Bug#788382: vtk6: FTBFS with latest netcdf (1:4.3.3) in experimental

Ross Gammon rossgammon at mail.dk
Wed Jun 10 20:13:57 UTC 2015


Source: vtk6
Version: 6.2.0+dfsg1-1
Severity: important

Dear Maintainer,

Whilst testing reverse dependencies for the latest version of netcdf in
experimental, we found that vtk6 failed to build. dh_auto_configure fails as it
is unable to find netcdf. Here is hopefully the relevant part of the build log
(full buildlog attached):

-- Found HDF5: /usr/lib/x86_64-linux-
gnu/hdf5/serial/lib/libhdf5.so;/usr/lib/x86_64-linux-
gnu/libpthread.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-
gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-
gnu/hdf5/serial/lib/libhdf5_hl.so;/usr/lib/x86_64-linux-
gnu/hdf5/serial/lib/libhdf5.so;/usr/lib/x86_64-linux-
gnu/libpthread.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-
gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so
-- Failed to find NetCDF interface for CXX
CMake Error at CMake/FindPackageHandleStandardArgs.cmake:97 (MESSAGE):
  Could NOT find NetCDF (missing: NETCDF_HAS_INTERFACES)
Call Stack (most recent call first):
  CMake/FindPackageHandleStandardArgs.cmake:288 (_FPHSA_FAILURE_MESSAGE)
  CMake/FindNetCDF.cmake:117 (find_package_handle_standard_args)
  CMake/vtkModuleMacros.cmake:830 (find_package)
  ThirdParty/netcdf/CMakeLists.txt:10 (vtk_module_third_party)

Regards,

Ross




-- System Information:
Debian Release: jessie/sid
  APT prefers utopic-updates
  APT policy: (500, 'utopic-updates'), (500, 'utopic-security'), (500, 'utopic'), (100, 'utopic-backports')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 3.16.0-38-generic (SMP w/4 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
-------------- next part --------------
dpkg-checkbuilddeps: Unmet build dependencies: doxygen-latex ftgl-dev gnuplot-nox hdf5-tools libalglib-dev libavcodec-dev libavformat-dev libavutil-dev libboost-all-dev libgl2ps-dev libglew-dev libjsoncpp-dev libmrmpi-dev libogg-dev libosmesa6-dev libqt5opengl5-dev libqt5webkit5-dev libswscale-dev libtheora-dev libutfcpp-dev libxdmf-dev libxpm-dev mpi-default-dev python-autobahn python-mpi4py python-twisted qtbase5-dev qttools5-private-dev r-base r-base-core r-base-dev tcl-dev texlive-math-extra tk-dev
W: Unmet build-dependency in source
dpkg-buildpackage: source package vtk6
dpkg-buildpackage: source version 6.2.0+dfsg1-1~exp1
dpkg-buildpackage: source distribution experimental
dpkg-buildpackage: source changed by Anton Gladky <gladk at debian.org>
 dpkg-source --before-build vtk6-6.2.0+dfsg1
dpkg-checkbuilddeps: Unmet build dependencies: doxygen-latex ftgl-dev gnuplot-nox hdf5-tools libalglib-dev libavcodec-dev libavformat-dev libavutil-dev libboost-all-dev libgl2ps-dev libglew-dev libjsoncpp-dev libmrmpi-dev libogg-dev libosmesa6-dev libqt5opengl5-dev libqt5webkit5-dev libswscale-dev libtheora-dev libutfcpp-dev libxdmf-dev libxpm-dev mpi-default-dev python-autobahn python-mpi4py python-twisted qtbase5-dev qttools5-private-dev r-base r-base-core r-base-dev tcl-dev texlive-math-extra tk-dev
dpkg-buildpackage: warning: build dependencies/conflicts unsatisfied; aborting
dpkg-buildpackage: warning: (Use -d flag to override.)
dpkg-buildpackage: warning: this is currently a non-fatal warning with -S, but will probably become fatal in the future
 fakeroot debian/rules clean
dh clean --buildsystem=cmake --builddirectory=/home/ross/debian/vtk6-6.2.0+dfsg1/debian/build --with python2 --with javahelper --parallel
   dh_testdir -O--buildsystem=cmake -O--builddirectory=/home/ross/debian/vtk6-6.2.0\+dfsg1/debian/build -O--parallel
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/home/ross/debian/vtk6-6.2.0+dfsg1'
dh_auto_clean
rm -rf /home/ross/debian/vtk6-6.2.0+dfsg1/debian/build
make[1]: Leaving directory '/home/ross/debian/vtk6-6.2.0+dfsg1'
   jh_clean -O--buildsystem=cmake -O--builddirectory=/home/ross/debian/vtk6-6.2.0\+dfsg1/debian/build -O--parallel
   dh_clean -O--buildsystem=cmake -O--builddirectory=/home/ross/debian/vtk6-6.2.0\+dfsg1/debian/build -O--parallel
 dpkg-source -b vtk6-6.2.0+dfsg1
dpkg-source: info: using source format `3.0 (quilt)'
dpkg-source: info: building vtk6 using existing ./vtk6_6.2.0+dfsg1.orig.tar.xz
dpkg-source: info: building vtk6 in vtk6_6.2.0+dfsg1-1~exp1.debian.tar.xz
dpkg-source: info: building vtk6 in vtk6_6.2.0+dfsg1-1~exp1.dsc
 dpkg-genchanges -S >../vtk6_6.2.0+dfsg1-1~exp1_source.changes
dpkg-genchanges: including full source code in upload
 dpkg-source --after-build vtk6-6.2.0+dfsg1
dpkg-buildpackage: full upload (original source is included)
W: /home/ross/.pbuilderrc does not exist
I: using fakeroot in build.
I: Current time: Wed Jun 10 20:41:04 CEST 2015
I: pbuilder-time-stamp: 1433961664
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/base.tgz]
I: creating local configuration
I: copying local configuration
I: mounting /proc filesystem
I: mounting /run/shm filesystem
I: mounting /dev/pts filesystem
I: policy-rc.d already exists
I: Obtaining the cached apt archive contents
I: Installing the build-deps
W: no hooks of type D found -- ignoring
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint at lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: chrpath, cmake (>= 2.8.5), debhelper (>= 9), default-jdk, dh-python, doxygen-latex, dpkg-dev (>= 1.16.1~), ftgl-dev, ghostscript, gnuplot-nox, graphviz, hdf5-tools, javahelper, libalglib-dev, libavcodec-dev, libavformat-dev, libavutil-dev, libboost-all-dev, libdigest-md5-perl, libexpat-dev, libfreetype6-dev, libgdal-dev, libgl1-mesa-dev | libgl-dev, libgl2ps-dev, libglew-dev, libglu1-mesa-dev | libglu-dev, libhdf5-dev, libjpeg-dev, libjsoncpp-dev, libmrmpi-dev, libmysqlclient-dev, libnetcdf-dev, libogg-dev, libosmesa6-dev, libpng-dev, libpq-dev, libqt5opengl5-dev, libqt5webkit5-dev, libsqlite3-dev, libswscale-dev, libtheora-dev, libtiff-dev, libutfcpp-dev, libx11-dev, libxdmf-dev, libxml2-dev, libxpm-dev, libxt-dev, mpi-default-dev, pkg-config, python-all-dev (<< 2.8), python-all-dev (>= 2.7), python-autobahn, python-matplotlib, python-mpi4py, python-six, python-twisted, qtbase5-dev, qttools5-private-dev, r-base, r-base-core, r-base-dev, tcl-dev, texlive-binaries, texlive-math-extra, tk-dev, x11proto-core-dev, xauth, xvfb, zlib1g-dev
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 12544 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on chrpath; however:
  Package chrpath is not installed.
 pbuilder-satisfydepends-dummy depends on cmake (>= 2.8.5); however:
  Package cmake is not installed.
 pbuilder-satisfydepends-dummy depends on debhelper (>= 9); however:
  Package debhelper is not installed.
 pbuilder-satisfydepends-dummy depends on default-jdk; however:
  Package default-jdk is not installed.
 pbuilder-satisfydepends-dummy depends on dh-python; however:
  Package dh-python is not installed.
 pbuilder-satisfydepends-dummy depends on doxygen-latex; however:
  Package doxygen-latex is not installed.
 pbuilder-satisfydepends-dummy depends on ftgl-dev; however:
  Package ftgl-dev is not installed.
 pbuilder-satisfydepends-dummy depends on ghostscript; however:
  Package ghostscript is not installed.
 pbuilder-satisfydepends-dummy depends on gnuplot-nox; however:
  Package gnuplot-nox is not installed.
 pbuil
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
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0 packages upgraded, 644 newly installed, 0 to remove and 0 not upgraded.
Need to get 0 B/445 MB of archives. After unpacking 1524 MB will be used.
The following packages have unmet dependencies:
 krb5-multidev : Depends: libkrb5-3 (= 1.12.1+dfsg-20) but 1.13.2+dfsg-1 is installed.
                 Depends: libk5crypto3 (= 1.12.1+dfsg-20) but 1.13.2+dfsg-1 is installed.
                 Depends: libgssapi-krb5-2 (= 1.12.1+dfsg-20) but 1.13.2+dfsg-1 is installed.
 libkrb5support0 : Breaks: libkadm5clnt-mit9 (< 1.13~alpha1-1) but 1.12.1+dfsg-20 is to be installed.
                   Breaks: libkadm5srv-mit9 (< 1.13~alpha1-1) but 1.12.1+dfsg-20 is to be installed.
                   Breaks: libkdb5-7 (< 1.13~alpha1-1) but 1.12.1+dfsg-20 is to be installed.
The following actions will resolve these dependencies:

     Downgrade the following packages:                                          
1)     libgssapi-krb5-2 [1.13.2+dfsg-1 (experimental, now) -> 1.12.1+dfsg-20 (un
2)     libk5crypto3 [1.13.2+dfsg-1 (experimental, now) -> 1.12.1+dfsg-20 (unstab
3)     libkrb5-3 [1.13.2+dfsg-1 (experimental, now) -> 1.12.1+dfsg-20 (unstable)
4)     libkrb5support0 [1.13.2+dfsg-1 (experimental, now) -> 1.12.1+dfsg-20 (uns



The following packages will be DOWNGRADED:
  libgssapi-krb5-2 libk5crypto3 libkrb5-3 libkrb5support0 
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0 packages upgraded, 644 newly installed, 4 downgraded, 0 to remove and 0 not upgraded.
Need to get 0 B/446 MB of archives. After unpacking 1524 MB will be used.
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Setting up liborc-0.4-0:amd64 (1:0.4.23-2) ...
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Setting up libdconf1:amd64 (0.24.0-2) ...
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Setting up libatk-bridge2.0-0:amd64 (2.16.0-1) ...
Setting up libpixman-1-0:amd64 (0.32.6-3) ...
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Setting up libtiff5:amd64 (4.0.3-13) ...
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Setting up libproxy1:amd64 (0.4.11-4+b2) ...
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Setting up mysql-common (5.5.43-0+deb8u1) ...
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Creating config file /etc/papersize with new version
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Setting up libgbm1:amd64 (10.5.5-1) ...
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Setting up libqt5network5:amd64 (5.3.2+dfsg-5) ...
Setting up libqt5sql5:amd64 (5.3.2+dfsg-5) ...
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Setting up libqt5quickwidgets5:amd64 (5.3.2-4) ...
Setting up libwebp5:amd64 (0.4.3-1.3) ...
Setting up libxslt1.1:amd64 (1.1.28-2+b2) ...
Setting up libqt5webkit5:amd64 (5.3.2+dfsg-4) ...
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Setting up libxcb1-dev:amd64 (1.10-3+b1) ...
Setting up libx11-dev:amd64 (2:1.6.3-1) ...
Setting up libdrm-dev:amd64 (2.4.60-3) ...
Setting up mesa-common-dev:amd64 (10.5.5-1) ...
Setting up libx11-xcb-dev:amd64 (2:1.6.3-1) ...
Setting up libxcb-dri3-dev:amd64 (1.10-3+b1) ...
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Setting up libxcb-randr0-dev:amd64 (1.10-3+b1) ...
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Setting up libxcb-sync-dev:amd64 (1.10-3+b1) ...
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Setting up libqt5webkit5-dev:amd64 (5.3.2+dfsg-4) ...
Setting up libschroedinger-1.0-0:amd64 (1.0.11-2.1) ...
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update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
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Setting up libunistring0:amd64 (0.9.3-5.2+b1) ...
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Setting up libva1:amd64 (1.5.1-2) ...
Setting up libxpm4:amd64 (1:3.5.11-1+b1) ...
Setting up libxaw7:amd64 (2:1.0.12-2+b1) ...
Setting up libxdmf2 (2.1.dfsg.1-11+b2) ...
Setting up libxerces-c3.1:amd64 (3.1.1-5.1) ...
Setting up libxfont1:amd64 (1:1.5.1-1) ...
Setting up libxft2:amd64 (2.3.2-1) ...
Setting up libxkbfile1:amd64 (1:1.0.8-1) ...
Setting up libxmuu1:amd64 (2:1.1.2-1) ...
Setting up libxss1:amd64 (1:1.2.2-1) ...
Setting up libxv1:amd64 (2:1.0.10-1+b1) ...
Setting up libxvidcore4:amd64 (2:1.3.3-1) ...
Setting up libxxf86dga1:amd64 (2:1.1.4-1+b1) ...
Setting up libzzip-0-13:amd64 (0.13.62-3) ...
Setting up openssl (1.0.2a-1) ...
Setting up ca-certificates (20150426) ...
Setting up java-common (0.52) ...
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Setting up python3.4-minimal (3.4.3-7) ...
Setting up libfreexl1:amd64 (1.0.1-2) ...
Setting up libkml0:amd64 (1.3.0~r864+git20131113-9b50572+dfsg1-1) ...
Setting up libsnappy1:amd64 (1.1.2-4) ...
Setting up file (1:5.22+15-2) ...
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Setting up chrpath (0.16-1) ...
Setting up tex-common (5.03) ...
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Setting up gettext (0.19.4-1) ...
Setting up intltool-debian (0.35.0+20060710.2) ...
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Setting up libatk-wrapper-java (0.33.0-2) ...
Setting up python3.4 (3.4.3-7) ...
Setting up python3-minimal (3.4.2-2) ...
Setting up libpython3-stdlib:amd64 (3.4.2-2) ...
Setting up doxygen (1.8.9.1-3) ...
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Setting up zlib1g-dev:amd64 (1:1.2.8.dfsg-2+b1) ...
Setting up libpng12-dev:amd64 (1.2.50-2+b2) ...
Setting up libfreetype6-dev (2.5.2-4) ...
Setting up libftgl-dev (2.1.3~rc5-4+nmu1) ...
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Setting up libgfortran-4.9-dev:amd64 (4.9.2-20) ...
Setting up gfortran-4.9 (4.9.2-20) ...
Setting up gfortran (4:4.9.2-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
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Setting up libvpx2:amd64 (1.4.0-3) ...
Setting up libgd3:amd64 (2.1.1-1) ...
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update-alternatives: using /usr/bin/gnuplot4-nox to provide /usr/bin/gnuplot (gnuplot) in auto mode
update-alternatives: using /usr/bin/gnuplot4-nox to provide /usr/bin/gnuplot4 (gnuplot4) in auto mode
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Setting up hdf5-helpers (1.8.13+docs-15) ...
Setting up hdf5-tools (1.8.13+docs-15) ...
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Setting up liblapack3 (3.5.0-4) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
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Setting up libavutil54:amd64 (6:11.4-2) ...
Setting up libavresample2:amd64 (6:11.4-2) ...
Setting up libopus0:amd64 (1.1-2) ...
Setting up libx264-146:amd64 (2:0.146.2538+git121396c-2) ...
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Setting up libavcodec56:amd64 (6:11.4-2) ...
Setting up libavutil-dev (6:11.4-2) ...
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update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
Setting up libboost1.55-dev:amd64 (1.55.0+dfsg-3) ...
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Setting up libboost-atomic1.55-dev:amd64 (1.55.0+dfsg-3) ...
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Setting up libboost-context1.55-dev:amd64 (1.55.0+dfsg-3) ...
Setting up libboost-context-dev:amd64 (1.55.0.2) ...
Setting up libboost-coroutine1.55-dev:amd64 (1.55.0+dfsg-3) ...
Setting up libboost-coroutine-dev (1.55.0.2) ...
Setting up libboost-serialization1.55-dev:amd64 (1.55.0+dfsg-3) ...
Setting up libboost-date-time1.55-dev:amd64 (1.55.0+dfsg-3) ...
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Setting up libboost-exception1.55-dev:amd64 (1.55.0+dfsg-3) ...
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Setting up libboost-system1.55-dev:amd64 (1.55.0+dfsg-3) ...
Setting up libboost-filesystem1.55-dev:amd64 (1.55.0+dfsg-3) ...
Setting up libboost-filesystem-dev:amd64 (1.55.0.2) ...
Setting up libboost-test1.55-dev:amd64 (1.55.0+dfsg-3) ...
Setting up libboost-graph1.55-dev:amd64 (1.55.0+dfsg-3) ...
Setting up libboost-graph-dev:amd64 (1.55.0.2) ...
Setting up libboost-graph-parallel1.55-dev (1.55.0+dfsg-3) ...
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Setting up libboost-regex1.55-dev:amd64 (1.55.0+dfsg-3) ...
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Setting up libboost-locale1.55-dev:amd64 (1.55.0+dfsg-3) ...
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Setting up libnuma-dev:amd64 (2.0.10-1) ...
Setting up libltdl-dev:amd64 (2.4.2-1.11) ...
Setting up libhwloc-dev:amd64 (1.10.1-1) ...
Setting up libopenmpi-dev (1.6.5-9.2) ...
update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode
Setting up mpi-default-dev (1.0.2+nmu2) ...
Setting up libboost-mpi1.55-dev (1.55.0+dfsg-3) ...
Setting up libboost-mpi-dev (1.55.0.2) ...
Setting up libboost-mpi-python1.55-dev (1.55.0+dfsg-3) ...
Setting up libboost-mpi-python-dev (1.55.0.2) ...
Setting up libboost-program-options1.55-dev:amd64 (1.55.0+dfsg-3) ...
Setting up libboost-program-options-dev:amd64 (1.55.0.2) ...
Setting up libpython-dev:amd64 (2.7.9-1) ...
Setting up python2.7-dev (2.7.10-2) ...
Setting up python-dev (2.7.9-1) ...
Setting up libboost-python1.55-dev (1.55.0+dfsg-3) ...
Setting up libboost-python-dev (1.55.0.2) ...
Setting up libboost-random1.55-dev:amd64 (1.55.0+dfsg-3) ...
Setting up libboost-random-dev:amd64 (1.55.0.2) ...
Setting up libboost-regex-dev:amd64 (1.55.0.2) ...
Setting up libboost-serialization-dev:amd64 (1.55.0.2) ...
Setting up libboost-signals1.55-dev:amd64 (1.55.0+dfsg-3) ...
Setting up libboost-signals-dev:amd64 (1.55.0.2) ...
Setting up libboost-system-dev:amd64 (1.55.0.2) ...
Setting up libboost-test-dev:amd64 (1.55.0.2) ...
Setting up libboost-thread-dev:amd64 (1.55.0.2) ...
Setting up libboost-timer1.55-dev:amd64 (1.55.0+dfsg-3) ...
Setting up libboost-timer-dev:amd64 (1.55.0.2) ...
Setting up libboost-wave1.55-dev:amd64 (1.55.0+dfsg-3) ...
Setting up libboost-wave-dev:amd64 (1.55.0.2) ...
Setting up libboost-all-dev (1.55.0.2) ...
Setting up libbz2-dev:amd64 (1.0.6-8) ...
Setting up libcurl4-gnutls-dev:amd64 (7.42.1-3) ...
Setting up libxml2-dev:amd64 (2.9.2+dfsg1-3) ...
Setting up uuid-dev:amd64 (2.26.2-6) ...
Setting up pkg-config (0.28-1) ...
Setting up libdap-dev:amd64 (3.12.0-1) ...
Setting up libfontconfig1-dev:amd64 (2.11.0-6.3) ...
Setting up libgeos-3.4.2 (3.4.2-7) ...
Setting up libgeos-c1 (3.4.2-7) ...
Setting up libgeos-dev (3.4.2-7) ...
Setting up libgif-dev (4.1.6-11) ...
Setting up libgl2ps0 (1.3.8-1.2) ...
Setting up libgl2ps-dev (1.3.8-1.2) ...
Setting up libglew-dev:amd64 (1.10.0-3) ...
Setting up libhdf5-cpp-8:amd64 (1.8.13+docs-15) ...
Setting up libjpeg62-turbo-dev:amd64 (1:1.4.0-7) ...
Setting up libjpeg-dev (1:1.4.0-7) ...
Setting up libhdf5-dev (1.8.13+docs-15) ...
update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up libice-dev:amd64 (2:1.0.9-1+b1) ...
Setting up libjasper-dev (1.900.1-debian1-2.4) ...
Setting up libjs-jquery-ui (1.10.1+dfsg-1) ...
Setting up liblapack-dev (3.5.0-4) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
Setting up liblzma-dev:amd64 (5.1.1alpha+20120614-2+b3) ...
Setting up libmrmpi-dev (1.0~20140404-1) ...
Setting up libmysqlclient-dev (5.5.43-0+deb8u1) ...
Setting up libtinfo-dev:amd64 (5.9+20150516-2) ...
Setting up libncurses5-dev:amd64 (5.9+20150516-2) ...
Setting up libnetcdfc7 (1:4.1.3-7.2) ...
Setting up libogg-dev:amd64 (1.3.2-1) ...
Setting up libosmesa6:amd64 (10.5.5-1) ...
Setting up libosmesa6-dev:amd64 (10.5.5-1) ...
Setting up libpcre16-3:amd64 (2:8.35-5) ...
Setting up libpcre32-3:amd64 (2:8.35-5) ...
Setting up libpcre3-dev:amd64 (2:8.35-5) ...
Setting up libpq5:amd64 (9.4.3-1) ...
Setting up libssl-dev:amd64 (1.0.2a-1) ...
Setting up libpq-dev (9.4.3-1) ...
Setting up proj-data (4.9.1-1) ...
Setting up libproj9 (4.9.1-1) ...
Setting up libpython-all-dev:amd64 (2.7.9-1) ...
Setting up libqt5opengl5-dev:amd64 (5.3.2+dfsg-5) ...
Setting up libreadline6-dev:amd64 (6.3-8+b3) ...
Setting up libreadline-dev:amd64 (6.3-8+b3) ...
Setting up libsm-dev:amd64 (2:1.2.2-1+b1) ...
Setting up libsqlite3-dev:amd64 (3.8.10.2-1) ...
Setting up libswscale3:amd64 (6:11.4-2) ...
Setting up libswscale-dev (6:11.4-2) ...
Setting up libtcl8.6:amd64 (8.6.4+dfsg-2) ...
Setting up libtheora-dev:amd64 (1.1.1+dfsg.1-6) ...
Setting up libjbig-dev:amd64 (2.1-3.1) ...
Setting up libtiffxx5:amd64 (4.0.3-13) ...
Setting up libtiff5-dev:amd64 (4.0.3-13) ...
Setting up libtk8.6:amd64 (8.6.4+dfsg-2) ...
Setting up libutfcpp-dev (2.3.4-1) ...
Setting up libxdmf-dev (2.1.dfsg.1-11+b2) ...
Setting up libxerces-c-dev (3.1.1-5.1) ...
Setting up x11proto-render-dev (2:0.11.1-2) ...
Setting up libxrender-dev:amd64 (1:0.9.8-1+b1) ...
Setting up libxft-dev (2.3.2-1) ...
Setting up libxpm-dev:amd64 (1:3.5.11-1+b1) ...
Setting up x11proto-scrnsaver-dev (1.2.2-1) ...
Setting up libxss-dev:amd64 (1:1.2.2-1) ...
Setting up libxt-dev:amd64 (1:1.1.4-1+b1) ...
Setting up python-all (2.7.9-1) ...
Setting up python-all-dev (2.7.9-1) ...
Setting up liblz4-1:amd64 (0.0~r130-1) ...
Setting up python-lz4 (0.7.0+dfsg-1) ...
Setting up python-msgpack (0.4.2-1) ...
Setting up python-snappy (0.5-1) ...
Setting up python-autobahn (0.10.3+dfsg1-2) ...
Setting up python-dateutil (2.2-2) ...
Setting up python-matplotlib-data (1.4.2-3.1) ...
Setting up python-pyparsing (2.0.3+dfsg1-1) ...
Setting up python-tz (2012c+dfsg-0.1) ...
Setting up python-numpy (1:1.8.2-2) ...
Setting up python-mock (1.0.1-3) ...
Setting up python-nose (1.3.6-1) ...
Setting up python-matplotlib (1.4.2-3.1) ...
Setting up qttools5-dev:amd64 (5.3.2-3) ...
Setting up qttools5-private-dev:amd64 (5.3.2-3) ...
Setting up zip (3.0-10) ...
Setting up unzip (6.0-17) ...
Setting up r-base-core (3.2.0-4) ...

Creating config file /etc/R/Renviron with new version
Setting up r-cran-boot (1.3-16-1) ...
Setting up r-cran-cluster (2.0.1-1) ...
Setting up r-cran-foreign (0.8.63-1) ...
Setting up r-cran-mass (7.3-40-1) ...
Setting up r-cran-kernsmooth (2.23-14-1) ...
Setting up r-cran-lattice (0.20-31-1) ...
Setting up r-cran-nlme (3.1.120-1) ...
Setting up r-cran-matrix (1.2-0-1) ...
Setting up r-cran-mgcv (1.8-6-1) ...
Setting up r-cran-survival (2.38-1-1) ...
Setting up r-cran-rpart (4.1-9-1) ...
Setting up r-cran-class (7.3-12-1) ...
Setting up r-cran-nnet (7.3-9-1) ...
Setting up r-cran-spatial (7.3-9-1) ...
Setting up r-cran-codetools (0.2-11-1) ...
Setting up r-recommended (3.2.0-4) ...
Setting up r-base (3.2.0-4) ...
Setting up r-base-dev (3.2.0-4) ...
Setting up tcl8.6 (8.6.4+dfsg-2) ...
Setting up tcl (8.6.0+8) ...
Setting up tcl8.6-dev:amd64 (8.6.4+dfsg-2) ...
Setting up tcl-dev:amd64 (8.6.0+8) ...
Setting up tk8.6 (8.6.4+dfsg-2) ...
Setting up tk (8.6.0+8) ...
Setting up tk8.6-dev:amd64 (8.6.4+dfsg-2) ...
Setting up tk-dev:amd64 (8.6.0+8) ...
Setting up x11-xkb-utils (7.7+2) ...
Setting up xauth (1:1.0.9-1) ...
Setting up xserver-common (2:1.17.1-2) ...
Setting up xvfb (2:1.17.1-2) ...
Setting up libalglib-dev (3.9.0-2) ...
Setting up libhdf4-0-alt (4.2.10-3.2) ...
Setting up libogdi3.2 (3.2.0~beta2-7.1+b1) ...
Setting up libspatialite5:amd64 (4.1.1-10+b1) ...
Setting up libwebpmux1:amd64 (0.4.3-1.3) ...
Setting up libwebpdemux1:amd64 (0.4.3-1.3) ...
Setting up libwebp-dev:amd64 (0.4.3-1.3) ...
Setting up libhdf4-alt-dev (4.2.10-3.2) ...
Setting up libspatialite-dev:amd64 (4.1.1-10+b1) ...
Setting up libjsoncpp-dev:amd64 (0.10.2-2) ...
Setting up python-mpi4py (1.3.1+hg20131106-2) ...
Setting up odbcinst (2.3.1-3) ...
Setting up odbcinst1debian2:amd64 (2.3.1-3) ...
Setting up ca-certificates-java (20140324) ...
done.
Setting up default-jre-headless (2:1.7-52) ...
Setting up libcupsfilters1:amd64 (1.0.68-2) ...
Setting up libcupsimage2:amd64 (1.7.5-12) ...
Setting up libgs9 (9.06~dfsg-2) ...
Setting up texlive-binaries (2014.20140926.35254-6) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Building format(s) --refresh.
	This may take some time... done.
Setting up texlive-base (2014.20141024-2) ...
/usr/bin/tl-paper: setting paper size for dvips to a4.
/usr/bin/tl-paper: setting paper size for dvipdfmx to a4.
/usr/bin/tl-paper: setting paper size for xdvi to a4.
/usr/bin/tl-paper: setting paper size for pdftex to a4.
Running mktexlsr. This may take some time... done.
Building format(s) --all.
	This may take some time... done.
Setting up dh-python (1.20141111-2) ...
Setting up python3 (3.4.2-2) ...
Setting up devscripts (2.15.4) ...
Setting up ghostscript (9.06~dfsg-2) ...
Setting up javahelper (0.50) ...
Setting up unixodbc (2.3.1-3) ...
Setting up libgdal1h (1.10.1+dfsg-8+b6) ...
Setting up unixodbc-dev (2.3.1-3) ...
Setting up libgdal-dev (1.10.1+dfsg-8+b6) ...
Setting up libgtk-3-common (3.14.5-1) ...
Setting up libgtk-3-0:amd64 (3.14.5-1) ...
Setting up libgtk-3-bin (3.14.5-1) ...
Setting up adwaita-icon-theme (3.16.2.1-2) ...
Setting up libatk-wrapper-java-jni:amd64 (0.33.0-2) ...
Processing triggers for tex-common (5.03) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up texlive-font-utils (2014.20141024-1) ...
Setting up texlive-fonts-recommended (2014.20141024-2) ...
Setting up texlive-latex-base (2014.20141024-2) ...
Running mktexlsr. This may take some time... done.
Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-latex-base.cnf.
	This may take some time... done.
Processing triggers for ca-certificates (20150426) ...
Updating certificates in /etc/ssl/certs...
180 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...

Adding debian:A-Trust-nQual-03.pem
Adding debian:ACCVRAIZ1.pem
Adding debian:ACEDICOM_Root.pem
Adding debian:AC_Raíz_Certicámara_S.A..pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AddTrust_External_Root.pem
Adding debian:AddTrust_Low-Value_Services_Root.pem
Adding debian:AddTrust_Public_Services_Root.pem
Adding debian:AddTrust_Qualified_Certificates_Root.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:ApplicationCA_-_Japanese_Government.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_CA_1.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_CA_1.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig.pem
Adding debian:CA_Disig_Root_R1.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:CNNIC_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:Camerfirma_Chambers_of_Commerce_Root.pem
Adding debian:Camerfirma_Global_Chambersign_Root.pem
Adding debian:Certigna.pem
Adding debian:Certinomis_-_Autorité_Racine.pem
Adding debian:Certplus_Class_2_Primary_CA.pem
Adding debian:Certum_Root_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Chambers_of_Commerce_Root_-_2008.pem
Adding debian:China_Internet_Network_Information_Center_EV_Certificates_Root.pem
Adding debian:ComSign_CA.pem
Adding debian:ComSign_Secured_CA.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:Comodo_Secure_Services_root.pem
Adding debian:Comodo_Trusted_Services_root.pem
Adding debian:Cybertrust_Global_Root.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DST_ACES_CA_X6.pem
Adding debian:DST_Root_CA_X3.pem
Adding debian:Deutsche_Telekom_Root_CA_2.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:Digital_Signature_Trust_Co._Global_CA_1.pem
Adding debian:Digital_Signature_Trust_Co._Global_CA_3.pem
Adding debian:E-Tugra_Certification_Authority.pem
Adding debian:EBG_Elektronik_Sertifika_Hizmet_Sağlayıcısı.pem
Adding debian:EC-ACC.pem
Adding debian:EE_Certification_Centre_Root_CA.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:Equifax_Secure_CA.pem
Adding debian:Equifax_Secure_Global_eBusiness_CA.pem
Adding debian:Equifax_Secure_eBusiness_CA_1.pem
Adding debian:GeoTrust_Global_CA.pem
Adding debian:GeoTrust_Global_CA_2.pem
Adding debian:GeoTrust_Primary_Certification_Authority.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem
Adding debian:GeoTrust_Universal_CA.pem
Adding debian:GeoTrust_Universal_CA_2.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R2.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:Global_Chambersign_Root_-_2008.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem
Adding debian:Hongkong_Post_Root_CA_1.pem
Adding debian:IGC_A.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Izenpe.com.pem
Adding debian:Juur-SK.pem
Adding debian:Microsec_e-Szigno_Root_CA.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:NetLock_Business_=Class_B=_Root.pem
Adding debian:NetLock_Express_=Class_C=_Root.pem
Adding debian:NetLock_Notary_=Class_A=_Root.pem
Adding debian:NetLock_Qualified_=Class_QA=_Root.pem
Adding debian:Network_Solutions_Certificate_Authority.pem
Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem
Adding debian:PSCProcert.pem
Adding debian:QuoVadis_Root_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:RSA_Security_2048_v3.pem
Adding debian:Root_CA_Generalitat_Valenciana.pem
Adding debian:S-TRUST_Authentication_and_Encryption_Root_CA_2005_PN.pem
Adding debian:S-TRUST_Universal_Root_CA.pem
Adding debian:SG_TRUST_SERVICES_RACINE.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_EV_RootCA1.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:Sonera_Class_1_Root_CA.pem
Adding debian:Sonera_Class_2_Root_CA.pem
Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem
Adding debian:Staat_der_Nederlanden_Root_CA.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:StartCom_Certification_Authority.pem
Adding debian:StartCom_Certification_Authority_2.pem
Adding debian:StartCom_Certification_Authority_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Platinum_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:Swisscom_Root_CA_1.pem
Adding debian:Swisscom_Root_CA_2.pem
Adding debian:Swisscom_Root_EV_CA_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TC_TrustCenter_Class_2_CA_II.pem
Adding debian:TC_TrustCenter_Class_3_CA_II.pem
Adding debian:TC_TrustCenter_Universal_CA_I.pem
Adding debian:TURKTRUST_Certificate_Services_Provider_Root_1.pem
Adding debian:TURKTRUST_Certificate_Services_Provider_Root_2.pem
Adding debian:TURKTRUST_Certificate_Services_Provider_Root_2007.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:Taiwan_GRCA.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:Trustis_FPS_Root_CA.pem
Adding debian:TÜBİTAK_UEKAE_Kök_Sertifika_Hizmet_Sağlayıcısı_-_Sürüm_3.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:UTN_DATACorp_SGC_Root_CA.pem
Adding debian:UTN_USERFirst_Email_Root_CA.pem
Adding debian:UTN_USERFirst_Hardware_Root_CA.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem
Adding debian:VeriSign_Universal_Root_Certification_Authority.pem
Adding debian:Verisign_Class_1_Public_Primary_Certification_Authority.pem
Adding debian:Verisign_Class_1_Public_Primary_Certification_Authority_-_G2.pem
Adding debian:Verisign_Class_1_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Verisign_Class_2_Public_Primary_Certification_Authority_-_G2.pem
Adding debian:Verisign_Class_2_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G2.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_2.pem
Adding debian:Verisign_Class_4_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Visa_eCommerce_Root.pem
Adding debian:WellsSecure_Public_Root_Certificate_Authority.pem
Adding debian:WoSign.pem
Adding debian:WoSign_China.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:thawte_Primary_Root_CA.pem
Adding debian:thawte_Primary_Root_CA_-_G2.pem
Adding debian:thawte_Primary_Root_CA_-_G3.pem
Adding debian:spi-cacert-2008.pem
done.
done.
Setting up openjdk-7-jre-headless:amd64 (7u79-2.5.5-1) ...
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/orbd to provide /usr/bin/orbd (orbd) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/servertool to provide /usr/bin/servertool (servertool) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/tnameserv to provide /usr/bin/tnameserv (tnameserv) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/jre/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up openjdk-7-jre:amd64 (7u79-2.5.5-1) ...
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/jre/bin/policytool to provide /usr/bin/policytool (policytool) in auto mode
Setting up default-jre (2:1.7-52) ...
Setting up openjdk-7-jdk:amd64 (7u79-2.5.5-1) ...
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/idlj to provide /usr/bin/idlj (idlj) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/wsimport to provide /usr/bin/wsimport (wsimport) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jsadebugd to provide /usr/bin/jsadebugd (jsadebugd) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/native2ascii to provide /usr/bin/native2ascii (native2ascii) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/javah to provide /usr/bin/javah (javah) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jhat to provide /usr/bin/jhat (jhat) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/xjc to provide /usr/bin/xjc (xjc) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/schemagen to provide /usr/bin/schemagen (schemagen) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/extcheck to provide /usr/bin/extcheck (extcheck) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/appletviewer to provide /usr/bin/appletviewer (appletviewer) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/wsgen to provide /usr/bin/wsgen (wsgen) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
Setting up default-jdk (2:1.7-52) ...
Processing triggers for tex-common (5.03) ...
Running mktexlsr. This may take some time... done.
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up texlive-math-extra (2014.20141024-1) ...
Running mktexlsr. This may take some time... done.
Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-math-extra.cnf.
	This may take some time... done.
Setting up texlive-latex-recommended (2014.20141024-2) ...
Setting up texlive-extra-utils (2014.20141024-1) ...
Processing triggers for tex-common (5.03) ...
Running mktexlsr. This may take some time... done.
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up cm-super-minimal (0.3.4-9) ...
Setting up texlive-pictures (2014.20141024-2) ...
Processing triggers for tex-common (5.03) ...
Running mktexlsr. This may take some time... done.
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up texlive-latex-extra (2014.20141024-1) ...
Processing triggers for tex-common (5.03) ...
Running mktexlsr. This may take some time... done.
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up doxygen-latex (1.8.9.1-3) ...
Processing triggers for libc-bin (2.19-18) ...
Processing triggers for systemd (220-5) ...
Processing triggers for libgdk-pixbuf2.0-0:amd64 (2.31.4-2) ...
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
Reading package lists...
Building dependency tree...
Reading state information...
apt-utils is already the newest version.
The following NEW packages will be installed:
  fakeroot libfakeroot
0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded.
Need to get 0 B/129 kB of archives.
After this operation, 434 kB of additional disk space will be used.
Selecting previously unselected package libfakeroot:amd64.
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(Reading database ... 70045 files and directories currently installed.)
Preparing to unpack .../libfakeroot_1.20.2-1_amd64.deb ...
Unpacking libfakeroot:amd64 (1.20.2-1) ...
Selecting previously unselected package fakeroot.
Preparing to unpack .../fakeroot_1.20.2-1_amd64.deb ...
Unpacking fakeroot (1.20.2-1) ...
Processing triggers for man-db (2.7.0.2-5) ...
Setting up libfakeroot:amd64 (1.20.2-1) ...
Setting up fakeroot (1.20.2-1) ...
update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode
I: Copying back the cached apt archive contents
I: Copying source file
I: copying [../vtk6_6.2.0+dfsg1-1~exp1.dsc]
I: copying [../vtk6_6.2.0+dfsg1.orig.tar.xz]
I: copying [../vtk6_6.2.0+dfsg1-1~exp1.debian.tar.xz]
I: Extracting source
dpkg-source: warning: extracting unsigned source package (vtk6_6.2.0+dfsg1-1~exp1.dsc)
dpkg-source: info: extracting vtk6 in vtk6-6.2.0+dfsg1
dpkg-source: info: unpacking vtk6_6.2.0+dfsg1.orig.tar.xz
dpkg-source: info: unpacking vtk6_6.2.0+dfsg1-1~exp1.debian.tar.xz
dpkg-source: info: applying allpatches.patch
dpkg-source: info: applying soversion-sharedlib.patch
dpkg-source: info: applying matplotlib.patch
dpkg-source: info: applying use_system_sqlite.patch
dpkg-source: info: applying fix_ftbfs_gcc49.patch
dpkg-source: info: applying use_system_utf8.patch
dpkg-source: info: applying use_system_mpi4py.patch
I: Building the package
W: no hooks of type A found -- ignoring
I: Running cd tmp/buildd/*/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin" dpkg-buildpackage -us -uc  -rfakeroot
dpkg-buildpackage: source package vtk6
dpkg-buildpackage: source version 6.2.0+dfsg1-1~exp1
dpkg-buildpackage: source distribution experimental
dpkg-buildpackage: source changed by Anton Gladky <gladk at debian.org>
 dpkg-source --before-build vtk6-6.2.0+dfsg1
dpkg-buildpackage: host architecture amd64
 fakeroot debian/rules clean
dh clean --buildsystem=cmake --builddirectory=/tmp/buildd/vtk6-6.2.0+dfsg1/debian/build --with python2 --with javahelper --parallel
   dh_testdir -O--buildsystem=cmake -O--builddirectory=/tmp/buildd/vtk6-6.2.0\+dfsg1/debian/build -O--parallel
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/tmp/buildd/vtk6-6.2.0+dfsg1'
dh_auto_clean
rm -rf /tmp/buildd/vtk6-6.2.0+dfsg1/debian/build
make[1]: Leaving directory '/tmp/buildd/vtk6-6.2.0+dfsg1'
   jh_clean -O--buildsystem=cmake -O--builddirectory=/tmp/buildd/vtk6-6.2.0\+dfsg1/debian/build -O--parallel
   dh_clean -O--buildsystem=cmake -O--builddirectory=/tmp/buildd/vtk6-6.2.0\+dfsg1/debian/build -O--parallel
 dpkg-source -b vtk6-6.2.0+dfsg1
dpkg-source: info: using source format '3.0 (quilt)'
dpkg-source: info: building vtk6 using existing ./vtk6_6.2.0+dfsg1.orig.tar.xz
dpkg-source: info: building vtk6 in vtk6_6.2.0+dfsg1-1~exp1.debian.tar.xz
dpkg-source: info: building vtk6 in vtk6_6.2.0+dfsg1-1~exp1.dsc
 debian/rules build
dh build --buildsystem=cmake --builddirectory=/tmp/buildd/vtk6-6.2.0+dfsg1/debian/build --with python2 --with javahelper --parallel
   dh_testdir -O--buildsystem=cmake -O--builddirectory=/tmp/buildd/vtk6-6.2.0\+dfsg1/debian/build -O--parallel
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/tmp/buildd/vtk6-6.2.0+dfsg1'
dh_auto_configure -- -DCMAKE_VERBOSE_MAKEFILE=ON -DBUILD_DOCUMENTATION=ON -DBUILD_EXAMPLES=ON -DBUILD_SHARED_LIBS=ON -DBUILD_TESTING=OFF -DVTK_USE_TK=ON -DVTK_WRAP_JAVA=ON -DVTK_WRAP_PYTHON=ON -DVTK_WRAP_TCL=ON -DVTK_USE_SYSTEM_EXPAT=ON -DVTK_USE_SYSTEM_FREETYPE=ON -DVTK_USE_SYSTEM_GL2PS=ON -DVTK_USE_SYSTEM_HDF5=ON -DVTK_USE_SYSTEM_JPEG=ON -DVTK_USE_SYSTEM_LIBXML2=ON -DVTK_USE_SYSTEM_OGGTHEORA=ON -DVTK_USE_SYSTEM_PNG=ON -DVTK_USE_SYSTEM_TIFF=ON -DVTK_USE_SYSTEM_ZLIB=ON -DVTK_USE_SYSTEM_JSONCPP=ON -DVTK_USE_SYSTEM_NETCDF=ON -DVTK_USE_SYSTEM_GLEW=ON -DVTK_EXTRA_COMPILER_WARNINGS=ON -DVTK_Group_Imaging=ON -DVTK_Group_MPI=ON -DVTK_Group_Qt=ON -DVTK_Group_Tk=ON -DVTK_Group_Views=ON -DVTK_BUILD_ALL_MODULES=ON -DMPI_CXX_INCLUDE_PATH="/usr/include/mpi" -DVTK_INSTALL_LIBRARY_DIR="/usr/lib/x86_64-linux-gnu" -DVTK_MAKE_INSTANTIATORS=ON -DCMAKE_EXE_LINKER_FLAGS="-Wl,--as-needed" -DCMAKE_MODULE_LINKER_FLAGS="-Wl,--as-needed" -DCMAKE_SHARED_LINKER_FLAGS="-Wl,--as-needed" -DCMAKE_BUILD_TYPE=None -DVTK_USE_GCC_VISIBILITY=ON  -DVTK_QT_VERSION=5
	cmake ../.. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_VERBOSE_MAKEFILE=ON -DBUILD_DOCUMENTATION=ON -DBUILD_EXAMPLES=ON -DBUILD_SHARED_LIBS=ON -DBUILD_TESTING=OFF -DVTK_USE_TK=ON -DVTK_WRAP_JAVA=ON -DVTK_WRAP_PYTHON=ON -DVTK_WRAP_TCL=ON -DVTK_USE_SYSTEM_EXPAT=ON -DVTK_USE_SYSTEM_FREETYPE=ON -DVTK_USE_SYSTEM_GL2PS=ON -DVTK_USE_SYSTEM_HDF5=ON -DVTK_USE_SYSTEM_JPEG=ON -DVTK_USE_SYSTEM_LIBXML2=ON -DVTK_USE_SYSTEM_OGGTHEORA=ON -DVTK_USE_SYSTEM_PNG=ON -DVTK_USE_SYSTEM_TIFF=ON -DVTK_USE_SYSTEM_ZLIB=ON -DVTK_USE_SYSTEM_JSONCPP=ON -DVTK_USE_SYSTEM_NETCDF=ON -DVTK_USE_SYSTEM_GLEW=ON -DVTK_EXTRA_COMPILER_WARNINGS=ON -DVTK_Group_Imaging=ON -DVTK_Group_MPI=ON -DVTK_Group_Qt=ON -DVTK_Group_Tk=ON -DVTK_Group_Views=ON -DVTK_BUILD_ALL_MODULES=ON -DMPI_CXX_INCLUDE_PATH=/usr/include/mpi -DVTK_INSTALL_LIBRARY_DIR=/usr/lib/x86_64-linux-gnu -DVTK_MAKE_INSTANTIATORS=ON -DCMAKE_EXE_LINKER_FLAGS=-Wl,--as-needed -DCMAKE_MODULE_LINKER_FLAGS=-Wl,--as-needed -DCMAKE_SHARED_LINKER_FLAGS=-Wl,--as-needed -DCMAKE_BUILD_TYPE=None -DVTK_USE_GCC_VISIBILITY=ON -DVTK_QT_VERSION=5
-- The C compiler identification is GNU 4.9.2
-- The CXX compiler identification is GNU 4.9.2
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found Tclsh: /usr/bin/tclsh (found version "8.6") 
-- Found TCL: /usr/lib/x86_64-linux-gnu/libtcl.so  
-- Found TCLTK: /usr/lib/x86_64-linux-gnu/libtcl.so  
-- Found TK: /usr/lib/x86_64-linux-gnu/libtk.so  
-- Found Java: /usr/lib/jvm/default-java/bin/java (found version "1.7.0.79") 
-- Found JNI: /usr/lib/jvm/default-java/jre/lib/amd64/libjawt.so  
-- Performing Test HAVE_GCC_ERROR_RETURN_TYPE
-- Performing Test HAVE_GCC_ERROR_RETURN_TYPE - Success
-- Performing Test HAVE_GCC_VISIBILITY
-- Performing Test HAVE_GCC_VISIBILITY - Success
-- Performing Test Support for 64 bit file systems
-- Performing Test Support for 64 bit file systems - Success
-- Performing Test VTK_CONST_REVERSE_ITERATOR_COMPARISON
-- Performing Test VTK_CONST_REVERSE_ITERATOR_COMPARISON - Success
-- Check if the system is big endian
-- Searching 16 bit integer
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of unsigned short
-- Check size of unsigned short - done
-- Using unsigned short
-- Check if the system is big endian - little endian
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Looking for C++ include iostream
-- Looking for C++ include iostream - found
-- Check for STD namespace
-- Check for STD namespace - found
-- Check for ANSI scope
-- Check for ANSI scope - found
-- Check for sstream
-- Check for sstream - found
-- Check size of int
-- Check size of int - done
-- Check size of long
-- Check size of long - done
-- Check size of char
-- Check size of char - done
-- Check size of short
-- Check size of short - done
-- Check size of float
-- Check size of float - done
-- Check size of double
-- Check size of double - done
-- Check size of long long
-- Check size of long long - done
-- Check size of __int64
-- Check size of __int64 - failed
-- Check size of uintptr_t
-- Check size of uintptr_t - done
-- Checking signedness of char
-- Checking signedness of char -- signed
-- Checking support for full template specialization syntax
-- Checking support for full template specialization syntax -- yes
-- Checking support for C++ explicit template instantiation
-- Checking support for C++ explicit template instantiation -- yes
-- Checking for builtin __sync_add_and_fetch
-- Checking for builtin __sync_add_and_fetch -- success
-- Checking ANSI streams end-of-file bug level
-- Checking ANSI streams end-of-file bug level - 1
-- Checking if ostream supports long long
-- Checking if ostream supports long long -- yes
-- Checking if istream supports long long
-- Checking if istream supports long long -- yes
-- Looking for getsockname in socket
-- Looking for getsockname in socket - not found
-- Checking for getsockname with socklen_t
-- Checking for getsockname with socklen_t -- yes
-- Looking for SO_REUSEADDR
-- Looking for SO_REUSEADDR - found
-- Group StandAlone modules: vtkChartsCore;vtkImagingStencil;vtkImagingMorphological;vtkImagingHybrid;vtkImagingGeneral;vtkImagingFourier;vtkImagingStatistics;vtkImagingCore;vtkImagingColor;vtkImagingSources;vtkImagingMath;vtkIOImage;vtkIOGeometry;vtkIOLSDyna;vtkIOXML;vtkIOLegacy;vtkIONetCDF;vtkIOMINC;vtkIOParallelXML;vtkIOParallel;vtkIOMovie;vtkIOImport;vtkIOEnSight;vtkIOSQL;vtkIOInfovis;vtkIOCore;vtkIOExodus;vtkIOPLY;vtkIOAMR;vtkIOXMLParser;vtkIOVideo;vtkCommonExecutionModel;vtkCommonSystem;vtkCommonMisc;vtkCommonCore;vtkCommonTransforms;vtkCommonComputationalGeometry;vtkParallelCore;vtkInfovisCore;vtkInfovisLayout;vtkFiltersProgrammable;vtkFiltersSMP;vtkFiltersHyperTree;vtkFiltersImaging;vtkFiltersGeometry;vtkFiltersExtraction;vtkFiltersGeneric;vtkFiltersSelection;vtkFiltersTexture;vtkFiltersHybrid;vtkFiltersParallel;vtkFiltersParallelImaging;vtkFiltersPython;vtkFiltersModeling;vtkFiltersGeneral;vtkFiltersFlowPaths;vtkFiltersStatistics;vtkFiltersVerdict;vtkFiltersCore;vtkFiltersAMR;vtkFiltersSources;vtkDomainsChemistry
-- Group Imaging modules: vtkImagingStencil;vtkImagingMorphological;vtkImagingHybrid;vtkImagingGeneral;vtkImagingFourier;vtkImagingStatistics;vtkImagingColor;vtkImagingSources;vtkImagingMath;vtkRenderingImage;vtkInteractionImage;vtkFiltersImaging
-- Group Rendering modules: vtkIOExport;vtkRenderingImage;vtkRenderingLIC;vtkRenderingFreeType;vtkRenderingContext2D;vtkRenderingVolume;vtkRenderingAnnotation;vtkRenderingCore;vtkRenderingLabel;vtkRenderingLOD;vtkGeovisCore;vtkInteractionImage;vtkInteractionStyle;vtkInteractionWidgets;vtkViewsContext2D;vtkViewsInfovis;vtkViewsCore
-- Group MPI modules: vtkIOMPIImage;vtkIOMPIParallel;vtkIOParallelNetCDF;vtkParallelMPI;vtkParallelMPI4Py;vtkFiltersParallelGeometry;vtkFiltersParallelMPI
-- Group Qt modules: vtkRenderingQt;vtkViewsQt;vtkGUISupportQt;vtkGUISupportQtOpenGL;vtkGUISupportQtSQL;vtkGUISupportQtWebkit
-- Group Tk modules: vtkRenderingTk
-- Group Views modules: vtkViewsContext2D;vtkViewsGeovis
-- Setting rendering backend to 'OpenGL' as none was specified.
-- Backend OpenGL modules: vtkRenderingOpenGL;vtkRenderingFreeTypeOpenGL;vtkRenderingContextOpenGL;vtkRenderingVolumeAMR;vtkRenderingVolumeOpenGL
-- Enabling modules for OpenGL.
-- Backend OpenGL2 modules: vtkRenderingOpenGL2;vtkRenderingVolumeOpenGL2;vtkRenderingContextOpenGL2;vtkRenderingFreeTypeOpenGL2;vtkDomainsChemistryOpenGL2
-- Enabled 158 modules:
--  * vtkChartsCore, requested by VTK_BUILD_ALL_MODULES.
--  * vtkCommonColor, requested by VTK_BUILD_ALL_MODULES.
--  * vtkCommonComputationalGeometry, requested by VTK_BUILD_ALL_MODULES.
--  * vtkCommonCore, requested by VTK_BUILD_ALL_MODULES.
--  * vtkCommonDataModel, requested by VTK_BUILD_ALL_MODULES.
--  * vtkCommonExecutionModel, requested by VTK_BUILD_ALL_MODULES.
--  * vtkCommonMath, requested by VTK_BUILD_ALL_MODULES.
--  * vtkCommonMisc, requested by VTK_BUILD_ALL_MODULES.
--  * vtkCommonSystem, requested by VTK_BUILD_ALL_MODULES.
--  * vtkCommonTransforms, requested by VTK_BUILD_ALL_MODULES.
--  * vtkDICOMParser, requested by VTK_BUILD_ALL_MODULES.
--  * vtkDomainsChemistry, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersAMR, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersCore, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersExtraction, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersFlowPaths, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersGeneral, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersGeneric, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersGeometry, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersHybrid, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersHyperTree, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersImaging, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersModeling, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersParallel, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersParallelFlowPaths, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersParallelGeometry, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersParallelImaging, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersParallelMPI, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersParallelStatistics, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersProgrammable, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersPython, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersReebGraph, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersSMP, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersSelection, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersSources, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersStatistics, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersTexture, requested by VTK_BUILD_ALL_MODULES.
--  * vtkFiltersVerdict, requested by VTK_BUILD_ALL_MODULES.
--  * vtkGUISupportQt, requested by VTK_BUILD_ALL_MODULES.
--  * vtkGUISupportQtOpenGL, requested by VTK_BUILD_ALL_MODULES.
--  * vtkGUISupportQtSQL, requested by VTK_BUILD_ALL_MODULES.
--  * vtkGUISupportQtWebkit, requested by VTK_BUILD_ALL_MODULES.
--  * vtkGeovisCore, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOAMR, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOCore, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOEnSight, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOExodus, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOExport, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOFFMPEG, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOGDAL, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOGeoJSON, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOGeometry, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOImage, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOImport, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOInfovis, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOLSDyna, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOLegacy, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOMINC, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOMPIImage, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOMPIParallel, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOMovie, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOMySQL, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIONetCDF, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOODBC, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOPLY, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOParallel, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOParallelExodus, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOParallelLSDyna, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOParallelNetCDF, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOParallelXML, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOPostgreSQL, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOSQL, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOVPIC, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOVideo, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOXML, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOXMLParser, requested by VTK_BUILD_ALL_MODULES.
--  * vtkIOXdmf2, requested by VTK_BUILD_ALL_MODULES.
--  * vtkImagingColor, requested by VTK_BUILD_ALL_MODULES.
--  * vtkImagingCore, requested by VTK_BUILD_ALL_MODULES.
--  * vtkImagingFourier, requested by VTK_BUILD_ALL_MODULES.
--  * vtkImagingGeneral, requested by VTK_BUILD_ALL_MODULES.
--  * vtkImagingHybrid, requested by VTK_BUILD_ALL_MODULES.
--  * vtkImagingMath, requested by VTK_BUILD_ALL_MODULES.
--  * vtkImagingMorphological, requested by VTK_BUILD_ALL_MODULES.
--  * vtkImagingSources, requested by VTK_BUILD_ALL_MODULES.
--  * vtkImagingStatistics, requested by VTK_BUILD_ALL_MODULES.
--  * vtkImagingStencil, requested by VTK_BUILD_ALL_MODULES.
--  * vtkInfovisBoost, requested by VTK_BUILD_ALL_MODULES.
--  * vtkInfovisBoostGraphAlgorithms, requested by VTK_BUILD_ALL_MODULES.
--  * vtkInfovisCore, requested by VTK_BUILD_ALL_MODULES.
--  * vtkInfovisLayout, requested by VTK_BUILD_ALL_MODULES.
--  * vtkInteractionImage, requested by VTK_BUILD_ALL_MODULES.
--  * vtkInteractionStyle, requested by VTK_BUILD_ALL_MODULES.
--  * vtkInteractionWidgets, requested by VTK_BUILD_ALL_MODULES.
--  * vtkMetaIO, requested by VTK_BUILD_ALL_MODULES.
--  * vtkParallelCore, requested by VTK_BUILD_ALL_MODULES.
--  * vtkParallelMPI, requested by VTK_BUILD_ALL_MODULES.
--  * vtkParallelMPI4Py, requested by VTK_BUILD_ALL_MODULES.
--  * vtkParseOGLExt, requested by VTK_BUILD_ALL_MODULES.
--  * vtkPython, requested by VTK_BUILD_ALL_MODULES.
--  * vtkPythonInterpreter, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingAnnotation, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingContext2D, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingContextOpenGL, needed by 3 modules:
        vtkRenderingContext2D
        vtkRenderingGL2PS
        vtkUtilitiesBenchmarks
--  * vtkRenderingCore, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingFreeType, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingFreeTypeFontConfig, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingFreeTypeOpenGL, needed by 2 modules:
        vtkRenderingCore
        vtkUtilitiesBenchmarks
--  * vtkRenderingGL2PS, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingImage, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingLIC, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingLOD, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingLabel, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingMatplotlib, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingOpenGL, needed by 13 modules:
        vtkGUISupportQt
        vtkGUISupportQtOpenGL
        vtkIOExport
        vtkRenderingContextOpenGL
        vtkRenderingCore
        vtkRenderingFreeTypeOpenGL
        vtkRenderingGL2PS
        vtkRenderingLIC
        vtkRenderingParallel
        vtkRenderingParallelLIC
        vtkRenderingTk
        vtkRenderingVolumeOpenGL
        vtkUtilitiesBenchmarks
--  * vtkRenderingParallel, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingParallelLIC, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingQt, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingTk, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingVolume, requested by VTK_BUILD_ALL_MODULES.
--  * vtkRenderingVolumeOpenGL, needed by 2 modules:
        vtkRenderingVolume
        vtkUtilitiesBenchmarks
--  * vtkTclTk, requested by VTK_BUILD_ALL_MODULES.
--  * vtkTestingCore, requested by VTK_BUILD_ALL_MODULES.
--  * vtkTestingGenericBridge, requested by VTK_BUILD_ALL_MODULES.
--  * vtkTestingIOSQL, requested by VTK_BUILD_ALL_MODULES.
--  * vtkTestingRendering, requested by VTK_BUILD_ALL_MODULES.
--  * vtkUtilitiesBenchmarks, requested by VTK_BUILD_ALL_MODULES.
--  * vtkUtilitiesEncodeString, requested by VTK_BUILD_ALL_MODULES.
--  * vtkUtilitiesHashSource, requested by VTK_BUILD_ALL_MODULES.
--  * vtkVPIC, requested by VTK_BUILD_ALL_MODULES.
--  * vtkViewsContext2D, requested by VTK_BUILD_ALL_MODULES.
--  * vtkViewsCore, requested by VTK_BUILD_ALL_MODULES.
--  * vtkViewsGeovis, requested by VTK_BUILD_ALL_MODULES.
--  * vtkViewsInfovis, requested by VTK_BUILD_ALL_MODULES.
--  * vtkViewsQt, requested by VTK_BUILD_ALL_MODULES.
--  * vtkWrappingTcl, requested by Module_vtkWrappingTcl.
--  * vtkWrappingTools, needed by 3 modules:
        vtkWrappingJava
        vtkWrappingPythonCore
        vtkWrappingTcl
--  * vtkalglib, requested by VTK_BUILD_ALL_MODULES.
--  * vtkexodusII, requested by VTK_BUILD_ALL_MODULES.
--  * vtkexpat, requested by VTK_BUILD_ALL_MODULES.
--  * vtkfreetype, requested by VTK_BUILD_ALL_MODULES.
--  * vtkftgl, requested by VTK_BUILD_ALL_MODULES.
--  * vtkgl2ps, requested by VTK_BUILD_ALL_MODULES.
--  * vtkglew, requested by VTK_BUILD_ALL_MODULES.
--  * vtkhdf5, requested by VTK_BUILD_ALL_MODULES.
--  * vtkjpeg, requested by VTK_BUILD_ALL_MODULES.
--  * vtkjsoncpp, requested by VTK_BUILD_ALL_MODULES.
--  * vtklibproj4, requested by VTK_BUILD_ALL_MODULES.
--  * vtklibxml2, requested by VTK_BUILD_ALL_MODULES.
--  * vtknetcdf, requested by VTK_BUILD_ALL_MODULES.
--  * vtkoggtheora, requested by VTK_BUILD_ALL_MODULES.
--  * vtkpng, requested by VTK_BUILD_ALL_MODULES.
--  * vtksqlite, requested by VTK_BUILD_ALL_MODULES.
--  * vtksys, requested by VTK_BUILD_ALL_MODULES.
--  * vtktiff, requested by VTK_BUILD_ALL_MODULES.
--  * vtkverdict, requested by VTK_BUILD_ALL_MODULES.
--  * vtkxdmf2, requested by VTK_BUILD_ALL_MODULES.
--  * vtkzlib, requested by VTK_BUILD_ALL_MODULES.
-- Checking whether header cstdio is available
-- Checking whether header cstdio is available - yes
-- Checking for Large File Support
-- Checking for Large File Support - yes
-- Checking whether STL classes are in std namespace
-- Checking whether STL classes are in std namespace - yes
-- Checking whether ANSI stream headers are available
-- Checking whether ANSI stream headers are available - yes
-- Checking whether ANSI streams are in std namespace
-- Checking whether ANSI streams are in std namespace - yes
-- Checking whether ANSI string stream is available
-- Checking whether ANSI string stream is available - yes
-- Checking whether header cstddef is available
-- Checking whether header cstddef is available - yes
-- Checking whether stl string has operator!= for char*
-- Checking whether stl string has operator!= for char* - yes
-- Checking whether stl has iterator_traits
-- Checking whether stl has iterator_traits - yes
-- Checking whether stl has standard template allocator
-- Checking whether stl has standard template allocator - yes
-- Checking for rebind member of stl allocator
-- Checking for rebind member of stl allocator - yes
-- Checking for non-standard argument to stl allocator<>::max_size
-- Checking for non-standard argument to stl allocator<>::max_size - no
-- Checking whether stl containers support allocator objects.
-- Checking whether stl containers support allocator objects. - yes
-- Checking whether ios has binary openmode
-- Checking whether ios has binary openmode - yes
-- Checking whether "<>" is needed for template friends
-- Checking whether "<>" is needed for template friends - yes
-- Checking for member template support
-- Checking for member template support - yes
-- Checking for standard template specialization syntax
-- Checking for standard template specialization syntax - yes
-- Checking whether argument dependent lookup is supported
-- Checking whether argument dependent lookup is supported - yes
-- Checking whether struct stat has st_mtim member
-- Checking whether struct stat has st_mtim member - yes
-- Checking whether C++ compiler has 'long long'
-- Checking whether C++ compiler has 'long long' - yes
-- Checking whether C++ compiler has '__int64'
-- Checking whether C++ compiler has '__int64' - no
-- Checking for C type size macros
-- Checking for C type size macros - compiled
-- Check size of char
-- Check size of char - done
-- Check size of __int64
-- Check size of __int64 - failed
-- Checking whether char is signed
-- Checking whether char is signed - yes
-- Checking whether wstring is available
-- Checking whether wstring is available - yes
-- Checking whether C compiler has ptrdiff_t in stddef.h
-- Checking whether C compiler has ptrdiff_t in stddef.h - yes
-- Checking whether C compiler has ssize_t in unistd.h
-- Checking whether C compiler has ssize_t in unistd.h - yes
-- Checking whether CXX compiler has setenv
-- Checking whether CXX compiler has setenv - yes
-- Checking whether CXX compiler has unsetenv
-- Checking whether CXX compiler has unsetenv - yes
-- Checking whether CXX compiler has environ in stdlib.h
-- Checking whether CXX compiler has environ in stdlib.h - no
-- Checking whether CXX compiler has utimes
-- Checking whether CXX compiler has utimes - yes
-- Checking whether CXX compiler has utimensat
-- Checking whether CXX compiler has utimensat - yes
-- Looking for include files sys/types.h, ifaddrs.h
-- Looking for include files sys/types.h, ifaddrs.h - found
-- Checking whether CXX compiler has rlimit64
-- Checking whether CXX compiler has rlimit64 - yes
-- Checking whether CXX compiler has atol
-- Checking whether CXX compiler has atol - yes
-- Checking whether CXX compiler has atoll
-- Checking whether CXX compiler has atoll - yes
-- Checking whether CXX compiler has _atoi64
-- Checking whether CXX compiler has _atoi64 - no
-- Looking for C++ include execinfo.h
-- Looking for C++ include execinfo.h - found
-- Checking whether backtrace works with this C++ compiler
-- Checking whether backtrace works with this C++ compiler - yes
-- Looking for C++ include dlfcn.h
-- Looking for C++ include dlfcn.h - found
-- Checking whether dladdr works with this C++ compiler
-- Checking whether dladdr works with this C++ compiler - yes
-- Looking for C++ include cxxabi.h
-- Looking for C++ include cxxabi.h - found
-- Checking whether cxxabi works with this C++ compiler
-- Checking whether cxxabi works with this C++ compiler - yes
-- Performing Test VTK_HAS_STD_ISNAN
-- Performing Test VTK_HAS_STD_ISNAN - Success
-- Performing Test VTK_HAS_STD_ISINF
-- Performing Test VTK_HAS_STD_ISINF - Success
-- Performing Test VTK_HAS_STD_ISFINITE
-- Performing Test VTK_HAS_STD_ISFINITE - Success
-- Looking for isnan
-- Looking for isnan - found
-- Looking for isinf
-- Looking for isinf - found
-- Looking for isfinite
-- Looking for isfinite - found
-- Looking for finite
-- Looking for finite - found
-- Looking for fenv.h
-- Looking for fenv.h - found
-- Looking for feenableexcept
-- Looking for feenableexcept - found
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
-- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.8") 
-- Found Freetype: /usr/lib/x86_64-linux-gnu/libfreetype.so (found version "2.5.2") 
-- Found OpenGL: /usr/lib/x86_64-linux-gnu/libGL.so  
-- Found JsonCpp: /usr/lib/x86_64-linux-gnu/libjsoncpp.so  
-- Found EXPAT: /usr/lib/x86_64-linux-gnu/libexpat.so (found version "2.1.0") 
-- Found MPI_C: /usr/lib/openmpi/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libhwloc.so  
-- Found MPI_CXX: /usr/lib/openmpi/lib/libmpi_cxx.so;/usr/lib/openmpi/lib/libmpi.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libhwloc.so  
-- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython2.7.so  
-- Boost version: 1.55.0
-- Found JPEG: /usr/lib/x86_64-linux-gnu/libjpeg.so  
-- Found PNG: /usr/lib/x86_64-linux-gnu/libpng.so (found version "1.2.50") 
-- Found TIFF: /usr/lib/x86_64-linux-gnu/libtiff.so (found version "4.0.3") 
-- Performing Test GLX_DEFINES_MACRO_GLX_VERSION_1_1
-- Performing Test GLX_DEFINES_MACRO_GLX_VERSION_1_1 - Success
-- Performing Test GLX_DEFINES_MACRO_GLX_VERSION_1_2
-- Performing Test GLX_DEFINES_MACRO_GLX_VERSION_1_2 - Success
-- Performing Test GLX_DEFINES_MACRO_GLX_VERSION_1_3
-- Performing Test GLX_DEFINES_MACRO_GLX_VERSION_1_3 - Success
-- Performing Test GLX_DEFINES_MACRO_GLX_VERSION_1_4
-- Performing Test GLX_DEFINES_MACRO_GLX_VERSION_1_4 - Success
-- Performing Test GLX_DEFINES_MACRO_GLX_ARB_get_proc_address
-- Performing Test GLX_DEFINES_MACRO_GLX_ARB_get_proc_address - Success
-- Performing Test GLX_INCLUDES_GLXEXT
-- Performing Test GLX_INCLUDES_GLXEXT - Success
-- Performing Test GLX_DEFINES_TYPE_GLXextFuncPtr
-- Performing Test GLX_DEFINES_TYPE_GLXextFuncPtr - Success
-- Performing Test GLX_DEFINES_TYPE_GLXextFuncPtr_AS_EMPTY
-- Performing Test GLX_DEFINES_TYPE_GLXextFuncPtr_AS_EMPTY - Failed
-- Performing Test GLX_DECLARES_FUNCTION_glXGetProcAddressARB
-- Performing Test GLX_DECLARES_FUNCTION_glXGetProcAddressARB - Success
-- Performing Test GLX_DECLARES_FUNCTION_glXGetProcAddress
-- Performing Test GLX_DECLARES_FUNCTION_glXGetProcAddress - Success
-- Performing Test GLX_DECLARES_FUNCTION_glXGetProcAddressARB_AS_EMPTY
-- Performing Test GLX_DECLARES_FUNCTION_glXGetProcAddressARB_AS_EMPTY - Failed
-- Performing Test GLX_DECLARES_FUNCTION_glXGetProcAddress_AS_EMPTY
-- Performing Test GLX_DECLARES_FUNCTION_glXGetProcAddress_AS_EMPTY - Failed
-- Performing Test GLX_DEFINES_TYPE_GLXFBConfig
-- Performing Test GLX_DEFINES_TYPE_GLXFBConfig - Success
-- GLX_DEFINES_MACRO_GLX_VERSION_1_1=1
-- GLX_DEFINES_MACRO_GLX_VERSION_1_2=1
-- GLX_DEFINES_MACRO_GLX_VERSION_1_3=1
-- GLX_DEFINES_MACRO_GLX_VERSION_1_4=1
-- GLX_DEFINES_MACRO_GLX_ARB_get_proc_address=1
-- GLX_INCLUDES_GLXEXT=1
-- GLX_USES_MACRO_GLX_GLXEXT_LEGACY=TRUE
-- GLX_DEFINES_TYPE_GLXextFuncPtr=1
-- GLX_DEFINES_TYPE_GLXextFuncPtr_AS_EMPTY=
-- GLX_DECLARES_FUNCTION_glXGetProcAddressARB=1
-- GLX_DECLARES_FUNCTION_glXGetProcAddress=1
-- GLX_DECLARES_FUNCTION_glXGetProcAddressARB_AS_EMPTY=
-- GLX_DECLARES_FUNCTION_glXGetProcAddress_AS_EMPTY=
-- GLX_DEFINES_TYPE_GLXFBConfig=1
-- Looking for glXGetProcAddressARB
-- Looking for glXGetProcAddressARB - found
-- Looking for glXGetProcAddressARB in GL/glx.h
-- Looking for glXGetProcAddressARB in GL/glx.h - TRUE
-- Looking for XOpenDisplay in /usr/lib/x86_64-linux-gnu/libX11.so;/usr/lib/x86_64-linux-gnu/libXext.so
-- Looking for XOpenDisplay in /usr/lib/x86_64-linux-gnu/libX11.so;/usr/lib/x86_64-linux-gnu/libXext.so - found
-- Looking for gethostbyname
-- Looking for gethostbyname - found
-- Looking for connect
-- Looking for connect - found
-- Looking for remove
-- Looking for remove - found
-- Looking for shmat
-- Looking for shmat - found
-- Looking for IceConnectionNumber in ICE
-- Looking for IceConnectionNumber in ICE - found
-- Found X11: /usr/lib/x86_64-linux-gnu/libX11.so
-- Looking for csin
-- Looking for csin - found
-- Looking for atanh
-- Looking for atanh - found
-- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/serial/lib/libhdf5.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/lib/libhdf5_hl.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/lib/libhdf5.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so  
-- Failed to find NetCDF interface for CXX
CMake Error at CMake/FindPackageHandleStandardArgs.cmake:97 (MESSAGE):
  Could NOT find NetCDF (missing: NETCDF_HAS_INTERFACES)
Call Stack (most recent call first):
  CMake/FindPackageHandleStandardArgs.cmake:288 (_FPHSA_FAILURE_MESSAGE)
  CMake/FindNetCDF.cmake:117 (find_package_handle_standard_args)
  CMake/vtkModuleMacros.cmake:830 (find_package)
  ThirdParty/netcdf/CMakeLists.txt:10 (vtk_module_third_party)


-- Configuring incomplete, errors occurred!
See also "/tmp/buildd/vtk6-6.2.0+dfsg1/debian/build/CMakeFiles/CMakeOutput.log".
See also "/tmp/buildd/vtk6-6.2.0+dfsg1/debian/build/CMakeFiles/CMakeError.log".
dh_auto_configure: cmake ../.. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_VERBOSE_MAKEFILE=ON -DBUILD_DOCUMENTATION=ON -DBUILD_EXAMPLES=ON -DBUILD_SHARED_LIBS=ON -DBUILD_TESTING=OFF -DVTK_USE_TK=ON -DVTK_WRAP_JAVA=ON -DVTK_WRAP_PYTHON=ON -DVTK_WRAP_TCL=ON -DVTK_USE_SYSTEM_EXPAT=ON -DVTK_USE_SYSTEM_FREETYPE=ON -DVTK_USE_SYSTEM_GL2PS=ON -DVTK_USE_SYSTEM_HDF5=ON -DVTK_USE_SYSTEM_JPEG=ON -DVTK_USE_SYSTEM_LIBXML2=ON -DVTK_USE_SYSTEM_OGGTHEORA=ON -DVTK_USE_SYSTEM_PNG=ON -DVTK_USE_SYSTEM_TIFF=ON -DVTK_USE_SYSTEM_ZLIB=ON -DVTK_USE_SYSTEM_JSONCPP=ON -DVTK_USE_SYSTEM_NETCDF=ON -DVTK_USE_SYSTEM_GLEW=ON -DVTK_EXTRA_COMPILER_WARNINGS=ON -DVTK_Group_Imaging=ON -DVTK_Group_MPI=ON -DVTK_Group_Qt=ON -DVTK_Group_Tk=ON -DVTK_Group_Views=ON -DVTK_BUILD_ALL_MODULES=ON -DMPI_CXX_INCLUDE_PATH=/usr/include/mpi -DVTK_INSTALL_LIBRARY_DIR=/usr/lib/x86_64-linux-gnu -DVTK_MAKE_INSTANTIATORS=ON -DCMAKE_EXE_LINKER_FLAGS=-Wl,--as-needed -DCMAKE_MODULE_LINKER_FLAGS=-Wl,--as-needed -DCMAKE_SHARED_LINKER_FLAGS=-Wl,--as-needed -DCMAKE_BUILD_TYPE=None -DVTK_USE_GCC_VISIBILITY=ON -DVTK_QT_VERSION=5 returned exit code 1
debian/rules:57: recipe for target 'override_dh_auto_configure' failed
make[1]: *** [override_dh_auto_configure] Error 2
make[1]: Leaving directory '/tmp/buildd/vtk6-6.2.0+dfsg1'
debian/rules:8: recipe for target 'build' failed
make: *** [build] Error 2
dpkg-buildpackage: error: debian/rules build gave error exit status 2
E: Failed autobuilding of package
W: no hooks of type C found -- ignoring
I: unmounting dev/pts filesystem
I: unmounting run/shm filesystem
I: unmounting proc filesystem
I: cleaning the build env 
I: removing directory /var/cache/pbuilder/build//31397 and its subdirectories


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