[Debian-med-packaging] pplacer_1.1~alpha19-9_source.changes ACCEPTED into unstable

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Accepted:

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Format: 1.8
Date: Thu, 24 Sep 2026 11:53:45 +0200
Source: pplacer
Architecture: source
Version: 1.1~alpha19-9
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Changed-By: Andreas Tille <tille at debian.org>
Closes: 1074546 1131241
Changes:
 pplacer (1.1~alpha19-9) unstable; urgency=medium
 .
   * Fix Build issues with OCaml 5.2.0
      - Use -Wno-incompatible-pointer-types
      - Fix misleading indentation
      - Upgrade to Ocaml 5.2.0 API of bigarray
   * Build against the OCaml bindings for the current MCL version
     (libmcl-ocaml-dev) instead of the frozen mcl14 fork.  The OCaml
     bindings have been re-enabled in the mcl package against MCL 22-282,
     so the mcl14 package can be dropped from Debian.  This keeps the
     "guppy mcl" subcommand and the "--mcl" option of "guppy compress"
     working.
   * Build-Depends: s/ocaml-nox/ocaml/ since ocaml-nox was removed from
     Debian (Closes: #1131241).
   * Replace the removed Array.create with Array.make and build mutable
     buffers with Bytes.create instead of String.create (OCaml 5.2+), which
     is needed now that the build gets past dependency resolution against
     the re-enabled OCaml bindings of the current mcl package.
   * Build-Depends: add libtingea-dev.  The current mcl OCaml bindings
     record -ltingea in mcl.cmxa, so pplacer needs the tINGea development
     files to link.
   * caml_bigarray.patch: use Caml_ba_data_val (the bigarray data pointer)
     instead of Caml_ba_array_val (the bigarray struct pointer) in the C
     stubs, which had been operating on the bigarray header.  This was
     causing wrong likelihood values and heap corruption that surfaced as
     test failures and segfaults.  gemmish_c also passed the struct pointer
     to Caml_ba_data_val, yielding the flags field as the data pointer.
   * New patch marshal_header_size.patch: OCaml reduced Marshal.header_size
     from 20 to 16 bytes.  pplacer hardcoded the 20-byte header, so the
     -j N (default 2) forked placement workers deadlocked because the
     parent read 4 bytes of the data into the "header" and then waited for
     body bytes that never arrived.  Use Marshal.header_size/total_size.
   * Do not strip debug symbols from library
   * Finally libmcl-ocaml-dev is ported to latest mcl version
     Closes: #1074546
   * Standards-Version: 4.7.4 (routine-update)
   * Reflow Uploaders field (cme)
   * Remove Priority field (cme)
   * Remove trailing whitespace in debian/changelog (routine-update)
   * Drop 'Rules-Requires-Root: no' from d/control (routine-update)
   * Reformat the Last-Update date as ISO YYYY-MM-DD.
   * Set upstream metadata fields: Repository-Browse.
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Files:
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