Bug#682591: /usr/lib/atlas-base/atlas/libblas.so.3.0: Illegal instruction ATL_dJIK56x56x56TN56x56x0_a1_b0 on amd64: AMD Opteron(tm) Processor 246

[NeuroDebian Team account]

Package: libatlas3-base
Version: 3.8.4-8
Severity: important
File: /usr/lib/atlas-base/atlas/libblas.so.3.0

Dear Maintainer,

Today I have upgraded the system and I guess moved from my custom build of atlas to Debian-provided and got my illops back:

Program received signal SIGILL, Illegal instruction.
0x00007ffff478e2fa in ATL_dJIK56x56x56TN56x56x0_a1_b0 () from /usr/lib/libblas.so.3gf
(gdb) bt 2 full
#0  0x00007ffff478e2fa in ATL_dJIK56x56x56TN56x56x0_a1_b0 () from /usr/lib/libblas.so.3gf
No symbol table info available.
#1  0x00007ffff486f546 in ATL_dprk_kmm () from /usr/lib/libblas.so.3gf
No symbol table info available.
(More stack frames follow...)


and here is atlas pkg actions from dpkg.log:

2012-07-23 14:56:54 status installed libatlas3gf-base:amd64 3.8.3-29.1~custom1+custom3
2012-07-23 14:56:54 remove libatlas3gf-base:amd64 3.8.3-29.1~custom1+custom3 <none>
2012-07-23 14:56:54 status half-configured libatlas3gf-base:amd64 3.8.3-29.1~custom1+custom3
2012-07-23 14:56:54 status half-installed libatlas3gf-base:amd64 3.8.3-29.1~custom1+custom3
2012-07-23 14:56:55 status config-files libatlas3gf-base:amd64 3.8.3-29.1~custom1+custom3
2012-07-23 14:56:55 status config-files libatlas3gf-base:amd64 3.8.3-29.1~custom1+custom3
2012-07-23 14:57:29 install libatlas3-base:amd64 <none> 3.8.4-8
2012-07-23 14:57:29 status half-installed libatlas3-base:amd64 3.8.4-8
2012-07-23 14:57:30 status unpacked libatlas3-base:amd64 3.8.4-8
2012-07-23 14:57:30 status unpacked libatlas3-base:amd64 3.8.4-8
2012-07-23 15:00:25 configure libatlas3-base:amd64 3.8.4-8 <none>
2012-07-23 15:00:25 status unpacked libatlas3-base:amd64 3.8.4-8
2012-07-23 15:00:25 status half-configured libatlas3-base:amd64 3.8.4-8
2012-07-23 15:00:25 status installed libatlas3-base:amd64 3.8.4-8


Please let me know what further information should I provide.

Thanks in advance

-- System Information:
Debian Release: wheezy/sid
  APT prefers unstable
  APT policy: (500, 'unstable')
Architecture: amd64 (x86_64)

Kernel: Linux 3.2.0-2-amd64 (SMP w/2 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

Versions of packages libatlas3-base depends on:
ii  libc6         2.13-35
ii  libgcc1       1:4.7.1-5
ii  libgfortran3  4.7.1-5

libatlas3-base recommends no packages.

Versions of packages libatlas3-base suggests:
ii  liblapack3  3.4.1-5

-- no debconf information