Bug#614491: slicer: FTBFS: itkConceptChecking.h:681: error: conversion from 'itk::Concept::Detail::UniqueType_bool<true>' to non-scalar type 'itk::Concept::Detail::UniqueType_bool<false>' requested

Lucas Nussbaum lucas at lucas-nussbaum.net
Mon Feb 21 22:34:08 UTC 2011 

Source: slicer
Version: 3.4.0~svn10438-7
Severity: serious
Tags: squeeze sid
User: debian-qa at lists.debian.org
Usertags: qa-ftbfs-20110221 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part:
> make[3]: Entering directory `/build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/DEB_build_shared'
> [  4%] Building CXX object Modules/Meshing/IO/CMakeFiles/mimxMeshIO.dir/vtkMimxAbaqusFileWriter.o
> [  4%] Building CXX object Libs/Qdec/CMakeFiles/Qdec.dir/QdecGlmFitResults.o
> [  4%] Building CXX object Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSSurfaceWFileReader.o
> [  4%] Building CXX object Libs/Qdec/CMakeFiles/Qdec.dir/QdecSubject.o
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Modules/Meshing/IO/vtkMimxAbaqusFileWriter.cxx: In member function 'void vtkMimxAbaqusFileWriter::WriteBoundaryConditions(std::ostream&, vtkUnstructuredGrid*)':
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Modules/Meshing/IO/vtkMimxAbaqusFileWriter.cxx:673: warning: 'static float vtkMath::DegreesToRadians()' is deprecated (declared at /usr/include/vtk-5.6/vtkMath.h:946)
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Modules/Meshing/IO/vtkMimxAbaqusFileWriter.cxx:688: warning: 'static float vtkMath::DegreesToRadians()' is deprecated (declared at /usr/include/vtk-5.6/vtkMath.h:946)
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Modules/Meshing/IO/vtkMimxAbaqusFileWriter.cxx:703: warning: 'static float vtkMath::DegreesToRadians()' is deprecated (declared at /usr/include/vtk-5.6/vtkMath.h:946)
> make[3]: *** No rule to make target `/usr/lib/libmysqlclient.so', needed by `bin/libQdec.so.3.4.0'.  Stop.
> make[3]: *** Waiting for unfinished jobs....
> [  4%] [  4%] Building CXX object Libs/Qdec/CMakeFiles/Qdec.dir/QdecUtilities.o
> Building CXX object Modules/Meshing/IO/CMakeFiles/mimxMeshIO.dir/vtkMimxIntervertebralDiscAbaqusWriter.o
> [  4%] Linking CXX shared library ../../bin/libModuleDescriptionParser.so
> Building CXX object Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSSurfaceLabelReader.o
> make[3]: Leaving directory `/build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/DEB_build_shared'
> make[2]: *** [Libs/Qdec/CMakeFiles/Qdec.dir/all] Error 2
> make[2]: *** Waiting for unfinished jobs....
> [  4%] Building CXX object Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSLookupTable.o
> [  4%] Building CXX object Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSIOTcl.o
> make[3]: Leaving directory `/build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/DEB_build_shared'
> [  4%] Built target ModuleDescriptionParser
> [  4%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTeemEstimateDiffusionTensor.o
> [  4%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKArchetypeImageSeriesVectorReaderSeries.o
> [  4%] Building CXX object Modules/Meshing/IO/CMakeFiles/mimxMeshIO.dir/vtkPluginFilterWatcher.o
> [  5%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKImageWriter.o
> [  5%] Building CXX object Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSSurfaceReaderTcl.o
> make[3]: *** No rule to make target `/usr/lib/libmysqlclient.so', needed by `bin/libmimxMeshIO.so.3.4.0'.  Stop.
> make[3]: *** Waiting for unfinished jobs....
> [  5%] Building CXX object Modules/Meshing/IO/CMakeFiles/mimxMeshIO.dir/ModuleProcessInformation.o
> [  5%] Building CXX object Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSSurfaceAnnotationReaderTcl.o
> [  5%] Building CXX object Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSSurfaceScalarReaderTcl.o
> make[2]: make[3]: Leaving directory `/build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/DEB_build_shared'
> *** [Modules/Meshing/IO/CMakeFiles/mimxMeshIO.dir/all] Error 2
> [  5%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkDiffusionTensorGlyph.o
> [  5%] Building CXX object Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSSurfaceWFileReaderTcl.o
> [  5%] Building CXX object Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSSurfaceLabelReaderTcl.o
> make[3]: *** No rule to make target `/usr/lib/libmysqlclient.so', needed by `bin/libFreeSurfer.so.3.4.0'.  Stop.
> make[3]: *** Waiting for unfinished jobs....
> [  5%] [  6%] Building CXX object Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/vtkFSLookupTableTcl.o
> Building CXX object Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/FreeSurferInit.o
> [  6%] [  6%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkPolyDataTensorToColor.o
> Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkBSplineInterpolateImageFunction.o
> [  6%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKGradientAnisotropicDiffusionImageFilter.o
> [  6%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkHyperPointandArray.o
> make[3]: Leaving directory `/build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/DEB_build_shared'
> make[2]: *** [Libs/FreeSurfer/CMakeFiles/FreeSurfer.dir/all] Error 2
> [  6%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKDistanceTransform.o
> [  6%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkHyperStreamlineDTMRI.o
> [  6%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkHyperStreamlineTeem.o
> [  6%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkPreciseHyperStreamline.o
> [  6%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkPreciseHyperStreamlinePoints.o
> [  6%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkSeedTracts.o
> [  6%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTensorImplicitFunctionToFunctionSet.o
> [  6%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTractographyPointAndArray.o
> [  6%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTensorMask.o
> [  6%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKLevelTracingImageFilter.o
> [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTensorRotate.o
> [  7%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKLevelTracing3DImageFilter.o
> [  7%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKWandImageFilter.o
> [  7%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKNewOtsuThresholdImageFilter.o
> [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkImageLabelCombine.o
> [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkNRRDReaderTcl.o
> [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkNRRDWriterTcl.o
> [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkDiffusionTensorMathematicsTcl.o
> [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkDiffusionTensorMathematicsSimpleTcl.o
> [  7%] [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTeemEstimateDiffusionTensorTcl.o
> Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkDiffusionTensorGlyphTcl.o
> [  7%] [  7%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKBSplineTransform.o
> Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkPolyDataTensorToColorTcl.o
> [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkBSplineInterpolateImageFunctionTcl.o
> [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkHyperStreamlineDTMRITcl.o
> [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkHyperStreamlineTeemTcl.o
> [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkPreciseHyperStreamlineTcl.o
> [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkPreciseHyperStreamlinePointsTcl.o
> [  7%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKTimeSeriesDatabase.o
> [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkSeedTractsTcl.o
> [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTensorImplicitFunctionToFunctionSetTcl.o
> [  7%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTensorMaskTcl.o
> [  8%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKIslandMath.o
> [  8%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTensorRotateTcl.o
> [  8%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkImageLabelCombineTcl.o
> make[3]: *** No rule to make target `/usr/lib/libmysqlclient.so', needed by `bin/libvtkTeem.so.3.4.0'.  Stop.
> make[3]: *** Waiting for unfinished jobs....
> [  9%] Building CXX object Libs/vtkTeem/CMakeFiles/vtkTeem.dir/vtkTeemInit.o
> [  9%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKArchetypeImageSeriesReaderTcl.o
> make[2]: *** [Libs/vtkTeem/CMakeFiles/vtkTeem.dir/all] Error 2
> make[3]: Leaving directory `/build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/DEB_build_shared'
> [  9%] [  9%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKArchetypeImageSeriesScalarReaderTcl.o
> Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKArchetypeImageSeriesVectorReaderFileTcl.o
> In file included from /usr/include/InsightToolkit/Common/itkMath.h:28,
>                  from /usr/include/InsightToolkit/Common/itkIndex.h:24,
>                  from /usr/include/InsightToolkit/Common/itkImageRegion.h:25,
>                  from /usr/include/InsightToolkit/Common/itkImageBase.h:25,
>                  from /usr/include/InsightToolkit/Common/itkImage.h:20,
>                  from /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Libs/vtkITK/vtkITKIslandMath.cxx:23:
> /usr/include/InsightToolkit/Common/itkConceptChecking.h: In member function 'void itk::Concept::IsInteger<T>::Constraints::constraints() [with T = double]':
> /usr/include/InsightToolkit/Common/itkConceptChecking.h:686:   instantiated from 'itk::Concept::IsInteger<double>'
> /usr/include/InsightToolkit/BasicFilters/itkConnectedComponentImageFilter.h:140:   instantiated from 'itk::ConnectedComponentImageFilter<itk::Image<double, 3u>, itk::Image<double, 3u>, itk::Image<double, 3u> >'
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Libs/vtkITK/vtkITKIslandMath.cxx:108:   instantiated from 'void vtkITKIslandMathExecute(vtkITKIslandMath*, vtkImageData*, vtkImageData*, T*, T*) [with T = vtkITKIslandMath::SimpleExecute::VTK_TT]'
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Libs/vtkITK/vtkITKIslandMath.cxx:171:   instantiated from here
> /usr/include/InsightToolkit/Common/itkConceptChecking.h:681: error: conversion from 'itk::Concept::Detail::UniqueType_bool<true>' to non-scalar type 'itk::Concept::Detail::UniqueType_bool<false>' requested
> /usr/include/InsightToolkit/Common/itkConceptChecking.h: In member function 'void itk::Concept::IsInteger<T>::Constraints::constraints() [with T = float]':
> /usr/include/InsightToolkit/Common/itkConceptChecking.h:686:   instantiated from 'itk::Concept::IsInteger<float>'
> /usr/include/InsightToolkit/BasicFilters/itkConnectedComponentImageFilter.h:140:   instantiated from 'itk::ConnectedComponentImageFilter<itk::Image<float, 3u>, itk::Image<float, 3u>, itk::Image<float, 3u> >'
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Libs/vtkITK/vtkITKIslandMath.cxx:108:   instantiated from 'void vtkITKIslandMathExecute(vtkITKIslandMath*, vtkImageData*, vtkImageData*, T*, T*) [with T = vtkITKIslandMath::SimpleExecute::VTK_TT]'
> /build/user-slicer_3.4.0~svn10438-7-amd64-uqn7r8/slicer-3.4.0~svn10438/Libs/vtkITK/vtkITKIslandMath.cxx:172:   instantiated from here
> /usr/include/InsightToolkit/Common/itkConceptChecking.h:681: error: conversion from 'itk::Concept::Detail::UniqueType_bool<true>' to non-scalar type 'itk::Concept::Detail::UniqueType_bool<false>' requested
> [  9%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKArchetypeImageSeriesVectorReaderSeriesTcl.o
> [  9%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKImageWriterTcl.o
> [  9%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKImageToImageFilterTcl.o
> [  9%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKImageToImageFilter2DFFTcl.o
> [  9%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKImageToImageFilterFFTcl.o
> [  9%] [  9%] Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKImageToImageFilterFULTcl.o
> Building CXX object Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKImageToImageFilterULULTcl.o
> make[3]: *** [Libs/vtkITK/CMakeFiles/vtkITK.dir/vtkITKIslandMath.o] Error 1

The full build log is available from:
   http://people.debian.org/~lucas/logs/2011/02/21/slicer_3.4.0~svn10438-7_lsid64.buildlog

A list of current common problems and possible solutions is available at 
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on about 50 AMD64 nodes
of the Grid'5000 platform, using a clean chroot.  Internet was not
accessible from the build systems.

-- 
| Lucas Nussbaum
| lucas at lucas-nussbaum.net   http://www.lucas-nussbaum.net/ |
| jabber: lucas at nussbaum.fr             GPG: 1024D/023B3F4F |

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