[Debian-pan-maintainers] Bug#1123139: genx: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.14 3.13" --dir genx returned exit code 13
Santiago Vila
sanvila at debian.org
Tue Dec 16 19:43:29 GMT 2025
Package: src:genx
Version: 3.7.13+dfsg-1
Severity: serious
Tags: ftbfs forky sid
Dear maintainer:
During a rebuild of all packages in unstable, this package failed to build.
Below you will find the last part of the build log (probably the most
relevant part, but not necessarily). If required, the full build log
is available here:
https://people.debian.org/~sanvila/build-logs/202512/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you cannot reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:genx, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean --buildsystem=pybuild --sourcedirectory=genx
dh_auto_clean -O--buildsystem=pybuild -O--sourcedirectory=genx
pybuild --clean -i python{version} -p "3.14 3.13" --dir genx
rm -rf .pybuild/
find . -name \*.pyc -exec rm {} \;
dh_autoreconf_clean -O--buildsystem=pybuild -O--sourcedirectory=genx
dh_clean -O--buildsystem=pybuild -O--sourcedirectory=genx
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/python3-genx.substvars debian/files
rm -fr -- debian/python3-genx/ debian/tmp/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
[... snipped ...]
adding 'genx/models/databases/f1f2_nist/na.nff'
adding 'genx/models/databases/f1f2_nist/nb.nff'
adding 'genx/models/databases/f1f2_nist/nd.nff'
adding 'genx/models/databases/f1f2_nist/ne.nff'
adding 'genx/models/databases/f1f2_nist/ni.nff'
adding 'genx/models/databases/f1f2_nist/o.nff'
adding 'genx/models/databases/f1f2_nist/os.nff'
adding 'genx/models/databases/f1f2_nist/p.nff'
adding 'genx/models/databases/f1f2_nist/pa.nff'
adding 'genx/models/databases/f1f2_nist/pb.nff'
adding 'genx/models/databases/f1f2_nist/pd.nff'
adding 'genx/models/databases/f1f2_nist/pm.nff'
adding 'genx/models/databases/f1f2_nist/po.nff'
adding 'genx/models/databases/f1f2_nist/pr.nff'
adding 'genx/models/databases/f1f2_nist/pt.nff'
adding 'genx/models/databases/f1f2_nist/ra.nff'
adding 'genx/models/databases/f1f2_nist/rb.nff'
adding 'genx/models/databases/f1f2_nist/re.nff'
adding 'genx/models/databases/f1f2_nist/rh.nff'
adding 'genx/models/databases/f1f2_nist/rn.nff'
adding 'genx/models/databases/f1f2_nist/ru.nff'
adding 'genx/models/databases/f1f2_nist/s.nff'
adding 'genx/models/databases/f1f2_nist/sb.nff'
adding 'genx/models/databases/f1f2_nist/sc.nff'
adding 'genx/models/databases/f1f2_nist/se.nff'
adding 'genx/models/databases/f1f2_nist/si.nff'
adding 'genx/models/databases/f1f2_nist/sm.nff'
adding 'genx/models/databases/f1f2_nist/sn.nff'
adding 'genx/models/databases/f1f2_nist/sr.nff'
adding 'genx/models/databases/f1f2_nist/ta.nff'
adding 'genx/models/databases/f1f2_nist/tb.nff'
adding 'genx/models/databases/f1f2_nist/tc.nff'
adding 'genx/models/databases/f1f2_nist/te.nff'
adding 'genx/models/databases/f1f2_nist/th.nff'
adding 'genx/models/databases/f1f2_nist/ti.nff'
adding 'genx/models/databases/f1f2_nist/tl.nff'
adding 'genx/models/databases/f1f2_nist/tm.nff'
adding 'genx/models/databases/f1f2_nist/u.nff'
adding 'genx/models/databases/f1f2_nist/v.nff'
adding 'genx/models/databases/f1f2_nist/w.nff'
adding 'genx/models/databases/f1f2_nist/xe.nff'
adding 'genx/models/databases/f1f2_nist/y.nff'
adding 'genx/models/databases/f1f2_nist/yb.nff'
adding 'genx/models/databases/f1f2_nist/zn.nff'
adding 'genx/models/databases/f1f2_nist/zr.nff'
adding 'genx/models/databases/geant4/g4xs_B.txt'
adding 'genx/models/databases/geant4/g4xs_B10.txt'
adding 'genx/models/databases/geant4/g4xs_B11.txt'
adding 'genx/models/databases/geant4/g4xs_Cd.txt'
adding 'genx/models/databases/geant4/g4xs_Cd106.txt'
adding 'genx/models/databases/geant4/g4xs_Cd108.txt'
adding 'genx/models/databases/geant4/g4xs_Cd110.txt'
adding 'genx/models/databases/geant4/g4xs_Cd111.txt'
adding 'genx/models/databases/geant4/g4xs_Cd112.txt'
adding 'genx/models/databases/geant4/g4xs_Cd113.txt'
adding 'genx/models/databases/geant4/g4xs_Cd114.txt'
adding 'genx/models/databases/geant4/g4xs_Cd116.txt'
adding 'genx/models/databases/geant4/g4xs_Gd.txt'
adding 'genx/models/databases/geant4/g4xs_Gd152.txt'
adding 'genx/models/databases/geant4/g4xs_Gd154.txt'
adding 'genx/models/databases/geant4/g4xs_Gd155.txt'
adding 'genx/models/databases/geant4/g4xs_Gd156.txt'
adding 'genx/models/databases/geant4/g4xs_Gd157.txt'
adding 'genx/models/databases/geant4/g4xs_Gd158.txt'
adding 'genx/models/databases/geant4/g4xs_Gd160.txt'
adding 'genx/models/databases/geant4/g4xs_Li.txt'
adding 'genx/models/databases/geant4/g4xs_Li6.txt'
adding 'genx/models/databases/geant4/g4xs_Li7.txt'
adding 'genx/models/lib/__init__.py'
adding 'genx/models/lib/ables.py'
adding 'genx/models/lib/base.py'
adding 'genx/models/lib/edm_slicing.py'
adding 'genx/models/lib/elfield.py'
adding 'genx/models/lib/footprint.py'
adding 'genx/models/lib/grating.py'
adding 'genx/models/lib/instrument.py'
adding 'genx/models/lib/instrument_numba.py'
adding 'genx/models/lib/int_lay_xmean.py'
adding 'genx/models/lib/island_lattice.py'
adding 'genx/models/lib/isotropic_matrix.py'
adding 'genx/models/lib/materials.py'
adding 'genx/models/lib/math_utils.py'
adding 'genx/models/lib/neutron_cuda.py'
adding 'genx/models/lib/neutron_numba.py'
adding 'genx/models/lib/neutron_refl.py'
adding 'genx/models/lib/numba_integration.py'
adding 'genx/models/lib/offspec.py'
adding 'genx/models/lib/parameters.py'
adding 'genx/models/lib/paratt.py'
adding 'genx/models/lib/paratt_cuda.py'
adding 'genx/models/lib/paratt_numba.py'
adding 'genx/models/lib/physical_constants.py'
adding 'genx/models/lib/refl_base.py'
adding 'genx/models/lib/resolution.py'
adding 'genx/models/lib/scatteringlengths.py'
adding 'genx/models/lib/sm_hayter_mook.py'
adding 'genx/models/lib/stratified_base.py'
adding 'genx/models/lib/surface_scattering.py'
adding 'genx/models/lib/testing.py'
adding 'genx/models/lib/xmcd_moment.py'
adding 'genx/models/lib/xrmr.py'
adding 'genx/plugins/__init__.py'
adding 'genx/plugins/add_on_framework.py'
adding 'genx/plugins/data_loader_framework.py'
adding 'genx/plugins/data_loader_wx.py'
adding 'genx/plugins/utils.py'
adding 'genx/plugins/add_ons/Exporter.py'
adding 'genx/plugins/add_ons/FrequencyAnalysis.py'
adding 'genx/plugins/add_ons/LayerGraphics.py'
adding 'genx/plugins/add_ons/MagSLD.py'
adding 'genx/plugins/add_ons/ParameterVault.py'
adding 'genx/plugins/add_ons/Reflectivity.py'
adding 'genx/plugins/add_ons/SXRD.py'
adding 'genx/plugins/add_ons/Shell.py'
adding 'genx/plugins/add_ons/SimpleLayer.py'
adding 'genx/plugins/add_ons/SimpleReflectivity.py'
adding 'genx/plugins/add_ons/SpinAsymmetry.py'
adding 'genx/plugins/add_ons/Test.py'
adding 'genx/plugins/add_ons/UserFuncs.py'
adding 'genx/plugins/add_ons/__init__.py'
adding 'genx/plugins/add_ons/help_modules/__init__.py'
adding 'genx/plugins/add_ons/help_modules/atom_colors.py'
adding 'genx/plugins/add_ons/help_modules/atom_viewer.py'
adding 'genx/plugins/add_ons/help_modules/custom_dialog.py'
adding 'genx/plugins/add_ons/help_modules/frequency_analysis.py'
adding 'genx/plugins/add_ons/help_modules/materials_db.py'
adding 'genx/plugins/add_ons/help_modules/model_interactors.py'
adding 'genx/plugins/add_ons/help_modules/reflectivity_gui.py'
adding 'genx/plugins/add_ons/help_modules/reflectivity_images.py'
adding 'genx/plugins/add_ons/help_modules/reflectivity_misc.py'
adding 'genx/plugins/add_ons/help_modules/reflectivity_sample_plot.py'
adding 'genx/plugins/add_ons/help_modules/reflectivity_utils.py'
adding 'genx/plugins/add_ons/help_modules/sxrd_images.py'
adding 'genx/plugins/add_ons/help_modules/wxVTKRenderWindow.py'
adding 'genx/plugins/data_loaders/__init__.py'
adding 'genx/plugins/data_loaders/amor.py'
adding 'genx/plugins/data_loaders/auto.py'
adding 'genx/plugins/data_loaders/bruker.py'
adding 'genx/plugins/data_loaders/d17_cosmos.py'
adding 'genx/plugins/data_loaders/d17_legacy.py'
adding 'genx/plugins/data_loaders/default.py'
adding 'genx/plugins/data_loaders/gsecars_ctr.py'
adding 'genx/plugins/data_loaders/orso.py'
adding 'genx/plugins/data_loaders/resolution.py'
adding 'genx/plugins/data_loaders/rigaku.py'
adding 'genx/plugins/data_loaders/seifert_nja.py'
adding 'genx/plugins/data_loaders/sinq_six.py'
adding 'genx/plugins/data_loaders/sls_sxrd.py'
adding 'genx/plugins/data_loaders/sns_mr.py'
adding 'genx/plugins/data_loaders/specloader.py'
adding 'genx/plugins/data_loaders/xrdml.py'
adding 'genx/plugins/data_loaders/help_modules/__init__.py'
adding 'genx/plugins/data_loaders/help_modules/orso_analyzer.py'
adding 'genx/plugins/data_loaders/help_modules/spec.py'
adding 'genx/profiles/AdvancedReflectivity.conf'
adding 'genx/profiles/Empty.conf'
adding 'genx/profiles/SimpleReflectivity.conf'
adding 'genx/profiles/SurfaceXRD.conf'
adding 'genx/profiles/default.profile'
adding 'genx/remote/__init__.py'
adding 'genx/remote/controller.py'
adding 'genx/remote/messaging.py'
adding 'genx/remote/optimizer.py'
adding 'genx3-3.7.13.dist-info/licenses/LICENSE.txt'
adding 'genx3-3.7.13.dist-info/METADATA'
adding 'genx3-3.7.13.dist-info/WHEEL'
adding 'genx3-3.7.13.dist-info/entry_points.txt'
adding 'genx3-3.7.13.dist-info/top_level.txt'
adding 'genx3-3.7.13.dist-info/RECORD'
removing build/bdist.linux-x86_64/wheel
Successfully built genx3-3.7.13-py3-none-any.whl
I: pybuild plugin_pyproject:155: Unpacking wheel built for python3.13 with "installer" module
dh_auto_test -O--buildsystem=pybuild -O--sourcedirectory=genx
pybuild --test --test-pytest -i python{version} -p "3.14 3.13" --dir genx
I: pybuild base:317: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build; python3.14 -m pytest tests
============================= test session starts ==============================
platform linux -- Python 3.14.2, pytest-9.0.2, pluggy-1.6.0
rootdir: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build
configfile: pyproject.toml
plugins: typeguard-4.4.4
collected 71 items / 3 errors
==================================== ERRORS ====================================
___________________ ERROR collecting tests/test_examples.py ____________________
tests/test_examples.py:10: in <module>
from genx import api
genx/api.py:22: in <module>
controller = ModelController(DiffEv())
^^^^^^^^
genx/diffev.py:149: in __init__
GenxOptimizer.__init__(self)
genx/core/config.py:343: in __init__
hints = get_type_hints(self)
^^^^^^^^^^^^^^^^^^^^
/usr/lib/python3.14/typing.py:2401: in get_type_hints
hints = _lazy_annotationlib.get_annotations(obj, format=format)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/lib/python3.14/annotationlib.py:996: in get_annotations
raise TypeError(f"{obj!r} does not have annotations")
^^^^^^^
genx/solver_basis.py:100: in __repr__
for gname, group in self.opt.groups.items():
^^^^^^^^
E AttributeError: 'DiffEv' object has no attribute 'opt'
____________________ ERROR collecting tests/test_models.py _____________________
tests/test_models.py:10: in <module>
from genx import api
genx/api.py:22: in <module>
controller = ModelController(DiffEv())
^^^^^^^^
genx/diffev.py:149: in __init__
GenxOptimizer.__init__(self)
genx/core/config.py:343: in __init__
hints = get_type_hints(self)
^^^^^^^^^^^^^^^^^^^^
/usr/lib/python3.14/typing.py:2401: in get_type_hints
hints = _lazy_annotationlib.get_annotations(obj, format=format)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/lib/python3.14/annotationlib.py:996: in get_annotations
raise TypeError(f"{obj!r} does not have annotations")
^^^^^^^
genx/solver_basis.py:100: in __repr__
for gname, group in self.opt.groups.items():
^^^^^^^^
E AttributeError: 'DiffEv' object has no attribute 'opt'
______________ ERROR collecting tests/test_plugins_dataloaders.py ______________
tests/test_plugins_dataloaders.py:8: in <module>
from genx import api
genx/api.py:22: in <module>
controller = ModelController(DiffEv())
^^^^^^^^
genx/diffev.py:149: in __init__
GenxOptimizer.__init__(self)
genx/core/config.py:343: in __init__
hints = get_type_hints(self)
^^^^^^^^^^^^^^^^^^^^
/usr/lib/python3.14/typing.py:2401: in get_type_hints
hints = _lazy_annotationlib.get_annotations(obj, format=format)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/lib/python3.14/annotationlib.py:996: in get_annotations
raise TypeError(f"{obj!r} does not have annotations")
^^^^^^^
genx/solver_basis.py:100: in __repr__
for gname, group in self.opt.groups.items():
^^^^^^^^
E AttributeError: 'DiffEv' object has no attribute 'opt'
=========================== short test summary info ============================
ERROR tests/test_examples.py - AttributeError: 'DiffEv' object has no attribu...
ERROR tests/test_models.py - AttributeError: 'DiffEv' object has no attribute...
ERROR tests/test_plugins_dataloaders.py - AttributeError: 'DiffEv' object has...
!!!!!!!!!!!!!!!!!!! Interrupted: 3 errors during collection !!!!!!!!!!!!!!!!!!!!
============================== 3 errors in 0.70s ===============================
E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=2: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14/build; python3.14 -m pytest tests
I: pybuild base:317: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build; python3.13 -m pytest tests
============================= test session starts ==============================
platform linux -- Python 3.13.11, pytest-9.0.2, pluggy-1.6.0
rootdir: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13/build
configfile: pyproject.toml
plugins: typeguard-4.4.4
collected 74 items
tests/test_core_colors.py .. [ 2%]
tests/test_core_config.py ................. [ 25%]
tests/test_core_h5_support.py .. [ 28%]
tests/test_examples.py . [ 29%]
tests/test_model.py .... [ 35%]
tests/test_models.py . [ 36%]
tests/test_models_lib_base.py ....... [ 45%]
tests/test_models_lib_instrument.py .......ss [ 58%]
tests/test_models_lib_numba_equivalency.py ssssssssssssssssssssssssss [ 93%]
tests/test_models_lib_refl_base.py .... [ 98%]
tests/test_plugins_dataloaders.py . [100%]
======================== 46 passed, 28 skipped in 3.35s ========================
rm -fr -- /tmp/dh-xdg-rundir-KNRetqKu
dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.14 3.13" --dir genx returned exit code 13
make: *** [debian/rules:13: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
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