[Debian-pan-maintainers] Bug#1139518: orange-spectroscopy: FTBFS: failing tests

Santiago Vila sanvila at debian.org
Tue Jun 9 11:29:55 BST 2026 

Package: src:orange-spectroscopy
Version: 0.9.2-1
Severity: serious
Tags: ftbfs forky sid

Dear maintainer:

During a rebuild of all packages in unstable, this package failed to build.

Below you will find the last part of the build log (probably the most
relevant part, but not necessarily). If required, the full build log
is available here:

https://people.debian.org/~sanvila/build-logs/202606/

About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.

If you cannot reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:orange-spectroscopy, so that this is still
visible in the BTS web page for this package.

Thanks.

--------------------------------------------------------------------------------
[...]
 debian/rules clean
dh clean --with sphinxdoc --buildsystem=pybuild
   dh_auto_clean -O--buildsystem=pybuild
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
 debian/rules binary
dh binary --with sphinxdoc --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
   dh_auto_build -O--buildsystem=pybuild
I: pybuild plugin_pyproject:142: Building wheel for python3.14 with "build" module
I: pybuild base:385: python3.14 -m build --skip-dependency-check --no-isolation --wheel --outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_orange-spectroscopy  
* Building wheel...
/usr/lib/python3/dist-packages/setuptools/config/setupcfg.py:294: _DeprecatedConfig: Deprecated config in `setup.cfg`

[... snipped ...]

  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/utils/__init__.py:70: RuntimeWarning: invalid value encountered in cast
    return np.round(positions).astype(int), np.isnan(positions)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owhyper.py: 6 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owhyper.py: 6 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/widgets/owhyper.py:793: RuntimeWarning: Mean of empty slice
    cols[int(i / bin_sz), int(j / bin_sz)] = np.nanmean(

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py: 16 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpeakfit.py: 16 warnings
  /usr/lib/python3/dist-packages/lmfit/jsonutils.py:30: DeprecationWarning: Please import `gaussian` from the `scipy.signal.windows` namespace; the `scipy.signal.windows.windows` namespace is deprecated and will be removed in SciPy 2.0.0.
    t = getattr(module, oname, None)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py: 34 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpolar.py: 10 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpeakfit.py: 34 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpolar.py: 10 warnings
  /usr/lib/python3.13/multiprocessing/popen_fork.py:67: DeprecationWarning: This process (pid=2663) is multi-threaded, use of fork() may lead to deadlocks in the child.
    self.pid = os.fork()

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py: 18 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpeakfit.py: 18 warnings
  /usr/lib/python3/dist-packages/uncertainties/core.py:526: FutureWarning: AffineScalarFunc.error_components() is currently an instance method. This method is deprecated. In a future release it will be replaced with an instance property by the same name. It will be accessed by AffineScalarFunc.error_components (with no parentheses).
    return float(sqrt(sum(delta**2 for delta in self.error_components().values())))

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py: 18 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpeakfit.py: 18 warnings
  /usr/lib/python3/dist-packages/uncertainties/core.py:491: FutureWarning: AffineScalarFunc.derivatives() is deprecated. It will be removed in a future release.
    for variable, derivative in self.derivatives.items():

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py::TestOWPeakFit::test_allint_indv
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpeakfit.py::TestOWPeakFit::test_allint_indv
  /usr/lib/python3/dist-packages/asteval/asteval.py:922: RuntimeWarning: overflow encountered in exp
    out = func(*args, **keywords)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpeakfit.py::TestOWPeakFit::test_allint_indv
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpeakfit.py::TestOWPeakFit::test_allint_indv
  /usr/lib/python3/dist-packages/asteval/astutils.py:263: RuntimeWarning: invalid value encountered in scalar subtract
    ast.Sub: lambda a, b: a - b,

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpls.py: 22 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpls.py: 22 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/models/pls.py:47: UserWarning: _PLSCommonTransform should define __eq__ and __hash__ to be used for compute_shared
    super().__init__(transform)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpls.py: 22 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpls.py: 22 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/models/pls.py:83: UserWarning: PLSProjector should define __eq__ and __hash__ to be used for compute_value
  or set InheritEq = True if inherited methods suffice
    return ContinuousVariable(name, compute_value=PLSProjector(transformer, i))

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpls.py: 20 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpls.py: 20 warnings
  /usr/lib/python3/dist-packages/orangewidget/gui.py:2070: UserWarning: decorate OWPLS.apply with @gui.deferred and then explicitly call apply.now or apply.deferred.
    warnings.warn(

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpolar.py: 13 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpolar.py: 13 warnings
  /usr/lib/python3/dist-packages/orangewidget/utils/listview.py:119: DeprecationWarning: ListViewSearch is deprecated and will be removed in upcoming releases. Use ListViewFilter instead.
    warnings.warn(("ListViewSearch is deprecated and will be removed " + "in upcoming releases. Use ListViewFilter instead."),

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py: 6 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 11 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpreprocess.py: 6 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 11 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:50: UserWarning: _PCAReconstructCommon should define __eq__ and __hash__ to be used for compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py: 7 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 10 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpreprocess.py: 7 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 10 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:50: UserWarning: _ShiftAndScaleCommon should define __eq__ and __hash__ to be used for compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py: 6 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 6 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpreprocess.py: 6 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 6 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:50: UserWarning: _MNFCommon should define __eq__ and __hash__ to be used for compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py: 7 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py: 21 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpreprocess.py: 7 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_xas.py: 21 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:50: UserWarning: _XASnormalizationCommon should define __eq__ and __hash__ to be used for compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py: 4 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py: 11 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpreprocess.py: 4 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_xas.py: 11 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:50: UserWarning: _ExtractEXAFSCommon should define __eq__ and __hash__ to be used for compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py::TestAllPreprocessors::test_allpreproc_indv_empty
.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestPCADenoising::test_no_samples
.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestMNFDenoising::test_no_samples
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpreprocess.py::TestAllPreprocessors::test_allpreproc_indv_empty
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestPCADenoising::test_no_samples
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestMNFDenoising::test_no_samples
  /usr/lib/python3/dist-packages/Orange/data/table.py:219: UserWarning: <class 'numpy.ndarray'> must return a column, not 2d array
    warnings.warn(err)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owpreprocess.py::TestAllPreprocessors::test_allpreproc_indv_empty
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owpreprocess.py::TestAllPreprocessors::test_allpreproc_indv_empty
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/widgets/preprocessors/atm_corr.py:153: RuntimeWarning: All-NaN slice encountered
    self.preview_data_max = np.nanmax(spectra_mean(data.X))

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owsnr.py::TestOWSNR::test_zero_size_data
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owsnr.py::TestOWSNR::test_zero_size_data
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/widgets/owsnr.py:124: RuntimeWarning: divide by zero encountered in divide
    bottleneck.nanmean(array, axis=0) / bottleneck.nanstd(array, axis=0)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owsnr.py::TestOWSNR::test_zero_size_data
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owsnr.py::TestOWSNR::test_zero_size_data
  /usr/lib/python3/dist-packages/Orange/data/table.py:2472: RuntimeWarning: Array contains infinity.
    warnings.warn("Array contains infinity.", RuntimeWarning)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_owspectralseries.py: 15 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owspectralseries.py: 15 warnings
  /usr/lib/python3/dist-packages/Orange/widgets/gui.py:483: DeprecationWarning: Argument 'valueType' is deprecated and ignored
    warnings.warn("Argument 'valueType' is deprecated and ignored",

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 52 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 52 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:50: UserWarning: _SpSubtractCommon should define __eq__ and __hash__ to be used for compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 5 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 5 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:101: RuntimeWarning: divide by zero encountered in divide
    transd = data.X / ref_X

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestTransmittance::test_no_infs
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestTransmittance::test_no_infs
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:101: RuntimeWarning: invalid value encountered in divide
    transd = data.X / ref_X

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 5 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 5 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:37: RuntimeWarning: divide by zero encountered in log10
    np.log10(absd, absd)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestAbsorbance::test_no_infs
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestAbsorbance::test_no_infs
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:42: RuntimeWarning: divide by zero encountered in log10
    absd = np.log10(data.X)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 6 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 6 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:36: RuntimeWarning: divide by zero encountered in divide
    absd = ref_X / data.X

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestAbsorbance::test_no_infs
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestAbsorbance::test_no_infs
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/transform.py:36: RuntimeWarning: invalid value encountered in divide
    absd = ref_X / data.X

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestNormalize::test_no_infs
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestNormalize::test_no_infs
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/__init__.py:446: RuntimeWarning: invalid value encountered in divide
    data.X /= norm_data.X

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestNormalize::test_no_infs
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestNormalize::test_no_infs
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/__init__.py:466: RuntimeWarning: invalid value encountered in divide
    data.X = data.X / (max - min)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 5 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 5 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/__init__.py:521: RuntimeWarning: divide by zero encountered in divide
    return replace_infs(data.X / ref_X)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py: 52 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py: 52 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/utils.py:50: UserWarning: _NormalizePhaseReferenceCommon should define __eq__ and __hash__ to be used for compute_shared
    super().__init__(commonfn)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_preprocess.py::TestNormalizeReference::test_no_infs
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_preprocess.py::TestNormalizeReference::test_no_infs
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/preprocess/__init__.py:521: RuntimeWarning: invalid value encountered in divide
    return replace_infs(data.X / ref_X)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_readers.py::TestOmnicMapReader::test_read
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_readers.py::TestOmnicMapReader::test_read
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/utils/pymca5/OmnicMap.py:148: RuntimeWarning: invalid value encountered in scalar divide
    deltaY = (yPositions[-1] - yPositions[0]) / (self.__nFiles - 1)

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_tile_reader.py: 6 warnings
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_tile_reader.py: 6 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/widgets/owtilefile.py:139: DeprecationWarning: 'addSpace' has been deprecated. Use gui.separator instead.
    vbox = gui.radioButtons(

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py::TestXASnormalization::test_no_infs
.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py::TestXASnormalization::test_no_infs
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_xas.py::TestXASnormalization::test_no_infs
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_xas.py::TestXASnormalization::test_no_infs
  /usr/lib/python3/dist-packages/extranormal3/normal_xas.py:83: RuntimeWarning: invalid value encountered in divide
    return numpy.array((spectrum[1]-preedge_fitcurve[1]-flattening)/norm_const), norm_const

.pybuild/cpython3_3.13_orange-spectroscopy/build/orangecontrib/spectroscopy/tests/test_xas.py::TestExtractEXAFS::test_file
.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_xas.py::TestExtractEXAFS::test_file
  /usr/lib/python3/dist-packages/extranormal3/extra_exafs.py:96: RuntimeWarning: divide by zero encountered in divide
    sigma=1./k_interp**kweight

.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_irfft.py::TestIRFFT::test_agilent_fft_ab
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_irfft.py:105: RuntimeWarning: invalid value encountered in log10
    ab = np.log10(rsc / ssc)

.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_irfft.py::TestIRFFT::test_multi_ab
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_irfft.py:146: RuntimeWarning: invalid value encountered in log10
    ab = np.log10(rsc / ssc)

.pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owalignstack.py::test_image
  /usr/lib/python3/dist-packages/_pytest/python.py:170: PytestReturnNotNoneWarning: Test functions should return None, but .pybuild/cpython3_3.13_orange-spectroscopy/build/tests/test_owalignstack.py::test_image returned <class 'numpy.ndarray'>.
  Did you mean to use `assert` instead of `return`?
  See https://docs.pytest.org/en/stable/how-to/assert.html#return-not-none for more information.
    warnings.warn(

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
=========================== short test summary info ============================
SUBFAILED[AtmCorr(reference=[[0.117, 0.119, 0.118, 0.119, 0.122, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] orangecontrib/spectroscopy/tests/test_atm_corr.py::TestAtmCorr::test_all_nans - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.251, 0.306, 0.218, 0.119, 0.352, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] orangecontrib/spectroscopy/tests/test_atm_corr.py::TestAtmCorr::test_all_nans - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[?, ?, ?, 0.119, 0.122, ... | ?]
], correct_ranges=[(1300, 2100)], smooth_win=5)] orangecontrib/spectroscopy/tests/test_atm_corr.py::TestAtmCorr::test_all_nans - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.251, 0.306, ?, 0.119, 0.352, ... | ?]
], correct_ranges=[(1300, 2100)], smooth_win=5)] orangecontrib/spectroscopy/tests/test_atm_corr.py::TestAtmCorr::test_all_nans - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.117, 0.119, 0.118, 0.119, 0.122, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] orangecontrib/spectroscopy/tests/test_atm_corr.py::TestAtmCorr::test_all_nans - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.000, 0.119, 0.118, 0.119, 0.122, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] orangecontrib/spectroscopy/tests/test_atm_corr.py::TestAtmCorr::test_all_nans - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.117, 0.119, 0.118, 0.119, 0.122, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] orangecontrib/spectroscopy/tests/test_atm_corr.py::TestAtmCorr::test_no_infs - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.251, 0.306, 0.218, 0.119, 0.352, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] orangecontrib/spectroscopy/tests/test_atm_corr.py::TestAtmCorr::test_no_infs - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[?, ?, ?, 0.119, 0.122, ... | ?]
], correct_ranges=[(1300, 2100)], smooth_win=5)] orangecontrib/spectroscopy/tests/test_atm_corr.py::TestAtmCorr::test_no_infs - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.251, 0.306, ?, 0.119, 0.352, ... | ?]
], correct_ranges=[(1300, 2100)], smooth_win=5)] orangecontrib/spectroscopy/tests/test_atm_corr.py::TestAtmCorr::test_no_infs - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.117, 0.119, 0.118, 0.119, 0.122, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] orangecontrib/spectroscopy/tests/test_atm_corr.py::TestAtmCorr::test_no_infs - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.000, 0.119, 0.118, 0.119, 0.122, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] orangecontrib/spectroscopy/tests/test_atm_corr.py::TestAtmCorr::test_no_infs - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.117, 0.119, 0.118, 0.119, 0.122, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] tests/test_atm_corr.py::TestAtmCorr::test_all_nans - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.251, 0.306, 0.218, 0.119, 0.352, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] tests/test_atm_corr.py::TestAtmCorr::test_all_nans - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[?, ?, ?, 0.119, 0.122, ... | ?]
], correct_ranges=[(1300, 2100)], smooth_win=5)] tests/test_atm_corr.py::TestAtmCorr::test_all_nans - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.251, 0.306, ?, 0.119, 0.352, ... | ?]
], correct_ranges=[(1300, 2100)], smooth_win=5)] tests/test_atm_corr.py::TestAtmCorr::test_all_nans - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.117, 0.119, 0.118, 0.119, 0.122, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] tests/test_atm_corr.py::TestAtmCorr::test_all_nans - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.000, 0.119, 0.118, 0.119, 0.122, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] tests/test_atm_corr.py::TestAtmCorr::test_all_nans - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.117, 0.119, 0.118, 0.119, 0.122, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] tests/test_atm_corr.py::TestAtmCorr::test_no_infs - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.251, 0.306, 0.218, 0.119, 0.352, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] tests/test_atm_corr.py::TestAtmCorr::test_no_infs - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[?, ?, ?, 0.119, 0.122, ... | ?]
], correct_ranges=[(1300, 2100)], smooth_win=5)] tests/test_atm_corr.py::TestAtmCorr::test_no_infs - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.251, 0.306, ?, 0.119, 0.352, ... | ?]
], correct_ranges=[(1300, 2100)], smooth_win=5)] tests/test_atm_corr.py::TestAtmCorr::test_no_infs - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.117, 0.119, 0.118, 0.119, 0.122, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] tests/test_atm_corr.py::TestAtmCorr::test_no_infs - ValueError: array must not contain infs or NaNs
SUBFAILED[AtmCorr(reference=[[0.000, 0.119, 0.118, 0.119, 0.122, ... | collagen]
], correct_ranges=[(1300, 2100)], smooth_win=5)] tests/test_atm_corr.py::TestAtmCorr::test_no_infs - ValueError: array must not contain infs or NaNs
= 24 failed, 1652 passed, 462 skipped, 192 deselected, 1512 warnings, 2652 subtests passed in 178.76s (0:02:58) =
Widgets left: 0    Max widgets: 9173 

E: pybuild pybuild:485: test: plugin pyproject failed with: exit code=1: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_orange-spectroscopy/build; python3.13 -m pytest --verbosity=2 -k "not Mixin"
dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.14 3.13" --parallel=2 returned exit code 13
make: *** [debian/rules:7: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2
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