[Debian-med-packaging] Bug#1151713: ITP: libgssw -- graph SIMD Smith-Waterman C library

Andreas Tille tille at debian.org
Fri Oct 23 11:17:48 BST 2026


Package: wnpp
Severity: wishlist

Subject: ITP: libgssw -- graph SIMD Smith-Waterman C library
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist

* Package name    : libgssw
  Version         : 0.0~git20211210.14b4d43
  Upstream Author : Boston College
* URL             : https://github.com/vgteam/gssw
* License         : MIT
  Programming Lang: C
  Description     : graph SIMD Smith-Waterman C library
 GSSW is a generalization of the striped Smith-Waterman algorithm to graphs.
 It is used by the vg toolkit for partial order alignment and supports affine
 gap penalties, traceback across graph nodes, pinned alignments and a bonus
 for full-length alignments.
 .
 This package contains the shared library.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/libgssw



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