[Debian-med-packaging] Processed: reassign 1131584 to src:gradle, forcibly merging 1108566 1131584

Debian Bug Tracking System owner at bugs.debian.org
Sun Mar 29 14:31:03 BST 2026


Processing commands for control at bugs.debian.org:

> reassign 1131584 src:gradle 4.4.1-22
Bug #1131584 [src:picard-tools] picard-tools: FTBFS: Test: Test method testCleanSam[1](simple_overhang.sam, 99M1S)(picard.sam.CleanSamTest) produced standard out/err: Ignoring SAM validation error: ERROR::CIGAR_MAPS_OFF_REFERENCE:Read name simple_overhang, Read CIGAR M operator maps off end of reference
Bug reassigned from package 'src:picard-tools' to 'src:gradle'.
No longer marked as found in versions picard-tools/3.4.0+dfsg-1.
Ignoring request to alter fixed versions of bug #1131584 to the same values previously set
Bug #1131584 [src:gradle] picard-tools: FTBFS: Test: Test method testCleanSam[1](simple_overhang.sam, 99M1S)(picard.sam.CleanSamTest) produced standard out/err: Ignoring SAM validation error: ERROR::CIGAR_MAPS_OFF_REFERENCE:Read name simple_overhang, Read CIGAR M operator maps off end of reference
Marked as found in versions gradle/4.4.1-22.
> forcemerge 1108566  1131584
Bug #1108566 [src:gradle] gradle:  FTBFS with default Java 25
Bug #1131584 [src:gradle] picard-tools: FTBFS: Test: Test method testCleanSam[1](simple_overhang.sam, 99M1S)(picard.sam.CleanSamTest) produced standard out/err: Ignoring SAM validation error: ERROR::CIGAR_MAPS_OFF_REFERENCE:Read name simple_overhang, Read CIGAR M operator maps off end of reference
Removed indication that 1131584 affects src:picard-tools
Added tag(s) patch.
Merged 1108566 1131584
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
1108566: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1108566
1131584: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1131584
Debian Bug Tracking System
Contact owner at bugs.debian.org with problems



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