMakeFiles/OrthancWSIDicomizer.dir/Dicomizer.cpp.o -c /<<PKGBUILDDIR>>/Applications/Dicomizer.cpp
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGING_PLUGIN=0 -DORTHANC_OPENJPEG_MAJOR_VERSION=2 -DORTHANC_WSI_VERSION=\"3.3\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE=1 -D__ORTHANC_FILE__=\"DicomToTiff.cpp\" -I/<<PKGBUILDDIR>>/BuildApplications/AUTOGENERATED -I/usr/include/jsoncpp -I/usr/include/orthanc-framework -I/usr/include/openjpeg-2.1 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-long-long -Wno-variadic-macros -MD -MT CMakeFiles/OrthancWSIDicomToTiff.dir/DicomToTiff.cpp.o -MF CMakeFiles/OrthancWSIDicomToTiff.dir/DicomToTiff.cpp.o.d -o CMakeFiles/OrthancWSIDicomToTiff.dir/DicomToTiff.cpp.o -c /<<PKGBUILDDIR>>/Applications/DicomToTiff.cpp
[ 93%] Building CXX object CMakeFiles/OrthancWSIDicomToTiff.dir/ApplicationToolbox.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGING_PLUGIN=0 -DORTHANC_OPENJPEG_MAJOR_VERSION=2 -DORTHANC_WSI_VERSION=\"3.3\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE=1 -D__ORTHANC_FILE__=\"ApplicationToolbox.cpp\" -I/<<PKGBUILDDIR>>/BuildApplications/AUTOGENERATED -I/usr/include/jsoncpp -I/usr/include/orthanc-framework -I/usr/include/openjpeg-2.1 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-long-long -Wno-variadic-macros -MD -MT CMakeFiles/OrthancWSIDicomToTiff.dir/ApplicationToolbox.cpp.o -MF CMakeFiles/OrthancWSIDicomToTiff.dir/ApplicationToolbox.cpp.o.d -o CMakeFiles/OrthancWSIDicomToTiff.dir/ApplicationToolbox.cpp.o -c /<<PKGBUILDDIR>>/Applications/ApplicationToolbox.cpp
[ 95%] Building CXX object CMakeFiles/OrthancWSIDicomizer.dir/ApplicationToolbox.cpp.o
/usr/bin/c++ -DORTHANC_ENABLE_DCMTK=1 -DORTHANC_ENABLE_LOGGING_PLUGIN=0 -DORTHANC_OPENJPEG_MAJOR_VERSION=2 -DORTHANC_WSI_VERSION=\"3.3\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE=1 -D__ORTHANC_FILE__=\"ApplicationToolbox.cpp\" -I/<<PKGBUILDDIR>>/BuildApplications/AUTOGENERATED -I/usr/include/jsoncpp -I/usr/include/orthanc-framework -I/usr/include/openjpeg-2.1 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DNDEBUG -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wno-long-long -Wno-variadic-macros -MD -MT CMakeFiles/OrthancWSIDicomizer.dir/ApplicationToolbox.cpp.o -MF CMakeFiles/OrthancWSIDicomizer.dir/ApplicationToolbox.cpp.o.d -o CMakeFiles/OrthancWSIDicomizer.dir/ApplicationToolbox.cpp.o -c /<<PKGBUILDDIR>>/Applications/ApplicationToolbox.cpp
[ 97%] Linking CXX executable OrthancWSIDicomToTiff
/usr/bin/cmake -E cmake_link_script CMakeFiles/OrthancWSIDicomToTiff.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-ld.bfd: /usr/lib/gcc/x86_64-linux-gnu/15/../../../../lib/libOrthancFramework.a(SystemToolbox.cpp.o): in function `Orthanc::SystemToolbox::GetPathToExecutable()':
(.text+0x1670): undefined reference to `boost::filesystem::detail::absolute(boost::filesystem::path const&, boost::filesystem::path const&, boost::system::error_code*)'
/usr/bin/x86_64-linux-gnu-ld.bfd: /usr/lib/gcc/x86_64-linux-gnu/15/../../../../lib/libOrthancFramework.a(SystemToolbox.cpp.o): in function `Orthanc::SystemToolbox::GetDirectoryOfExecutable()':
(.text+0x17a6): undefined reference to `boost::filesystem::detail::absolute(boost::filesystem::path const&, boost::filesystem::path const&, boost::system::error_code*)'
collect2: error: ld returned 1 exit status
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fs [too-long-redacted] e -lcrypto -lz -lopenjp2 -ltiff
make[4]: *** [CMakeFiles/OrthancWSIDicomToTiff.dir/build.make:121: OrthancWSIDicomToTiff] Error 1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/BuildApplications'
make[3]: *** [CMakeFiles/Makefile2:160: CMakeFiles/OrthancWSIDicomToTiff.dir/all] Error 2
make[3]: *** Waiting for unfinished jobs....
[100%] Linking CXX executable OrthancWSIDicomizer
/usr/bin/cmake -E cmake_link_script CMakeFiles/OrthancWSIDicomizer.dir/link.txt --verbose=1
/usr/bin/x86_64-linux-gnu-ld.bfd: /usr/lib/gcc/x86_64-linux-gnu/15/../../../../lib/libOrthancFramework.a(SystemToolbox.cpp.o): in function `Orthanc::SystemToolbox::GetPathToExecutable()':
(.text+0x1670): undefined reference to `boost::filesystem::detail::absolute(boost::filesystem::path const&, boost::filesystem::path const&, boost::system::error_code*)'
/usr/bin/x86_64-linux-gnu-ld.bfd: /usr/lib/gcc/x86_64-linux-gnu/15/../../../../lib/libOrthancFramework.a(SystemToolbox.cpp.o): in function `Orthanc::SystemToolbox::GetDirectoryOfExecutable()':
(.text+0x17a6): undefined reference to `boost::filesystem::detail::absolute(boost::filesystem::path const&, boost::filesystem::path const&, boost::system::error_code*)'
collect2: error: ld returned 1 exit status
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fs [too-long-redacted] e -lcrypto -lz -lopenjp2 -ltiff
make[4]: *** [CMakeFiles/OrthancWSIDicomizer.dir/build.make:121: OrthancWSIDicomizer] Error 1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/BuildApplications'
make[3]: *** [CMakeFiles/Makefile2:128: CMakeFiles/OrthancWSIDicomizer.dir/all] Error 2
make[3]: Leaving directory '/<<PKGBUILDDIR>>/BuildApplications'
make[2]: *** [Makefile:139: all] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>/BuildApplications'
dh_auto_build: error: cd BuildApplications && make -j2 INSTALL="install --strip-program=true" VERBOSE=1 returned exit code 2
make[1]: *** [debian/rules:57: override_dh_auto_build] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:15: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2
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