Bug#610196: libatlas3gf-base: Illegal instruction ATL_dupNBmm0_1_0_b0 on amd64: AMD Opteron(tm) Processor 246

[Yaroslav Halchenko]

Package: libatlas3gf-base
Version: 3.8.3-27
Severity: normal


Reporting from another system...
While building python-nipy package, unittests puke due to:

Program received signal SIGILL, Illegal instruction.
[Switching to Thread 0x7fffec609710 (LWP 28102)]
0x00007ffff547552c in ATL_dupNBmm0_1_0_b0 () from /usr/lib/libblas.so.3gf

root at lego:~/nipy-0.1.2+20110114/debian# cat /proc/cpuinfo 
processor       : 0
vendor_id       : AuthenticAMD
cpu family      : 15
model           : 5
model name      : AMD Opteron(tm) Processor 246
stepping        : 8
cpu MHz         : 1993.597
cache size      : 1024 KB               
fpu             : yes
fpu_exception   : yes
cpuid level     : 1
wp              : yes
flags           : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 syscall nx mmxext lm 3dnowext 3dnow rep_good
bogomips        : 3987.19
TLB size        : 1024 4K pages
clflush size    : 64
cache_alignment : 64
address sizes   : 40 bits physical, 48 bits virtual
power management: ts ttp

processor       : 1
vendor_id       : AuthenticAMD
cpu family      : 15
model           : 5
model name      : AMD Opteron(tm) Processor 246
stepping        : 8
cpu MHz         : 1993.597
cache size      : 1024 KB
fpu             : yes
fpu_exception   : yes
cpuid level     : 1
wp              : yes
flags           : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 syscall nx mmxext lm 3dnowext 3dnow rep_good
bogomips        : 3987.52
TLB size        : 1024 4K pages
clflush size    : 64
cache_alignment : 64
address sizes   : 40 bits physical, 48 bits virtual
power management: ts ttp


-- System Information:
Debian Release: 6.0
  APT prefers testing
  APT policy: (900, 'testing'), (800, 'unstable'), (300, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 2.6.32-5-amd64 (SMP w/2 CPU cores)
Locale: LANG=en_US, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash

Versions of packages libatlas3gf-base depends on:
ii  libc6                         2.11.2-7   Embedded GNU C Library: Shared lib
ii  libgcc1                       1:4.4.5-8  GCC support library
ii  libgfortran3                  4.4.5-8    Runtime library for GNU Fortran ap

libatlas3gf-base recommends no packages.

Versions of packages libatlas3gf-base suggests:
ii  libblas3gf                    1.2-8      Basic Linear Algebra Reference imp
ii  liblapack3gf                  3.2.2-1.2  library of linear algebra routines

-- no debconf information